RNA–Protein interactions for RNA: ENST00000556102.6

CDKN3-209, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 938 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-209ENST00000556102 GPR22Q99680 433 aa17.48■□□□□ 0.39
CDKN3-209ENST00000556102 NAPGQ99747 312 aaPredicted RBP17.48■□□□□ 0.39
CDKN3-209ENST00000556102 ALOXE3Q9BYJ1 711 aa17.48■□□□□ 0.39
CDKN3-209ENST00000556102 ROGDIQ9GZN7 287 aa17.48■□□□□ 0.39
CDKN3-209ENST00000556102 LIN28AQ9H9Z2 209 aaKnown RBP17.48■□□□□ 0.39
CDKN3-209ENST00000556102 LYRM4Q9HD34 91 aa17.48■□□□□ 0.39
CDKN3-209ENST00000556102 PRDM7Q9NQW5 492 aa17.48■□□□□ 0.39
CDKN3-209ENST00000556102 TXNDC16Q9P2K2 825 aa17.48■□□□□ 0.39
CDKN3-209ENST00000556102 VTI1BQ9UEU0 232 aa17.48■□□□□ 0.39
CDKN3-209ENST00000556102 CXorf49A8MYA2 514 aaPredicted RBP17.47■□□□□ 0.39
CDKN3-209ENST00000556102 ACOT7O00154 380 aa17.47■□□□□ 0.39
CDKN3-209ENST00000556102 PDE9AO76083 593 aa17.47■□□□□ 0.39
CDKN3-209ENST00000556102 OR6B1O95007 311 aa17.47■□□□□ 0.39
CDKN3-209ENST00000556102 STMN1P16949 149 aa17.47■□□□□ 0.39
CDKN3-209ENST00000556102 SSTR1P30872 391 aa17.47■□□□□ 0.39
CDKN3-209ENST00000556102 SOX3P41225 446 aa17.47■□□□□ 0.39
CDKN3-209ENST00000556102 PAFAH1B1P43034 410 aa17.47■□□□□ 0.39
CDKN3-209ENST00000556102 HK2P52789 917 aa17.47■□□□□ 0.39
CDKN3-209ENST00000556102 KRTAP10-9P60411 292 aa17.47■□□□□ 0.39
CDKN3-209ENST00000556102 PLGLB1Q02325 96 aa17.47■□□□□ 0.39
CDKN3-209ENST00000556102 TLE4Q04727 773 aa17.47■□□□□ 0.39
CDKN3-209ENST00000556102 STX4Q12846 297 aa17.47■□□□□ 0.39
CDKN3-209ENST00000556102 OR4D1Q15615 310 aa17.47■□□□□ 0.39
CDKN3-209ENST00000556102 RGS9BPQ6ZS82 235 aa17.47■□□□□ 0.39
CDKN3-209ENST00000556102 SRFBP1Q8NEF9 429 aaKnown RBP17.47■□□□□ 0.39
CDKN3-209ENST00000556102 OR2M7Q8NG81 312 aa17.47■□□□□ 0.39
CDKN3-209ENST00000556102 PTPMT1Q8WUK0 201 aaPredicted RBP17.47■□□□□ 0.39
CDKN3-209ENST00000556102 KRT12Q99456 494 aa17.47■□□□□ 0.39
CDKN3-209ENST00000556102 RBBP8Q99708 897 aa17.47■□□□□ 0.39
CDKN3-209ENST00000556102 CPNE1Q99829 537 aa17.47■□□□□ 0.39
CDKN3-209ENST00000556102 DEFB127Q9H1M4 99 aa17.47■□□□□ 0.39
CDKN3-209ENST00000556102 MCCC2Q9HCC0 563 aa17.47■□□□□ 0.39
CDKN3-209ENST00000556102 CD274Q9NZQ7 290 aa17.47■□□□□ 0.39
CDKN3-209ENST00000556102 PTBP2Q9UKA9 531 aaKnown RBP17.47■□□□□ 0.39
CDKN3-209ENST00000556102 ITGB1BP2Q9UKP3 347 aa17.47■□□□□ 0.39
CDKN3-209ENST00000556102 MYOCOSA0A1B0GUC4 107 aa17.46■□□□□ 0.39
CDKN3-209ENST00000556102 PINLYPA6NC86 204 aa17.46■□□□□ 0.39
CDKN3-209ENST00000556102 WWP2O00308 870 aa17.46■□□□□ 0.39
CDKN3-209ENST00000556102 EPORP19235 508 aa17.46■□□□□ 0.39
CDKN3-209ENST00000556102 CHRNB4P30926 498 aa17.46■□□□□ 0.39
CDKN3-209ENST00000556102 GP5P40197 560 aa17.46■□□□□ 0.39
CDKN3-209ENST00000556102 PPIAP62937 165 aaKnown RBP17.46■□□□□ 0.39
CDKN3-209ENST00000556102 IRF8Q02556 426 aa17.46■□□□□ 0.39
CDKN3-209ENST00000556102 SERTAD2Q14140 314 aa17.46■□□□□ 0.39
CDKN3-209ENST00000556102 TBCCQ15814 346 aa17.46■□□□□ 0.39
CDKN3-209ENST00000556102 HIST2H2ACQ16777 129 aaPredicted RBP17.46■□□□□ 0.39
CDKN3-209ENST00000556102 EMC4Q5J8M3 183 aa17.46■□□□□ 0.39
CDKN3-209ENST00000556102 HIST2H2AA3Q6FI13 130 aa17.46■□□□□ 0.39
CDKN3-209ENST00000556102 ZNF793Q6ZN11 406 aa17.46■□□□□ 0.39
CDKN3-209ENST00000556102 OR8K3Q8NH51 312 aa17.46■□□□□ 0.39
CDKN3-209ENST00000556102 RND1Q92730 232 aa17.46■□□□□ 0.39
CDKN3-209ENST00000556102 TBCDQ9BTW9 1192 aa17.46■□□□□ 0.39
CDKN3-209ENST00000556102 MS4A8Q9BY19 250 aa17.46■□□□□ 0.39
CDKN3-209ENST00000556102 OR8D2Q9GZM6 311 aa17.46■□□□□ 0.39
CDKN3-209ENST00000556102 ZDHHC11Q9H8X9 412 aa17.46■□□□□ 0.39
CDKN3-209ENST00000556102 RNF14Q9UBS8 474 aa17.46■□□□□ 0.39
CDKN3-209ENST00000556102 RNF6Q9Y252 685 aa17.46■□□□□ 0.39
CDKN3-209ENST00000556102 C2CD3Q4AC94 2353 aa17.46■□□□□ 0.39
CDKN3-209ENST00000556102 HIVEP1P15822 2718 aa17.46■□□□□ 0.39
CDKN3-209ENST00000556102 A0A0G2JMM0 328 aa17.45■□□□□ 0.38
CDKN3-209ENST00000556102 A0A1W2PPB8 328 aa17.45■□□□□ 0.38
CDKN3-209ENST00000556102 A0A1W2PRS3 328 aa17.45■□□□□ 0.38
CDKN3-209ENST00000556102 FAM166BA8MTA8 275 aa17.45■□□□□ 0.38
CDKN3-209ENST00000556102 KIR3DP1A8MWS1 328 aa17.45■□□□□ 0.38
CDKN3-209ENST00000556102 FANCGO15287 622 aa17.45■□□□□ 0.38
CDKN3-209ENST00000556102 EIF3HO15372 352 aaKnown RBP eCLIP17.45■□□□□ 0.38
CDKN3-209ENST00000556102 CCNT2O60583 730 aaKnown RBP17.45■□□□□ 0.38
CDKN3-209ENST00000556102 S100BP04271 92 aaPredicted RBP17.45■□□□□ 0.38
CDKN3-209ENST00000556102 TNNI3P19429 210 aa17.45■□□□□ 0.38
CDKN3-209ENST00000556102 CASP2P42575 452 aa17.45■□□□□ 0.38
CDKN3-209ENST00000556102 MSH2P43246 934 aa17.45■□□□□ 0.38
CDKN3-209ENST00000556102 NR0B1P51843 470 aaKnown RBP17.45■□□□□ 0.38
CDKN3-209ENST00000556102 CHIT1Q13231 466 aa17.45■□□□□ 0.38
CDKN3-209ENST00000556102 E2F2Q14209 437 aa17.45■□□□□ 0.38
CDKN3-209ENST00000556102 ZKSCAN8Q15776 578 aaPredicted RBP17.45■□□□□ 0.38
CDKN3-209ENST00000556102 RTL4Q6ZR62 310 aa17.45■□□□□ 0.38
CDKN3-209ENST00000556102 GK5Q6ZS86 529 aa17.45■□□□□ 0.38
CDKN3-209ENST00000556102 LRRC70Q7Z2Q7 622 aa17.45■□□□□ 0.38
CDKN3-209ENST00000556102 UBE3DQ7Z6J8 389 aa17.45■□□□□ 0.38
CDKN3-209ENST00000556102 SLC22A16Q86VW1 577 aa17.45■□□□□ 0.38
CDKN3-209ENST00000556102 ZNF321PQ8N8H1 164 aa17.45■□□□□ 0.38
CDKN3-209ENST00000556102 LILRB4Q8NHJ6 448 aa17.45■□□□□ 0.38
CDKN3-209ENST00000556102 SLC2A12Q8TD20 617 aa17.45■□□□□ 0.38
CDKN3-209ENST00000556102 SREK1Q8WXA9 508 aaKnown RBP17.45■□□□□ 0.38
CDKN3-209ENST00000556102 UBXN10Q96LJ8 280 aa17.45■□□□□ 0.38
CDKN3-209ENST00000556102 MAPKAP1Q9BPZ7 522 aa17.45■□□□□ 0.38
CDKN3-209ENST00000556102 TTTY12Q9BZ98 90 aa17.45■□□□□ 0.38
CDKN3-209ENST00000556102 SAYSD1Q9NPB0 183 aa17.45■□□□□ 0.38
CDKN3-209ENST00000556102 RNF112Q9ULX5 631 aa17.45■□□□□ 0.38
CDKN3-209ENST00000556102 SPACA6W5XKT8 324 aa17.45■□□□□ 0.38
CDKN3-209ENST00000556102 MED13LQ71F56 2210 aa17.44■□□□□ 0.38
CDKN3-209ENST00000556102 TCRBV9S1A1TA0A576 114 aa17.44■□□□□ 0.38
CDKN3-209ENST00000556102 FAM159BA6NKW6 160 aa17.44■□□□□ 0.38
CDKN3-209ENST00000556102 C17orf105B2RV13 164 aa17.44■□□□□ 0.38
CDKN3-209ENST00000556102 LDB3O75112 727 aa17.44■□□□□ 0.38
CDKN3-209ENST00000556102 SCELO95171 688 aa17.44■□□□□ 0.38
CDKN3-209ENST00000556102 IGFBP2P18065 325 aa17.44■□□□□ 0.38
CDKN3-209ENST00000556102 ATP5A1P25705 553 aaKnown RBP17.44■□□□□ 0.38
CDKN3-209ENST00000556102 RAB10P61026 200 aa17.44■□□□□ 0.38
CDKN3-209ENST00000556102 RNF4P78317 190 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms