RNA–Protein interactions for RNA: ENST00000555231.5

XRCC3-212, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 3

Gene XRCC3, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-212ENST00000555231 ALOXE3Q9BYJ1 711 aa12.13□□□□□ -0.47
XRCC3-212ENST00000555231 DLL4Q9NR61 685 aa12.13□□□□□ -0.47
XRCC3-212ENST00000555231 SACM1LQ9NTJ5 587 aa12.13□□□□□ -0.47
XRCC3-212ENST00000555231 TRMT1Q9NXH9 659 aaKnown RBP12.13□□□□□ -0.47
XRCC3-212ENST00000555231 SPRR3Q9UBC9 169 aa12.13□□□□□ -0.47
XRCC3-212ENST00000555231 MRPS33Q9Y291 106 aaKnown RBP12.13□□□□□ -0.47
XRCC3-212ENST00000555231 RPH3AQ9Y2J0 694 aaPredicted RBP12.13□□□□□ -0.47
XRCC3-212ENST00000555231 VWA7Q9Y334 891 aa12.13□□□□□ -0.47
XRCC3-212ENST00000555231 MPDZO75970 2070 aa12.13□□□□□ -0.47
XRCC3-212ENST00000555231 NINQ8N4C6 2090 aa12.13□□□□□ -0.47
XRCC3-212ENST00000555231 TRGV5A0A0B4J1U4 118 aa12.12□□□□□ -0.47
XRCC3-212ENST00000555231 LRIT2A6NDA9 550 aa12.12□□□□□ -0.47
XRCC3-212ENST00000555231 NPEPPSL1A6NEC2 478 aa12.12□□□□□ -0.47
XRCC3-212ENST00000555231 H2AFYO75367 372 aaKnown RBP12.12□□□□□ -0.47
XRCC3-212ENST00000555231 WDR47O94967 919 aa12.12□□□□□ -0.47
XRCC3-212ENST00000555231 P04436 131 aa12.12□□□□□ -0.47
XRCC3-212ENST00000555231 C1GALT1C1LP0DN25 315 aa12.12□□□□□ -0.47
XRCC3-212ENST00000555231 ENDOUP21128 410 aaKnown RBP12.12□□□□□ -0.47
XRCC3-212ENST00000555231 PIGAP37287 484 aa12.12□□□□□ -0.47
XRCC3-212ENST00000555231 GDF5P43026 501 aa12.12□□□□□ -0.47
XRCC3-212ENST00000555231 LIM2P55344 173 aa12.12□□□□□ -0.47
XRCC3-212ENST00000555231 RNF4P78317 190 aa12.12□□□□□ -0.47
XRCC3-212ENST00000555231 ADAM8P78325 824 aa12.12□□□□□ -0.47
XRCC3-212ENST00000555231 ID2Q02363 134 aa12.12□□□□□ -0.47
XRCC3-212ENST00000555231 PPP1R3AQ16821 1122 aa12.12□□□□□ -0.47
XRCC3-212ENST00000555231 MSS51Q4VC12 460 aa12.12□□□□□ -0.47
XRCC3-212ENST00000555231 SPANXN3Q5MJ09 141 aa12.12□□□□□ -0.47
XRCC3-212ENST00000555231 TEDDM1Q5T9Z0 273 aa12.12□□□□□ -0.47
XRCC3-212ENST00000555231 ADNP2Q6IQ32 1131 aa12.12□□□□□ -0.47
XRCC3-212ENST00000555231 FAM45BPQ6NSW5 357 aa12.12□□□□□ -0.47
XRCC3-212ENST00000555231 TMIGD1Q6UXZ0 262 aa12.12□□□□□ -0.47
XRCC3-212ENST00000555231 IGDCC3Q8IVU1 814 aa12.12□□□□□ -0.47
XRCC3-212ENST00000555231 CNTN4Q8IWV2 1026 aa12.12□□□□□ -0.47
XRCC3-212ENST00000555231 PPIL6Q8IXY8 311 aa12.12□□□□□ -0.47
XRCC3-212ENST00000555231 RELL2Q8NC24 303 aaPredicted RBP12.12□□□□□ -0.47
XRCC3-212ENST00000555231 MORN4Q8NDC4 146 aa12.12□□□□□ -0.47
XRCC3-212ENST00000555231 GABPB2Q8TAK5 448 aaPredicted RBP12.12□□□□□ -0.47
XRCC3-212ENST00000555231 FAM45AQ8TCE6 357 aa12.12□□□□□ -0.47
XRCC3-212ENST00000555231 DAZLQ92904 295 aaKnown RBP12.12□□□□□ -0.47
XRCC3-212ENST00000555231 CERS2Q96G23 380 aa12.12□□□□□ -0.47
XRCC3-212ENST00000555231 SMR3AQ99954 134 aa12.12□□□□□ -0.47
XRCC3-212ENST00000555231 PPANQ9NQ55 473 aaKnown RBP12.12□□□□□ -0.47
XRCC3-212ENST00000555231 DMRT3Q9NQL9 472 aa12.12□□□□□ -0.47
XRCC3-212ENST00000555231 DAPP1Q9UN19 280 aa12.12□□□□□ -0.47
XRCC3-212ENST00000555231 ATG4BQ9Y4P1 393 aa12.12□□□□□ -0.47
XRCC3-212ENST00000555231 FLNAP21333 2647 aaKnown RBP12.12□□□□□ -0.47
XRCC3-212ENST00000555231 HRNRQ86YZ3 2850 aaPredicted RBP12.12□□□□□ -0.47
XRCC3-212ENST00000555231 A0A1B0GTL3 188 aa12.11□□□□□ -0.47
XRCC3-212ENST00000555231 A6NNC1 897 aa12.11□□□□□ -0.47
XRCC3-212ENST00000555231 C17orf105B2RV13 164 aa12.11□□□□□ -0.47
XRCC3-212ENST00000555231 CYR61O00622 381 aa12.11□□□□□ -0.47
XRCC3-212ENST00000555231 SUSD5O60279 629 aa12.11□□□□□ -0.47
XRCC3-212ENST00000555231 CTNSO60931 367 aa12.11□□□□□ -0.47
XRCC3-212ENST00000555231 LDB3O75112 727 aa12.11□□□□□ -0.47
XRCC3-212ENST00000555231 FAM155BO75949 473 aa12.11□□□□□ -0.47
XRCC3-212ENST00000555231 TBX6O95947 436 aaPredicted RBP12.11□□□□□ -0.47
XRCC3-212ENST00000555231 STX4Q12846 297 aa12.11□□□□□ -0.47
XRCC3-212ENST00000555231 ZNF460Q14592 562 aa12.11□□□□□ -0.47
XRCC3-212ENST00000555231 HYAL4Q2M3T9 481 aa12.11□□□□□ -0.47
XRCC3-212ENST00000555231 HP1BP3Q5SSJ5 553 aaPredicted RBP12.11□□□□□ -0.47
XRCC3-212ENST00000555231 RIPPLY2Q5TAB7 128 aa12.11□□□□□ -0.47
XRCC3-212ENST00000555231 RNASEH2BQ5TBB1 312 aaKnown RBP12.11□□□□□ -0.47
XRCC3-212ENST00000555231 OPN5Q6U736 354 aa12.11□□□□□ -0.47
XRCC3-212ENST00000555231 SLCO4C1Q6ZQN7 724 aa12.11□□□□□ -0.47
XRCC3-212ENST00000555231 SEM1Q6ZVN7 128 aa12.11□□□□□ -0.47
XRCC3-212ENST00000555231 VN1R5Q7Z5H4 357 aa12.11□□□□□ -0.47
XRCC3-212ENST00000555231 GOLM1Q8NBJ4 401 aa12.11□□□□□ -0.47
XRCC3-212ENST00000555231 OR14A16Q8NHC5 309 aa12.11□□□□□ -0.47
XRCC3-212ENST00000555231 SLC2A12Q8TD20 617 aa12.11□□□□□ -0.47
XRCC3-212ENST00000555231 PDLIM5Q96HC4 596 aaKnown RBP12.11□□□□□ -0.47
XRCC3-212ENST00000555231 CAPZA3Q96KX2 299 aa12.11□□□□□ -0.47
XRCC3-212ENST00000555231 RUNDC3BQ96NL0 473 aa12.11□□□□□ -0.47
XRCC3-212ENST00000555231 SERINC2Q96SA4 455 aa12.11□□□□□ -0.47
XRCC3-212ENST00000555231 SLC6A15Q9H2J7 730 aa12.11□□□□□ -0.47
XRCC3-212ENST00000555231 COPS7BQ9H9Q2 264 aaPredicted RBP12.11□□□□□ -0.47
XRCC3-212ENST00000555231 PLAC1Q9HBJ0 212 aa12.11□□□□□ -0.47
XRCC3-212ENST00000555231 VTI1BQ9UEU0 232 aa12.11□□□□□ -0.47
XRCC3-212ENST00000555231 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.11□□□□□ -0.47
XRCC3-212ENST00000555231 ABCA2Q9BZC7 2435 aa12.11□□□□□ -0.47
XRCC3-212ENST00000555231 KIAA1549Q9HCM3 1950 aa12.1□□□□□ -0.47
XRCC3-212ENST00000555231 A0A088AWK7 358 aa12.1□□□□□ -0.47
XRCC3-212ENST00000555231 ANKDD1BA6NHY2 528 aa12.1□□□□□ -0.47
XRCC3-212ENST00000555231 KDM4EB2RXH2 506 aaPredicted RBP12.1□□□□□ -0.47
XRCC3-212ENST00000555231 ETHE1O95571 254 aa12.1□□□□□ -0.47
XRCC3-212ENST00000555231 TTC4O95801 387 aa12.1□□□□□ -0.47
XRCC3-212ENST00000555231 RFPL3SP0C7P2 107 aa12.1□□□□□ -0.47
XRCC3-212ENST00000555231 GABRA1P14867 456 aa12.1□□□□□ -0.47
XRCC3-212ENST00000555231 ZNF37AP17032 561 aaPredicted RBP12.1□□□□□ -0.47
XRCC3-212ENST00000555231 GNAZP19086 355 aa12.1□□□□□ -0.47
XRCC3-212ENST00000555231 ZNF10P21506 573 aaPredicted RBP12.1□□□□□ -0.47
XRCC3-212ENST00000555231 CDC25BP30305 580 aa12.1□□□□□ -0.47
XRCC3-212ENST00000555231 MTTPP55157 894 aa12.1□□□□□ -0.47
XRCC3-212ENST00000555231 WNT3P56703 355 aa12.1□□□□□ -0.47
XRCC3-212ENST00000555231 LTBQ06643 244 aa12.1□□□□□ -0.47
XRCC3-212ENST00000555231 ASPHQ12797 758 aa12.1□□□□□ -0.47
XRCC3-212ENST00000555231 BBS9Q3SYG4 887 aa12.1□□□□□ -0.47
XRCC3-212ENST00000555231 FLYWCH1Q4VC44 716 aa12.1□□□□□ -0.47
XRCC3-212ENST00000555231 PRAMEF20Q5VT98 475 aa12.1□□□□□ -0.47
XRCC3-212ENST00000555231 TRIM40Q6P9F5 258 aa12.1□□□□□ -0.47
XRCC3-212ENST00000555231 ABHD17CQ6PCB6 329 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms