RNA–Protein interactions for RNA: ENST00000559433.5

LRRC28-214, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-214ENST00000559433 CDCP1Q9H5V8 836 aa11.77□□□□□ -0.53
LRRC28-214ENST00000559433 KCMF1Q9P0J7 381 aa11.77□□□□□ -0.53
LRRC28-214ENST00000559433 PCTPQ9UKL6 214 aa11.77□□□□□ -0.53
LRRC28-214ENST00000559433 OSGIN2Q9Y236 505 aa11.77□□□□□ -0.53
LRRC28-214ENST00000559433 RNF11Q9Y3C5 154 aa11.77□□□□□ -0.53
LRRC28-214ENST00000559433 TSC22D4Q9Y3Q8 395 aa11.77□□□□□ -0.53
LRRC28-214ENST00000559433 TRBV11-1A0A0K0K1C0 115 aa11.76□□□□□ -0.53
LRRC28-214ENST00000559433 IQANK1A0A1B0GTG1 560 aa11.76□□□□□ -0.53
LRRC28-214ENST00000559433 SYNDIG1LA6NDD5 238 aa11.76□□□□□ -0.53
LRRC28-214ENST00000559433 OR7A17O14581 309 aa11.76□□□□□ -0.53
LRRC28-214ENST00000559433 CTNSO60931 367 aa11.76□□□□□ -0.53
LRRC28-214ENST00000559433 IFNA16P05015 189 aa11.76□□□□□ -0.53
LRRC28-214ENST00000559433 CD46P15529 392 aa11.76□□□□□ -0.53
LRRC28-214ENST00000559433 CPN2P22792 545 aa11.76□□□□□ -0.53
LRRC28-214ENST00000559433 PTX3P26022 381 aaPredicted RBP11.76□□□□□ -0.53
LRRC28-214ENST00000559433 TPP2P29144 1249 aaPredicted RBP11.76□□□□□ -0.53
LRRC28-214ENST00000559433 CD96P40200 585 aa11.76□□□□□ -0.53
LRRC28-214ENST00000559433 PER3P56645 1201 aa11.76□□□□□ -0.53
LRRC28-214ENST00000559433 RPS13P62277 151 aaKnown RBP11.76□□□□□ -0.53
LRRC28-214ENST00000559433 STX4Q12846 297 aa11.76□□□□□ -0.53
LRRC28-214ENST00000559433 SLC29A2Q14542 456 aa11.76□□□□□ -0.53
LRRC28-214ENST00000559433 OR1C1Q15619 314 aa11.76□□□□□ -0.53
LRRC28-214ENST00000559433 ZRSR2Q15696 482 aaKnown RBP11.76□□□□□ -0.53
LRRC28-214ENST00000559433 ZNF766Q5HY98 468 aa11.76□□□□□ -0.53
LRRC28-214ENST00000559433 DEPDC1Q5TB30 811 aa11.76□□□□□ -0.53
LRRC28-214ENST00000559433 OR4C11Q6IEV9 310 aa11.76□□□□□ -0.53
LRRC28-214ENST00000559433 RPS19BP1Q86WX3 136 aaKnown RBP11.76□□□□□ -0.53
LRRC28-214ENST00000559433 B3GNT7Q8NFL0 401 aa11.76□□□□□ -0.53
LRRC28-214ENST00000559433 OR52B6Q8NGF0 335 aa11.76□□□□□ -0.53
LRRC28-214ENST00000559433 NSUN5Q96P11 429 aaKnown RBP11.76□□□□□ -0.53
LRRC28-214ENST00000559433 SIGLEC12Q96PQ1 595 aa11.76□□□□□ -0.53
LRRC28-214ENST00000559433 TAAR6Q96RI8 345 aa11.76□□□□□ -0.53
LRRC28-214ENST00000559433 DEFB126Q9BYW3 111 aa11.76□□□□□ -0.53
LRRC28-214ENST00000559433 ADAP2Q9NPF8 381 aa11.76□□□□□ -0.53
LRRC28-214ENST00000559433 SEMA4BQ9NPR2 832 aaPredicted RBP11.76□□□□□ -0.53
LRRC28-214ENST00000559433 PSMC3IPQ9P2W1 217 aaPredicted RBP11.76□□□□□ -0.53
LRRC28-214ENST00000559433 FBXW2Q9UKT8 454 aa11.76□□□□□ -0.53
LRRC28-214ENST00000559433 CLDN16Q9Y5I7 305 aa11.76□□□□□ -0.53
LRRC28-214ENST00000559433 UTP20O75691 2785 aaKnown RBP11.75□□□□□ -0.53
LRRC28-214ENST00000559433 MYOCOSA0A1B0GUC4 107 aa11.75□□□□□ -0.53
LRRC28-214ENST00000559433 A8MT66 165 aa11.75□□□□□ -0.53
LRRC28-214ENST00000559433 PLPP1O14494 284 aa11.75□□□□□ -0.53
LRRC28-214ENST00000559433 FCHO1O14526 889 aa11.75□□□□□ -0.53
LRRC28-214ENST00000559433 LDB3O75112 727 aa11.75□□□□□ -0.53
LRRC28-214ENST00000559433 MLYCDO95822 493 aa11.75□□□□□ -0.53
LRRC28-214ENST00000559433 CLCN2P51788 898 aa11.75□□□□□ -0.53
LRRC28-214ENST00000559433 NEK2P51955 445 aa11.75□□□□□ -0.53
LRRC28-214ENST00000559433 MLF1P58340 268 aa11.75□□□□□ -0.53
LRRC28-214ENST00000559433 RBPJQ06330 500 aa11.75□□□□□ -0.53
LRRC28-214ENST00000559433 SLAMF1Q13291 335 aa11.75□□□□□ -0.53
LRRC28-214ENST00000559433 ELAVL1Q15717 326 aaKnown RBP11.75□□□□□ -0.53
LRRC28-214ENST00000559433 C4orf17Q53FE4 359 aa11.75□□□□□ -0.53
LRRC28-214ENST00000559433 TTC19Q6DKK2 380 aaPredicted RBP11.75□□□□□ -0.53
LRRC28-214ENST00000559433 SPINK14Q6IE38 97 aa11.75□□□□□ -0.53
LRRC28-214ENST00000559433 TIFABQ6ZNK6 161 aa11.75□□□□□ -0.53
LRRC28-214ENST00000559433 FAM98AQ8NCA5 519 aaKnown RBP11.75□□□□□ -0.53
LRRC28-214ENST00000559433 APCDD1LQ8NCL9 501 aa11.75□□□□□ -0.53
LRRC28-214ENST00000559433 MDS2Q8NDY4 140 aa11.75□□□□□ -0.53
LRRC28-214ENST00000559433 NCLNQ969V3 563 aa11.75□□□□□ -0.53
LRRC28-214ENST00000559433 MTFMTQ96DP5 389 aaKnown RBP11.75□□□□□ -0.53
LRRC28-214ENST00000559433 VMP1Q96GC9 406 aa11.75□□□□□ -0.53
LRRC28-214ENST00000559433 SLX1AQ9BQ83 275 aa11.75□□□□□ -0.53
LRRC28-214ENST00000559433 CCDC77Q9BR77 488 aa11.75□□□□□ -0.53
LRRC28-214ENST00000559433 ALOXE3Q9BYJ1 711 aa11.75□□□□□ -0.53
LRRC28-214ENST00000559433 EPB41L4BQ9H329 900 aa11.75□□□□□ -0.53
LRRC28-214ENST00000559433 L2HGDHQ9H9P8 463 aa11.75□□□□□ -0.53
LRRC28-214ENST00000559433 KLHL1Q9NR64 748 aa11.75□□□□□ -0.53
LRRC28-214ENST00000559433 FETUBQ9UGM5 382 aa11.75□□□□□ -0.53
LRRC28-214ENST00000559433 CLCA3PQ9Y6N3 262 aa11.75□□□□□ -0.53
LRRC28-214ENST00000559433 USP9YO00507 2555 aaPredicted RBP11.75□□□□□ -0.53
LRRC28-214ENST00000559433 SPTAN1Q13813 2472 aaKnown RBP11.75□□□□□ -0.53
LRRC28-214ENST00000559433 GOLGA8RI6L899 631 aa11.74□□□□□ -0.53
LRRC28-214ENST00000559433 FOXE1O00358 373 aaPredicted RBP11.74□□□□□ -0.53
LRRC28-214ENST00000559433 CDK2AP1O14519 115 aa11.74□□□□□ -0.53
LRRC28-214ENST00000559433 LRRTM2O43300 516 aa11.74□□□□□ -0.53
LRRC28-214ENST00000559433 ETHE1O95571 254 aa11.74□□□□□ -0.53
LRRC28-214ENST00000559433 RPS17P08708 135 aaKnown RBP11.74□□□□□ -0.53
LRRC28-214ENST00000559433 SBK3P0C264 359 aa11.74□□□□□ -0.53
LRRC28-214ENST00000559433 TNNI3P19429 210 aa11.74□□□□□ -0.53
LRRC28-214ENST00000559433 TAC1P20366 129 aa11.74□□□□□ -0.53
LRRC28-214ENST00000559433 CASP6P55212 293 aa11.74□□□□□ -0.53
LRRC28-214ENST00000559433 PMP22Q01453 160 aa11.74□□□□□ -0.53
LRRC28-214ENST00000559433 TNFRSF17Q02223 184 aa11.74□□□□□ -0.53
LRRC28-214ENST00000559433 ID2Q02363 134 aa11.74□□□□□ -0.53
LRRC28-214ENST00000559433 TRAF3Q13114 568 aa11.74□□□□□ -0.53
LRRC28-214ENST00000559433 CUL3Q13618 768 aa11.74□□□□□ -0.53
LRRC28-214ENST00000559433 SERTAD2Q14140 314 aa11.74□□□□□ -0.53
LRRC28-214ENST00000559433 FRG2Q64ET8 278 aa11.74□□□□□ -0.53
LRRC28-214ENST00000559433 ZNF324BQ6AW86 544 aaPredicted RBP11.74□□□□□ -0.53
LRRC28-214ENST00000559433 GFRALQ6UXV0 394 aa11.74□□□□□ -0.53
LRRC28-214ENST00000559433 RPS27LQ71UM5 84 aaKnown RBP11.74□□□□□ -0.53
LRRC28-214ENST00000559433 GPR180Q86V85 440 aa11.74□□□□□ -0.53
LRRC28-214ENST00000559433 LCA5Q86VQ0 697 aa11.74□□□□□ -0.53
LRRC28-214ENST00000559433 TMEM132CQ8N3T6 1108 aa11.74□□□□□ -0.53
LRRC28-214ENST00000559433 ZCCHC7Q8N3Z6 543 aaKnown RBP11.74□□□□□ -0.53
LRRC28-214ENST00000559433 EIF1ADQ8N9N8 165 aaKnown RBP11.74□□□□□ -0.53
LRRC28-214ENST00000559433 TMEM178AQ8NBL3 297 aa11.74□□□□□ -0.53
LRRC28-214ENST00000559433 C7orf57Q8NEG2 295 aa11.74□□□□□ -0.53
LRRC28-214ENST00000559433 WDR20Q8TBZ3 569 aa11.74□□□□□ -0.53
LRRC28-214ENST00000559433 ZNF483Q8TF39 744 aaPredicted RBP11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms