RNA–Protein interactions for RNA: ENST00000556310.1

SLIRP-205, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-205ENST00000556310 BLACEA4D250 179 aa10.8□□□□□ -0.68
SLIRP-205ENST00000556310 SMIM23A6NLE4 172 aa10.8□□□□□ -0.68
SLIRP-205ENST00000556310 FOXE1O00358 373 aaPredicted RBP10.8□□□□□ -0.68
SLIRP-205ENST00000556310 SAP18O00422 153 aaKnown RBP10.8□□□□□ -0.68
SLIRP-205ENST00000556310 PLPP1O14494 284 aa10.8□□□□□ -0.68
SLIRP-205ENST00000556310 DLX3O60479 287 aa10.8□□□□□ -0.68
SLIRP-205ENST00000556310 SEMA3DO95025 777 aa10.8□□□□□ -0.68
SLIRP-205ENST00000556310 NUDT17P0C025 328 aa10.8□□□□□ -0.68
SLIRP-205ENST00000556310 KRT15P19012 456 aa10.8□□□□□ -0.68
SLIRP-205ENST00000556310 PTX3P26022 381 aaPredicted RBP10.8□□□□□ -0.68
SLIRP-205ENST00000556310 TAS2R50P59544 299 aa10.8□□□□□ -0.68
SLIRP-205ENST00000556310 ARG2P78540 354 aa10.8□□□□□ -0.68
SLIRP-205ENST00000556310 ZNF33BQ06732 778 aa10.8□□□□□ -0.68
SLIRP-205ENST00000556310 SLC13A2Q13183 592 aa10.8□□□□□ -0.68
SLIRP-205ENST00000556310 CUL3Q13618 768 aa10.8□□□□□ -0.68
SLIRP-205ENST00000556310 ZNF169Q14929 603 aaPredicted RBP10.8□□□□□ -0.68
SLIRP-205ENST00000556310 TLR1Q15399 786 aa10.8□□□□□ -0.68
SLIRP-205ENST00000556310 INPP5JQ15735 1006 aaPredicted RBP10.8□□□□□ -0.68
SLIRP-205ENST00000556310 IGFBP7Q16270 282 aa10.8□□□□□ -0.68
SLIRP-205ENST00000556310 FRG2Q64ET8 278 aa10.8□□□□□ -0.68
SLIRP-205ENST00000556310 OR4C11Q6IEV9 310 aa10.8□□□□□ -0.68
SLIRP-205ENST00000556310 EMBQ6PCB8 327 aa10.8□□□□□ -0.68
SLIRP-205ENST00000556310 RPS27LQ71UM5 84 aaKnown RBP10.8□□□□□ -0.68
SLIRP-205ENST00000556310 SLC22A9Q8IVM8 553 aa10.8□□□□□ -0.68
SLIRP-205ENST00000556310 CYP4X1Q8N118 509 aa10.8□□□□□ -0.68
SLIRP-205ENST00000556310 LGI4Q8N135 537 aa10.8□□□□□ -0.68
SLIRP-205ENST00000556310 ZCCHC7Q8N3Z6 543 aaKnown RBP10.8□□□□□ -0.68
SLIRP-205ENST00000556310 AMER2Q8N7J2 671 aa10.8□□□□□ -0.68
SLIRP-205ENST00000556310 OR4F6Q8NGB9 312 aa10.8□□□□□ -0.68
SLIRP-205ENST00000556310 DNAJB14Q8TBM8 379 aa10.8□□□□□ -0.68
SLIRP-205ENST00000556310 AENQ8WTP8 325 aaKnown RBP10.8□□□□□ -0.68
SLIRP-205ENST00000556310 TMEM237Q96Q45 408 aa10.8□□□□□ -0.68
SLIRP-205ENST00000556310 FRG2BQ96QU4 278 aa10.8□□□□□ -0.68
SLIRP-205ENST00000556310 MAPKAP1Q9BPZ7 522 aa10.8□□□□□ -0.68
SLIRP-205ENST00000556310 KCNK13Q9HB14 408 aa10.8□□□□□ -0.68
SLIRP-205ENST00000556310 KCMF1Q9P0J7 381 aa10.8□□□□□ -0.68
SLIRP-205ENST00000556310 PHF11Q9UIL8 331 aa10.8□□□□□ -0.68
SLIRP-205ENST00000556310 CLDN16Q9Y5I7 305 aa10.8□□□□□ -0.68
SLIRP-205ENST00000556310 RELNP78509 3460 aa10.8□□□□□ -0.68
SLIRP-205ENST00000556310 ASH1LQ9NR48 2969 aaKnown RBP10.79□□□□□ -0.68
SLIRP-205ENST00000556310 TGFBR3LH3BV60 316 aa10.79□□□□□ -0.68
SLIRP-205ENST00000556310 CTNSO60931 367 aa10.79□□□□□ -0.68
SLIRP-205ENST00000556310 ETHE1O95571 254 aa10.79□□□□□ -0.68
SLIRP-205ENST00000556310 TNFSF10P50591 281 aa10.79□□□□□ -0.68
SLIRP-205ENST00000556310 NEK2P51955 445 aa10.79□□□□□ -0.68
SLIRP-205ENST00000556310 PRKAA2P54646 552 aa10.79□□□□□ -0.68
SLIRP-205ENST00000556310 CDH13P55290 713 aa10.79□□□□□ -0.68
SLIRP-205ENST00000556310 CLCQ05315 142 aa10.79□□□□□ -0.68
SLIRP-205ENST00000556310 IFT88Q13099 833 aa10.79□□□□□ -0.68
SLIRP-205ENST00000556310 ZNF678Q5SXM1 525 aa10.79□□□□□ -0.68
SLIRP-205ENST00000556310 TTC19Q6DKK2 380 aaPredicted RBP10.79□□□□□ -0.68
SLIRP-205ENST00000556310 LETMD1Q6P1Q0 360 aa10.79□□□□□ -0.68
SLIRP-205ENST00000556310 SH2D5Q6ZV89 423 aa10.79□□□□□ -0.68
SLIRP-205ENST00000556310 MILR1Q7Z6M3 343 aa10.79□□□□□ -0.68
SLIRP-205ENST00000556310 CLNKQ7Z7G1 428 aa10.79□□□□□ -0.68
SLIRP-205ENST00000556310 NUDT13Q86X67 352 aa10.79□□□□□ -0.68
SLIRP-205ENST00000556310 RIBC1Q8N443 379 aaPredicted RBP10.79□□□□□ -0.68
SLIRP-205ENST00000556310 SLC5A8Q8N695 610 aa10.79□□□□□ -0.68
SLIRP-205ENST00000556310 GALNT11Q8NCW6 608 aa10.79□□□□□ -0.68
SLIRP-205ENST00000556310 NFAM1Q8NET5 270 aaPredicted RBP10.79□□□□□ -0.68
SLIRP-205ENST00000556310 MYRIPQ8NFW9 859 aa10.79□□□□□ -0.68
SLIRP-205ENST00000556310 ELP5Q8TE02 316 aa10.79□□□□□ -0.68
SLIRP-205ENST00000556310 HAS2Q92819 552 aa10.79□□□□□ -0.68
SLIRP-205ENST00000556310 CAVIN3Q969G5 261 aa10.79□□□□□ -0.68
SLIRP-205ENST00000556310 CCDC126Q96EE4 140 aa10.79□□□□□ -0.68
SLIRP-205ENST00000556310 L3HYPDHQ96EM0 354 aa10.79□□□□□ -0.68
SLIRP-205ENST00000556310 ZNF354BQ96LW1 612 aa10.79□□□□□ -0.68
SLIRP-205ENST00000556310 ZNF382Q96SR6 550 aa10.79□□□□□ -0.68
SLIRP-205ENST00000556310 SERPINI1Q99574 410 aa10.79□□□□□ -0.68
SLIRP-205ENST00000556310 SORBS1Q9BX66 1292 aaKnown RBP10.79□□□□□ -0.68
SLIRP-205ENST00000556310 ZNF717Q9BY31 904 aaPredicted RBP10.79□□□□□ -0.68
SLIRP-205ENST00000556310 SLC29A3Q9BZD2 475 aa10.79□□□□□ -0.68
SLIRP-205ENST00000556310 ELOVL6Q9H5J4 265 aa10.79□□□□□ -0.68
SLIRP-205ENST00000556310 ADAP2Q9NPF8 381 aa10.79□□□□□ -0.68
SLIRP-205ENST00000556310 MS4A12Q9NXJ0 267 aa10.79□□□□□ -0.68
SLIRP-205ENST00000556310 PLA2G3Q9NZ20 509 aa10.79□□□□□ -0.68
SLIRP-205ENST00000556310 ABI3Q9P2A4 366 aa10.79□□□□□ -0.68
SLIRP-205ENST00000556310 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.79□□□□□ -0.68
SLIRP-205ENST00000556310 TRPS1Q9UHF7 1281 aa10.79□□□□□ -0.68
SLIRP-205ENST00000556310 FBXW2Q9UKT8 454 aa10.79□□□□□ -0.68
SLIRP-205ENST00000556310 EMCNQ9ULC0 261 aa10.79□□□□□ -0.68
SLIRP-205ENST00000556310 STK38LQ9Y2H1 464 aa10.79□□□□□ -0.68
SLIRP-205ENST00000556310 V9GYY5 206 aaPredicted RBP10.79□□□□□ -0.68
SLIRP-205ENST00000556310 USP9XQ93008 2570 aaPredicted RBP10.79□□□□□ -0.68
SLIRP-205ENST00000556310 PTPN13Q12923 2485 aa10.79□□□□□ -0.68
SLIRP-205ENST00000556310 A0A0A6YYD5 115 aa10.78□□□□□ -0.68
SLIRP-205ENST00000556310 TRAV17A0A0B4J275 112 aa10.78□□□□□ -0.68
SLIRP-205ENST00000556310 A0A1B0GTL3 188 aa10.78□□□□□ -0.68
SLIRP-205ENST00000556310 OR5H15A6NDH6 313 aa10.78□□□□□ -0.68
SLIRP-205ENST00000556310 A8MUI8 341 aa10.78□□□□□ -0.68
SLIRP-205ENST00000556310 FOXO6A8MYZ6 492 aa10.78□□□□□ -0.68
SLIRP-205ENST00000556310 VPS4BO75351 444 aa10.78□□□□□ -0.68
SLIRP-205ENST00000556310 MYO1DO94832 1006 aa10.78□□□□□ -0.68
SLIRP-205ENST00000556310 SUPT7LO94864 414 aa10.78□□□□□ -0.68
SLIRP-205ENST00000556310 MLYCDO95822 493 aa10.78□□□□□ -0.68
SLIRP-205ENST00000556310 WDPCPO95876 746 aa10.78□□□□□ -0.68
SLIRP-205ENST00000556310 PROCP04070 461 aa10.78□□□□□ -0.68
SLIRP-205ENST00000556310 TSPAN8P19075 237 aa10.78□□□□□ -0.68
SLIRP-205ENST00000556310 IMPDH1P20839 514 aa10.78□□□□□ -0.68
SLIRP-205ENST00000556310 CPN2P22792 545 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms