RNA–Protein interactions for RNA: ENST00000559754.1

SPG11-218, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 411 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-218ENST00000559754 FAM222BQ8WU58 562 aa3.24□□□□□ -1.89
SPG11-218ENST00000559754 SUSD6Q92537 303 aa3.24□□□□□ -1.89
SPG11-218ENST00000559754 GGHQ92820 318 aa3.24□□□□□ -1.89
SPG11-218ENST00000559754 DAZLQ92904 295 aaKnown RBP3.24□□□□□ -1.89
SPG11-218ENST00000559754 AGAP3Q96P47 875 aa3.24□□□□□ -1.89
SPG11-218ENST00000559754 COQ7Q99807 217 aa3.24□□□□□ -1.89
SPG11-218ENST00000559754 SYT15Q9BQS2 421 aa3.24□□□□□ -1.89
SPG11-218ENST00000559754 CABLES2Q9BTV7 478 aa3.24□□□□□ -1.89
SPG11-218ENST00000559754 ZNF416Q9BWM5 594 aa3.24□□□□□ -1.89
SPG11-218ENST00000559754 Q9H8V8 135 aa3.24□□□□□ -1.89
SPG11-218ENST00000559754 LRRC40Q9H9A6 602 aa3.24□□□□□ -1.89
SPG11-218ENST00000559754 VAT1LQ9HCJ6 419 aa3.24□□□□□ -1.89
SPG11-218ENST00000559754 PKD2L2Q9NZM6 624 aa3.24□□□□□ -1.89
SPG11-218ENST00000559754 CLIP2Q9UDT6 1046 aa3.24□□□□□ -1.89
SPG11-218ENST00000559754 NOCTQ9UK39 431 aaKnown RBP3.24□□□□□ -1.89
SPG11-218ENST00000559754 MGAT4BQ9UQ53 548 aa3.24□□□□□ -1.89
SPG11-218ENST00000559754 ENTPD4Q9Y227 616 aa3.24□□□□□ -1.89
SPG11-218ENST00000559754 RUVBL2Q9Y230 463 aaKnown RBP3.24□□□□□ -1.89
SPG11-218ENST00000559754 SH3GLB1Q9Y371 365 aa3.24□□□□□ -1.89
SPG11-218ENST00000559754 MFHAS1Q9Y4C4 1052 aa3.24□□□□□ -1.89
SPG11-218ENST00000559754 MAB21L2Q9Y586 359 aa3.24□□□□□ -1.89
SPG11-218ENST00000559754 NSD2O96028 1365 aa3.24□□□□□ -1.89
SPG11-218ENST00000559754 PCDH11YQ9BZA8 1340 aa3.23□□□□□ -1.89
SPG11-218ENST00000559754 A0A1W2PN81 502 aa3.23□□□□□ -1.89
SPG11-218ENST00000559754 SERINC4A6NH21 518 aa3.23□□□□□ -1.89
SPG11-218ENST00000559754 E9PQ18 207 aa3.23□□□□□ -1.89
SPG11-218ENST00000559754 ZNF197O14709 1029 aa3.23□□□□□ -1.89
SPG11-218ENST00000559754 MAPK13O15264 365 aa3.23□□□□□ -1.89
SPG11-218ENST00000559754 ATP6V0E1O15342 81 aa3.23□□□□□ -1.89
SPG11-218ENST00000559754 PSMD3O43242 534 aa3.23□□□□□ -1.89
SPG11-218ENST00000559754 TBX19O60806 448 aa3.23□□□□□ -1.89
SPG11-218ENST00000559754 RNASEH1O60930 286 aaKnown RBP3.23□□□□□ -1.89
SPG11-218ENST00000559754 ZFAND5O76080 213 aa3.23□□□□□ -1.89
SPG11-218ENST00000559754 MFN2O95140 757 aa3.23□□□□□ -1.89
SPG11-218ENST00000559754 PIGNO95427 931 aa3.23□□□□□ -1.89
SPG11-218ENST00000559754 SP9P0CG40 484 aa3.23□□□□□ -1.89
SPG11-218ENST00000559754 STAG3L1P0CL83 205 aa3.23□□□□□ -1.89
SPG11-218ENST00000559754 CALCBP10092 127 aa3.23□□□□□ -1.89
SPG11-218ENST00000559754 CYP2F1P24903 491 aa3.23□□□□□ -1.89
SPG11-218ENST00000559754 PTPN4P29074 926 aa3.23□□□□□ -1.89
SPG11-218ENST00000559754 MARCKSP29966 332 aaPredicted RBP3.23□□□□□ -1.89
SPG11-218ENST00000559754 HSPA1LP34931 641 aa3.23□□□□□ -1.89
SPG11-218ENST00000559754 CHRNA7P36544 502 aa3.23□□□□□ -1.89
SPG11-218ENST00000559754 PTGER3P43115 390 aa3.23□□□□□ -1.89
SPG11-218ENST00000559754 SLC8A3P57103 927 aa3.23□□□□□ -1.89
SPG11-218ENST00000559754 CDR2Q01850 454 aa3.23□□□□□ -1.89
SPG11-218ENST00000559754 PRKAA1Q13131 559 aa3.23□□□□□ -1.89
SPG11-218ENST00000559754 SNTB2Q13425 540 aaKnown RBP3.23□□□□□ -1.89
SPG11-218ENST00000559754 P2RY6Q15077 328 aa3.23□□□□□ -1.89
SPG11-218ENST00000559754 CA9Q16790 459 aa3.23□□□□□ -1.89
SPG11-218ENST00000559754 SLC36A3Q495N2 470 aa3.23□□□□□ -1.89
SPG11-218ENST00000559754 FILIP1LQ4L180 1135 aa3.23□□□□□ -1.89
SPG11-218ENST00000559754 TMEM41BQ5BJD5 291 aa3.23□□□□□ -1.89
SPG11-218ENST00000559754 CYP4A22Q5TCH4 519 aa3.23□□□□□ -1.89
SPG11-218ENST00000559754 CORO6Q6QEF8 472 aa3.23□□□□□ -1.89
SPG11-218ENST00000559754 ZYG11AQ6WRX3 759 aa3.23□□□□□ -1.89
SPG11-218ENST00000559754 SIGLEC15Q6ZMC9 328 aa3.23□□□□□ -1.89
SPG11-218ENST00000559754 RUFY3Q7L099 469 aa3.23□□□□□ -1.89
SPG11-218ENST00000559754 RTN4RL2Q86UN3 420 aa3.23□□□□□ -1.89
SPG11-218ENST00000559754 STHQ8IWL8 128 aa3.23□□□□□ -1.89
SPG11-218ENST00000559754 ZNF679Q8IYX0 411 aa3.23□□□□□ -1.89
SPG11-218ENST00000559754 THEM5Q8N1Q8 247 aa3.23□□□□□ -1.89
SPG11-218ENST00000559754 CPSF7Q8N684 471 aaKnown RBP3.23□□□□□ -1.89
SPG11-218ENST00000559754 FADS6Q8N9I5 356 aa3.23□□□□□ -1.89
SPG11-218ENST00000559754 TMEM178AQ8NBL3 297 aa3.23□□□□□ -1.89
SPG11-218ENST00000559754 MINDY2Q8NBR6 621 aa3.23□□□□□ -1.89
SPG11-218ENST00000559754 STEAP2Q8NFT2 490 aa3.23□□□□□ -1.89
SPG11-218ENST00000559754 RNF128Q8TEB7 428 aa3.23□□□□□ -1.89
SPG11-218ENST00000559754 ZNRF4Q8WWF5 429 aa3.23□□□□□ -1.89
SPG11-218ENST00000559754 HSD17B8Q92506 261 aa3.23□□□□□ -1.89
SPG11-218ENST00000559754 PIGBQ92521 554 aa3.23□□□□□ -1.89
SPG11-218ENST00000559754 PYCR2Q96C36 320 aa3.23□□□□□ -1.89
SPG11-218ENST00000559754 THOC1Q96FV9 657 aaKnown RBP3.23□□□□□ -1.89
SPG11-218ENST00000559754 C16orf58Q96GQ5 468 aa3.23□□□□□ -1.89
SPG11-218ENST00000559754 FAM71F1Q96KD3 344 aaPredicted RBP3.23□□□□□ -1.89
SPG11-218ENST00000559754 PRAC1Q96KF2 57 aa3.23□□□□□ -1.89
SPG11-218ENST00000559754 CFAP53Q96M91 514 aa3.23□□□□□ -1.89
SPG11-218ENST00000559754 TSSK2Q96PF2 358 aa3.23□□□□□ -1.89
SPG11-218ENST00000559754 ZSCAN5AQ9BUG6 496 aa3.23□□□□□ -1.89
SPG11-218ENST00000559754 FGFBP2Q9BYJ0 223 aa3.23□□□□□ -1.89
SPG11-218ENST00000559754 PUS3Q9BZE2 481 aaKnown RBP3.23□□□□□ -1.89
SPG11-218ENST00000559754 SIRPDQ9H106 197 aa3.23□□□□□ -1.89
SPG11-218ENST00000559754 ACTL8Q9H568 366 aa3.23□□□□□ -1.89
SPG11-218ENST00000559754 TMEM231Q9H6L2 316 aa3.23□□□□□ -1.89
SPG11-218ENST00000559754 COG4Q9H9E3 785 aa3.23□□□□□ -1.89
SPG11-218ENST00000559754 ACKR4Q9NPB9 350 aa3.23□□□□□ -1.89
SPG11-218ENST00000559754 GKN1Q9NS71 199 aa3.23□□□□□ -1.89
SPG11-218ENST00000559754 SMPD3Q9NY59 655 aaPredicted RBP3.23□□□□□ -1.89
SPG11-218ENST00000559754 RAI14Q9P0K7 980 aa3.23□□□□□ -1.89
SPG11-218ENST00000559754 ATXN10Q9UBB4 475 aa3.23□□□□□ -1.89
SPG11-218ENST00000559754 WDR83OSQ9Y284 106 aa3.23□□□□□ -1.89
SPG11-218ENST00000559754 CAB39Q9Y376 341 aaPredicted RBP3.23□□□□□ -1.89
SPG11-218ENST00000559754 SPIN1Q9Y657 262 aaPredicted RBP3.23□□□□□ -1.89
SPG11-218ENST00000559754 TP53BP1Q12888 1972 aaPredicted RBP3.23□□□□□ -1.89
SPG11-218ENST00000559754 TRAV18A0A075B6X5 111 aa3.22□□□□□ -1.89
SPG11-218ENST00000559754 C15orf38-AP3S2A0A0A6YYH1 394 aa3.22□□□□□ -1.89
SPG11-218ENST00000559754 XKRY2A2RUG3 117 aa3.22□□□□□ -1.89
SPG11-218ENST00000559754 C2orf81A6NN90 581 aa3.22□□□□□ -1.89
SPG11-218ENST00000559754 KLF11O14901 512 aa3.22□□□□□ -1.89
SPG11-218ENST00000559754 GPRIN2O60269 458 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms