RNA–Protein interactions for RNA: ENST00000556897.5

HNRNPC-227, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HNRNPC, Length 1,252 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-227ENST00000556897 FAM167BQ9BTA0 163 aa8.35□□□□□ -1.07
HNRNPC-227ENST00000556897 TRIM54Q9BYV2 358 aa8.35□□□□□ -1.07
HNRNPC-227ENST00000556897 ADAP2Q9NPF8 381 aa8.35□□□□□ -1.07
HNRNPC-227ENST00000556897 IARS2Q9NSE4 1012 aaKnown RBP8.35□□□□□ -1.07
HNRNPC-227ENST00000556897 SACM1LQ9NTJ5 587 aa8.35□□□□□ -1.07
HNRNPC-227ENST00000556897 TRMT1Q9NXH9 659 aaKnown RBP8.35□□□□□ -1.07
HNRNPC-227ENST00000556897 TUBA8Q9NY65 449 aaPredicted RBP8.35□□□□□ -1.07
HNRNPC-227ENST00000556897 SPRR3Q9UBC9 169 aa8.35□□□□□ -1.07
HNRNPC-227ENST00000556897 B4GALT7Q9UBV7 327 aa8.35□□□□□ -1.07
HNRNPC-227ENST00000556897 GUCA1BQ9UMX6 200 aa8.35□□□□□ -1.07
HNRNPC-227ENST00000556897 CLCA3PQ9Y6N3 262 aa8.35□□□□□ -1.07
HNRNPC-227ENST00000556897 MYOCOSA0A1B0GUC4 107 aa8.34□□□□□ -1.07
HNRNPC-227ENST00000556897 HSPB2A8KAH6 182 aa8.34□□□□□ -1.07
HNRNPC-227ENST00000556897 ERI3O43414 337 aaKnown RBP8.34□□□□□ -1.07
HNRNPC-227ENST00000556897 P04436 131 aa8.34□□□□□ -1.07
HNRNPC-227ENST00000556897 GABRA1P14867 456 aa8.34□□□□□ -1.07
HNRNPC-227ENST00000556897 HNRNPH1P31943 449 aaKnown RBP8.34□□□□□ -1.07
HNRNPC-227ENST00000556897 PIGAP37287 484 aa8.34□□□□□ -1.07
HNRNPC-227ENST00000556897 WNT3P56703 355 aa8.34□□□□□ -1.07
HNRNPC-227ENST00000556897 RAB38P57729 211 aa8.34□□□□□ -1.07
HNRNPC-227ENST00000556897 IL2P60568 153 aa8.34□□□□□ -1.07
HNRNPC-227ENST00000556897 STXBP1P61764 594 aaKnown RBP8.34□□□□□ -1.07
HNRNPC-227ENST00000556897 RNF4P78317 190 aa8.34□□□□□ -1.07
HNRNPC-227ENST00000556897 CCZ1BP86790 482 aa8.34□□□□□ -1.07
HNRNPC-227ENST00000556897 CCZ1P86791 482 aaPredicted RBP8.34□□□□□ -1.07
HNRNPC-227ENST00000556897 ELAVL1Q15717 326 aaKnown RBP8.34□□□□□ -1.07
HNRNPC-227ENST00000556897 HSPB2Q16082 182 aa8.34□□□□□ -1.07
HNRNPC-227ENST00000556897 FBXW10Q5XX13 1052 aa8.34□□□□□ -1.07
HNRNPC-227ENST00000556897 NXPE4Q6UWF7 544 aa8.34□□□□□ -1.07
HNRNPC-227ENST00000556897 CLEC9AQ6UXN8 241 aa8.34□□□□□ -1.07
HNRNPC-227ENST00000556897 THOC6Q86W42 341 aaKnown RBP8.34□□□□□ -1.07
HNRNPC-227ENST00000556897 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.34□□□□□ -1.07
HNRNPC-227ENST00000556897 TMEM132CQ8N3T6 1108 aa8.34□□□□□ -1.07
HNRNPC-227ENST00000556897 ZNF321PQ8N8H1 164 aa8.34□□□□□ -1.07
HNRNPC-227ENST00000556897 C2CD4AQ8NCU7 369 aaPredicted RBP8.34□□□□□ -1.07
HNRNPC-227ENST00000556897 NAXEQ8NCW5 288 aa8.34□□□□□ -1.07
HNRNPC-227ENST00000556897 MCUQ8NE86 351 aa8.34□□□□□ -1.07
HNRNPC-227ENST00000556897 PTPMT1Q8WUK0 201 aaPredicted RBP8.34□□□□□ -1.07
HNRNPC-227ENST00000556897 ATL1Q8WXF7 558 aa8.34□□□□□ -1.07
HNRNPC-227ENST00000556897 RNASE6Q93091 150 aaKnown RBP8.34□□□□□ -1.07
HNRNPC-227ENST00000556897 CAPZA3Q96KX2 299 aa8.34□□□□□ -1.07
HNRNPC-227ENST00000556897 CSF3RQ99062 836 aa8.34□□□□□ -1.07
HNRNPC-227ENST00000556897 SH3GL2Q99962 352 aa8.34□□□□□ -1.07
HNRNPC-227ENST00000556897 OR8D2Q9GZM6 311 aa8.34□□□□□ -1.07
HNRNPC-227ENST00000556897 PELI2Q9HAT8 420 aa8.34□□□□□ -1.07
HNRNPC-227ENST00000556897 XAB2Q9HCS7 855 aaKnown RBP8.34□□□□□ -1.07
HNRNPC-227ENST00000556897 IKZF3Q9UKT9 509 aa8.34□□□□□ -1.07
HNRNPC-227ENST00000556897 SLC22A14Q9Y267 594 aa8.34□□□□□ -1.07
HNRNPC-227ENST00000556897 DYRK1BQ9Y463 629 aa8.34□□□□□ -1.07
HNRNPC-227ENST00000556897 ATG4BQ9Y4P1 393 aa8.34□□□□□ -1.07
HNRNPC-227ENST00000556897 KCNE2Q9Y6J6 123 aa8.34□□□□□ -1.07
HNRNPC-227ENST00000556897 ARHGAP21Q5T5U3 1957 aa8.33□□□□□ -1.08
HNRNPC-227ENST00000556897 RTTNQ86VV8 2226 aa8.33□□□□□ -1.08
HNRNPC-227ENST00000556897 LRIT2A6NDA9 550 aa8.33□□□□□ -1.08
HNRNPC-227ENST00000556897 TUBAL3A6NHL2 446 aa8.33□□□□□ -1.08
HNRNPC-227ENST00000556897 CYR61O00622 381 aa8.33□□□□□ -1.08
HNRNPC-227ENST00000556897 DVL2O14641 736 aa8.33□□□□□ -1.08
HNRNPC-227ENST00000556897 B3GALT2O43825 422 aa8.33□□□□□ -1.08
HNRNPC-227ENST00000556897 HCN1O60741 890 aa8.33□□□□□ -1.08
HNRNPC-227ENST00000556897 KRT14P02533 472 aa8.33□□□□□ -1.08
HNRNPC-227ENST00000556897 NUDT7P0C024 238 aa8.33□□□□□ -1.08
HNRNPC-227ENST00000556897 RFPL3SP0C7P2 107 aa8.33□□□□□ -1.08
HNRNPC-227ENST00000556897 HOXB1P14653 301 aaPredicted RBP8.33□□□□□ -1.08
HNRNPC-227ENST00000556897 TACR1P25103 407 aa8.33□□□□□ -1.08
HNRNPC-227ENST00000556897 HOXC12P31275 282 aa8.33□□□□□ -1.08
HNRNPC-227ENST00000556897 MAGEA3P43357 314 aa8.33□□□□□ -1.08
HNRNPC-227ENST00000556897 ASCL1P50553 236 aa8.33□□□□□ -1.08
HNRNPC-227ENST00000556897 PLA2G16P53816 162 aa8.33□□□□□ -1.08
HNRNPC-227ENST00000556897 STX4Q12846 297 aa8.33□□□□□ -1.08
HNRNPC-227ENST00000556897 DAZAP2Q15038 168 aaPredicted RBP8.33□□□□□ -1.08
HNRNPC-227ENST00000556897 BBS9Q3SYG4 887 aa8.33□□□□□ -1.08
HNRNPC-227ENST00000556897 OPN5Q6U736 354 aa8.33□□□□□ -1.08
HNRNPC-227ENST00000556897 SBSNQ6UWP8 590 aa8.33□□□□□ -1.08
HNRNPC-227ENST00000556897 CHSY3Q70JA7 882 aa8.33□□□□□ -1.08
HNRNPC-227ENST00000556897 KRTAP1-3Q8IUG1 177 aa8.33□□□□□ -1.08
HNRNPC-227ENST00000556897 ZNF595Q8IYB9 648 aa8.33□□□□□ -1.08
HNRNPC-227ENST00000556897 KLHDC8AQ8IYD2 350 aa8.33□□□□□ -1.08
HNRNPC-227ENST00000556897 ULK2Q8IYT8 1036 aa8.33□□□□□ -1.08
HNRNPC-227ENST00000556897 MORN4Q8NDC4 146 aa8.33□□□□□ -1.08
HNRNPC-227ENST00000556897 TNIP2Q8NFZ5 429 aa8.33□□□□□ -1.08
HNRNPC-227ENST00000556897 MAIP1Q8WWC4 291 aa8.33□□□□□ -1.08
HNRNPC-227ENST00000556897 CCT6BQ92526 530 aa8.33□□□□□ -1.08
HNRNPC-227ENST00000556897 DAZLQ92904 295 aaKnown RBP8.33□□□□□ -1.08
HNRNPC-227ENST00000556897 GAL3ST3Q96A11 431 aa8.33□□□□□ -1.08
HNRNPC-227ENST00000556897 MS4A6EQ96DS6 147 aa8.33□□□□□ -1.08
HNRNPC-227ENST00000556897 ARSGQ96EG1 525 aa8.33□□□□□ -1.08
HNRNPC-227ENST00000556897 LRRC46Q96FV0 321 aa8.33□□□□□ -1.08
HNRNPC-227ENST00000556897 SIGLEC10Q96LC7 697 aa8.33□□□□□ -1.08
HNRNPC-227ENST00000556897 MDFIQ99750 246 aa8.33□□□□□ -1.08
HNRNPC-227ENST00000556897 NPLQ9BXD5 320 aaPredicted RBP8.33□□□□□ -1.08
HNRNPC-227ENST00000556897 ALOXE3Q9BYJ1 711 aa8.33□□□□□ -1.08
HNRNPC-227ENST00000556897 SLC6A15Q9H2J7 730 aa8.33□□□□□ -1.08
HNRNPC-227ENST00000556897 ZNF703Q9H7S9 590 aaPredicted RBP8.33□□□□□ -1.08
HNRNPC-227ENST00000556897 VTI1BQ9UEU0 232 aa8.33□□□□□ -1.08
HNRNPC-227ENST00000556897 MRPS33Q9Y291 106 aaKnown RBP8.33□□□□□ -1.08
HNRNPC-227ENST00000556897 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.33□□□□□ -1.08
HNRNPC-227ENST00000556897 ARID1AO14497 2285 aa8.33□□□□□ -1.08
HNRNPC-227ENST00000556897 A0A088AWK7 358 aa8.32□□□□□ -1.08
HNRNPC-227ENST00000556897 KIAA1324LA8MWY0 1029 aaPredicted RBP8.32□□□□□ -1.08
HNRNPC-227ENST00000556897 C17orf105B2RV13 164 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms