RNA–Protein interactions for RNA: ENST00000554079.1

SIX4-202, Transcript of SIX homeobox 4, humanhuman

TSL 1 (best)

Gene SIX4, Length 2,003 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-202ENST00000554079 B3GNTL1Q67FW5 361 aaPredicted RBP9.15□□□□□ -0.94
SIX4-202ENST00000554079 PLAG1Q6DJT9 500 aa9.15□□□□□ -0.94
SIX4-202ENST00000554079 ELP2Q6IA86 826 aa9.15□□□□□ -0.94
SIX4-202ENST00000554079 SCIMPQ6UWF3 145 aa9.15□□□□□ -0.94
SIX4-202ENST00000554079 ALKAL2Q6UX46 152 aa9.15□□□□□ -0.94
SIX4-202ENST00000554079 ZPBP2Q6X784 338 aa9.15□□□□□ -0.94
SIX4-202ENST00000554079 LNX2Q8N448 690 aa9.15□□□□□ -0.94
SIX4-202ENST00000554079 OR2T35Q8NGX2 323 aa9.15□□□□□ -0.94
SIX4-202ENST00000554079 IL31RAQ8NI17 732 aa9.15□□□□□ -0.94
SIX4-202ENST00000554079 KCNJ9Q92806 393 aa9.15□□□□□ -0.94
SIX4-202ENST00000554079 EXT2Q93063 718 aa9.15□□□□□ -0.94
SIX4-202ENST00000554079 CCDC17Q96LX7 622 aa9.15□□□□□ -0.94
SIX4-202ENST00000554079 ZNF599Q96NL3 588 aa9.15□□□□□ -0.94
SIX4-202ENST00000554079 PARK7Q99497 189 aaKnown RBP9.15□□□□□ -0.94
SIX4-202ENST00000554079 C14orf105Q9NVL8 296 aa9.15□□□□□ -0.94
SIX4-202ENST00000554079 RCOR3Q9P2K3 495 aaPredicted RBP9.15□□□□□ -0.94
SIX4-202ENST00000554079 SLC2A6Q9UGQ3 507 aa9.15□□□□□ -0.94
SIX4-202ENST00000554079 PCDHA10Q9Y5I2 948 aa9.15□□□□□ -0.94
SIX4-202ENST00000554079 BACE2Q9Y5Z0 518 aa9.15□□□□□ -0.94
SIX4-202ENST00000554079 LOC105369274A0A096LPK9 316 aa9.14□□□□□ -0.95
SIX4-202ENST00000554079 PLSCR5A0PG75 271 aa9.14□□□□□ -0.95
SIX4-202ENST00000554079 M0R129 80 aa9.14□□□□□ -0.95
SIX4-202ENST00000554079 CDC7O00311 574 aa9.14□□□□□ -0.95
SIX4-202ENST00000554079 KPNA3O00505 521 aaPredicted RBP9.14□□□□□ -0.95
SIX4-202ENST00000554079 UBE2CO00762 179 aa9.14□□□□□ -0.95
SIX4-202ENST00000554079 HPP00738 406 aa9.14□□□□□ -0.95
SIX4-202ENST00000554079 NFKB1P19838 968 aa9.14□□□□□ -0.95
SIX4-202ENST00000554079 CD96P40200 585 aa9.14□□□□□ -0.95
SIX4-202ENST00000554079 ARL4AP40617 200 aa9.14□□□□□ -0.95
SIX4-202ENST00000554079 BDKRB1P46663 353 aa9.14□□□□□ -0.95
SIX4-202ENST00000554079 INPP1P49441 399 aa9.14□□□□□ -0.95
SIX4-202ENST00000554079 SELENOPP49908 381 aa9.14□□□□□ -0.95
SIX4-202ENST00000554079 XKP51811 444 aa9.14□□□□□ -0.95
SIX4-202ENST00000554079 ACLYP53396 1101 aa9.14□□□□□ -0.95
SIX4-202ENST00000554079 CTSCP53634 463 aa9.14□□□□□ -0.95
SIX4-202ENST00000554079 SLC6A3Q01959 620 aa9.14□□□□□ -0.95
SIX4-202ENST00000554079 ACY1Q03154 408 aa9.14□□□□□ -0.95
SIX4-202ENST00000554079 ECH1Q13011 328 aa9.14□□□□□ -0.95
SIX4-202ENST00000554079 LCP2Q13094 533 aa9.14□□□□□ -0.95
SIX4-202ENST00000554079 ST3GAL2Q16842 350 aa9.14□□□□□ -0.95
SIX4-202ENST00000554079 TKFCQ3LXA3 575 aa9.14□□□□□ -0.95
SIX4-202ENST00000554079 MFSD14BQ5SR56 506 aa9.14□□□□□ -0.95
SIX4-202ENST00000554079 SFRP5Q5T4F7 317 aa9.14□□□□□ -0.95
SIX4-202ENST00000554079 HECTD2Q5U5R9 776 aa9.14□□□□□ -0.95
SIX4-202ENST00000554079 TMEM88Q6PEY1 159 aa9.14□□□□□ -0.95
SIX4-202ENST00000554079 HAGHLQ6PII5 290 aaPredicted RBP9.14□□□□□ -0.95
SIX4-202ENST00000554079 LDLRAD3Q86YD5 345 aa9.14□□□□□ -0.95
SIX4-202ENST00000554079 PHACTR4Q8IZ21 702 aa9.14□□□□□ -0.95
SIX4-202ENST00000554079 OR4N4Q8N0Y3 316 aa9.14□□□□□ -0.95
SIX4-202ENST00000554079 SLC43A2Q8N370 569 aa9.14□□□□□ -0.95
SIX4-202ENST00000554079 CHURC1Q8WUH1 139 aa9.14□□□□□ -0.95
SIX4-202ENST00000554079 ADAMTS14Q8WXS8 1223 aa9.14□□□□□ -0.95
SIX4-202ENST00000554079 HSD17B8Q92506 261 aa9.14□□□□□ -0.95
SIX4-202ENST00000554079 AP3S1Q92572 193 aa9.14□□□□□ -0.95
SIX4-202ENST00000554079 PEX11GQ96HA9 241 aa9.14□□□□□ -0.95
SIX4-202ENST00000554079 C12orf42Q96LP6 360 aa9.14□□□□□ -0.95
SIX4-202ENST00000554079 DDOQ99489 341 aa9.14□□□□□ -0.95
SIX4-202ENST00000554079 TCF25Q9BQ70 676 aa9.14□□□□□ -0.95
SIX4-202ENST00000554079 WDR77Q9BQA1 342 aaPredicted RBP9.14□□□□□ -0.95
SIX4-202ENST00000554079 CPPED1Q9BRF8 314 aaPredicted RBP9.14□□□□□ -0.95
SIX4-202ENST00000554079 KATNB1Q9BVA0 655 aa9.14□□□□□ -0.95
SIX4-202ENST00000554079 PRKD2Q9BZL6 878 aa9.14□□□□□ -0.95
SIX4-202ENST00000554079 NUDT15Q9NV35 164 aa9.14□□□□□ -0.95
SIX4-202ENST00000554079 RNF19AQ9NV58 838 aa9.14□□□□□ -0.95
SIX4-202ENST00000554079 PDCD11Q14690 1871 aaKnown RBP9.14□□□□□ -0.95
SIX4-202ENST00000554079 TEX13CA0A0J9YWL9 993 aa9.14□□□□□ -0.95
SIX4-202ENST00000554079 SMIM30A4D0T7 59 aa9.14□□□□□ -0.95
SIX4-202ENST00000554079 ADAMDEC1O15204 470 aa9.14□□□□□ -0.95
SIX4-202ENST00000554079 SLC31A2O15432 143 aa9.14□□□□□ -0.95
SIX4-202ENST00000554079 LANCL1O43813 399 aa9.14□□□□□ -0.95
SIX4-202ENST00000554079 OR1I1O60431 355 aa9.14□□□□□ -0.95
SIX4-202ENST00000554079 SDC3O75056 442 aa9.14□□□□□ -0.95
SIX4-202ENST00000554079 CILPO75339 1184 aa9.14□□□□□ -0.95
SIX4-202ENST00000554079 SOX30O94993 753 aa9.14□□□□□ -0.95
SIX4-202ENST00000554079 SIX6O95475 246 aa9.14□□□□□ -0.95
SIX4-202ENST00000554079 S1PR4O95977 384 aa9.14□□□□□ -0.95
SIX4-202ENST00000554079 ESR1P03372 595 aa9.14□□□□□ -0.95
SIX4-202ENST00000554079 FABP3P05413 133 aa9.14□□□□□ -0.95
SIX4-202ENST00000554079 CRYBA1P05813 215 aa9.14□□□□□ -0.95
SIX4-202ENST00000554079 PIPP12273 146 aaPredicted RBP9.14□□□□□ -0.95
SIX4-202ENST00000554079 PAICSP22234 425 aaKnown RBP9.14□□□□□ -0.95
SIX4-202ENST00000554079 MMP12P39900 470 aa9.14□□□□□ -0.95
SIX4-202ENST00000554079 STK19P49842 368 aaPredicted RBP9.14□□□□□ -0.95
SIX4-202ENST00000554079 NR0B1P51843 470 aaKnown RBP9.14□□□□□ -0.95
SIX4-202ENST00000554079 RNF4P78317 190 aa9.14□□□□□ -0.95
SIX4-202ENST00000554079 ITPK1Q13572 414 aa9.14□□□□□ -0.95
SIX4-202ENST00000554079 GRIN2CQ14957 1233 aa9.14□□□□□ -0.95
SIX4-202ENST00000554079 ZNF792Q3KQV3 632 aa9.14□□□□□ -0.95
SIX4-202ENST00000554079 SLC39A12Q504Y0 691 aa9.14□□□□□ -0.95
SIX4-202ENST00000554079 EEF1AKMT2Q5JPI9 291 aaKnown RBP9.14□□□□□ -0.95
SIX4-202ENST00000554079 C9orf152Q5JTZ5 239 aa9.14□□□□□ -0.95
SIX4-202ENST00000554079 AVPI1Q5T686 147 aa9.14□□□□□ -0.95
SIX4-202ENST00000554079 C9orf131Q5VYM1 1079 aa9.14□□□□□ -0.95
SIX4-202ENST00000554079 DHRS7BQ6IAN0 325 aaPredicted RBP9.14□□□□□ -0.95
SIX4-202ENST00000554079 FGD2Q7Z6J4 655 aa9.14□□□□□ -0.95
SIX4-202ENST00000554079 SERINC5Q86VE9 423 aa9.14□□□□□ -0.95
SIX4-202ENST00000554079 KLHDC8BQ8IXV7 354 aa9.14□□□□□ -0.95
SIX4-202ENST00000554079 MCPH1Q8NEM0 835 aa9.14□□□□□ -0.95
SIX4-202ENST00000554079 MDGA1Q8NFP4 955 aa9.14□□□□□ -0.95
SIX4-202ENST00000554079 SH3RF2Q8TEC5 729 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms