RNA–Protein interactions for RNA: ENST00000554062.5

PABPN1-204, Transcript of poly(A) binding protein nuclear 1, human

TSL 3

Gene PABPN1, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PABPN1-204	ENST00000554062	NGB	Q9NPG2	151 aa		4.16	□□□□□ -1.74
PABPN1-204	ENST00000554062	VPS54	Q9P1Q0	977 aa		4.16	□□□□□ -1.74
PABPN1-204	ENST00000554062	ZNF319	Q9P2F9	582 aa		4.16	□□□□□ -1.74
PABPN1-204	ENST00000554062	RNF7	Q9UBF6	113 aa		4.16	□□□□□ -1.74
PABPN1-204	ENST00000554062	EPHA6	Q9UF33	1036 aa		4.16	□□□□□ -1.74
PABPN1-204	ENST00000554062	FAM153A	Q9UHL3	310 aa		4.16	□□□□□ -1.74
PABPN1-204	ENST00000554062	TMEM131L	A2VDJ0	1609 aa		4.16	□□□□□ -1.74
PABPN1-204	ENST00000554062	ATP8B3	O60423	1300 aa		4.16	□□□□□ -1.74
PABPN1-204	ENST00000554062	FAM205A	Q6ZU69	1335 aa		4.16	□□□□□ -1.74
PABPN1-204	ENST00000554062	XIRP1	Q702N8	1843 aa	Known RBP	4.16	□□□□□ -1.74
PABPN1-204	ENST00000554062		E9PCH4	1651 aa		4.16	□□□□□ -1.74
PABPN1-204	ENST00000554062	CKAP5	Q14008	2032 aa		4.16	□□□□□ -1.74
PABPN1-204	ENST00000554062	NAIP	Q13075	1403 aa		4.15	□□□□□ -1.74
PABPN1-204	ENST00000554062		A0A087WUV0	522 aa	Predicted RBP	4.15	□□□□□ -1.75
PABPN1-204	ENST00000554062		H3BMM5	538 aa		4.15	□□□□□ -1.75
PABPN1-204	ENST00000554062	ANGPT2	O15123	496 aa		4.15	□□□□□ -1.75
PABPN1-204	ENST00000554062	SOCS5	O75159	536 aa		4.15	□□□□□ -1.75
PABPN1-204	ENST00000554062	IDH1	O75874	414 aa	Known RBP	4.15	□□□□□ -1.75
PABPN1-204	ENST00000554062	STBD1	O95210	358 aa		4.15	□□□□□ -1.75
PABPN1-204	ENST00000554062	PAK4	O96013	591 aa	Predicted RBP	4.15	□□□□□ -1.75
PABPN1-204	ENST00000554062	PDGFB	P01127	241 aa	Predicted RBP	4.15	□□□□□ -1.75
PABPN1-204	ENST00000554062	MT-ND2	P03891	347 aa		4.15	□□□□□ -1.75
PABPN1-204	ENST00000554062	KRT6B	P04259	564 aa		4.15	□□□□□ -1.75
PABPN1-204	ENST00000554062	PRSS1	P07477	247 aa		4.15	□□□□□ -1.75
PABPN1-204	ENST00000554062	HIST1H2AG	P0C0S8	130 aa	Predicted RBP	4.15	□□□□□ -1.75
PABPN1-204	ENST00000554062	SKIL	P12757	684 aa		4.15	□□□□□ -1.75
PABPN1-204	ENST00000554062	ACKR3	P25106	362 aa		4.15	□□□□□ -1.75
PABPN1-204	ENST00000554062	DUT	P33316	252 aa	Known RBP	4.15	□□□□□ -1.75
PABPN1-204	ENST00000554062	TNFRSF4	P43489	277 aa		4.15	□□□□□ -1.75
PABPN1-204	ENST00000554062	KRT6C	P48668	564 aa		4.15	□□□□□ -1.75
PABPN1-204	ENST00000554062	LINC00205	P59089	165 aa		4.15	□□□□□ -1.75
PABPN1-204	ENST00000554062	CNTN1	Q12860	1018 aa		4.15	□□□□□ -1.75
PABPN1-204	ENST00000554062	CDH18	Q13634	790 aa		4.15	□□□□□ -1.75
PABPN1-204	ENST00000554062	SPHAR	Q15513	63 aa		4.15	□□□□□ -1.75
PABPN1-204	ENST00000554062	ZNF74	Q16587	644 aa		4.15	□□□□□ -1.75
PABPN1-204	ENST00000554062	MPPE1	Q53F39	396 aa		4.15	□□□□□ -1.75
PABPN1-204	ENST00000554062	WDR38	Q5JTN6	314 aa		4.15	□□□□□ -1.75
PABPN1-204	ENST00000554062	SLC35E4	Q6ICL7	350 aa		4.15	□□□□□ -1.75
PABPN1-204	ENST00000554062	CWC27	Q6UX04	472 aa	Known RBP	4.15	□□□□□ -1.75
PABPN1-204	ENST00000554062	WDR88	Q6ZMY6	472 aa		4.15	□□□□□ -1.75
PABPN1-204	ENST00000554062	C9orf139	Q6ZV77	190 aa		4.15	□□□□□ -1.75
PABPN1-204	ENST00000554062	C1orf186	Q6ZWK4	172 aa		4.15	□□□□□ -1.75
PABPN1-204	ENST00000554062	PIGZ	Q86VD9	579 aa		4.15	□□□□□ -1.75
PABPN1-204	ENST00000554062	VPS36	Q86VN1	386 aa		4.15	□□□□□ -1.75
PABPN1-204	ENST00000554062	HIST2H2AB	Q8IUE6	130 aa	Predicted RBP	4.15	□□□□□ -1.75
PABPN1-204	ENST00000554062	TEX26	Q8N6G2	289 aa		4.15	□□□□□ -1.75
PABPN1-204	ENST00000554062	STPG4	Q8N801	248 aa		4.15	□□□□□ -1.75
PABPN1-204	ENST00000554062	LMNTD1	Q8N9Z9	388 aa		4.15	□□□□□ -1.75
PABPN1-204	ENST00000554062	CNBD1	Q8NA66	436 aa		4.15	□□□□□ -1.75
PABPN1-204	ENST00000554062	DENND6B	Q8NEG7	585 aa		4.15	□□□□□ -1.75
PABPN1-204	ENST00000554062	TRPV3	Q8NET8	790 aa		4.15	□□□□□ -1.75
PABPN1-204	ENST00000554062	GOLGA5	Q8TBA6	731 aa		4.15	□□□□□ -1.75
PABPN1-204	ENST00000554062	CASP10	Q92851	521 aa		4.15	□□□□□ -1.75
PABPN1-204	ENST00000554062	HIST1H2AC	Q93077	130 aa		4.15	□□□□□ -1.75
PABPN1-204	ENST00000554062	BPIFA2	Q96DR5	249 aa		4.15	□□□□□ -1.75
PABPN1-204	ENST00000554062	RPGRIP1	Q96KN7	1286 aa		4.15	□□□□□ -1.75
PABPN1-204	ENST00000554062	GPA33	Q99795	319 aa		4.15	□□□□□ -1.75
PABPN1-204	ENST00000554062	SHARPIN	Q9H0F6	387 aa		4.15	□□□□□ -1.75
PABPN1-204	ENST00000554062	LIN28A	Q9H9Z2	209 aa	Known RBP	4.15	□□□□□ -1.75
PABPN1-204	ENST00000554062	S100A14	Q9HCY8	104 aa		4.15	□□□□□ -1.75
PABPN1-204	ENST00000554062	HACD3	Q9P035	362 aa		4.15	□□□□□ -1.75
PABPN1-204	ENST00000554062	ETV7	Q9Y603	341 aa		4.15	□□□□□ -1.75
PABPN1-204	ENST00000554062	IQGAP1	P46940	1657 aa		4.15	□□□□□ -1.75
PABPN1-204	ENST00000554062	CPS1	P31327	1500 aa		4.15	□□□□□ -1.75
PABPN1-204	ENST00000554062	TMEM2	Q9UHN6	1383 aa		4.14	□□□□□ -1.75
PABPN1-204	ENST00000554062	NWD1	Q149M9	1564 aa		4.14	□□□□□ -1.75
PABPN1-204	ENST00000554062	SCAF11	Q99590	1463 aa	Known RBP	4.14	□□□□□ -1.75
PABPN1-204	ENST00000554062	SERINC4	A6NH21	518 aa		4.14	□□□□□ -1.75
PABPN1-204	ENST00000554062	KPNA7	A9QM74	516 aa		4.14	□□□□□ -1.75
PABPN1-204	ENST00000554062	CCL24	O00175	119 aa		4.14	□□□□□ -1.75
PABPN1-204	ENST00000554062	BUB3	O43684	328 aa		4.14	□□□□□ -1.75
PABPN1-204	ENST00000554062	PEX11A	O75192	247 aa		4.14	□□□□□ -1.75
PABPN1-204	ENST00000554062	AKR7A3	O95154	331 aa		4.14	□□□□□ -1.75
PABPN1-204	ENST00000554062	EML2	O95834	649 aa		4.14	□□□□□ -1.75
PABPN1-204	ENST00000554062	EPO	P01588	193 aa		4.14	□□□□□ -1.75
PABPN1-204	ENST00000554062	CRYAA	P02489	173 aa		4.14	□□□□□ -1.75
PABPN1-204	ENST00000554062	CHRNG	P07510	517 aa		4.14	□□□□□ -1.75
PABPN1-204	ENST00000554062	F7	P08709	466 aa	Predicted RBP	4.14	□□□□□ -1.75
PABPN1-204	ENST00000554062	ODC1	P11926	461 aa		4.14	□□□□□ -1.75
PABPN1-204	ENST00000554062	RPL35A	P18077	110 aa	Known RBP	4.14	□□□□□ -1.75
PABPN1-204	ENST00000554062	SP3	Q02447	781 aa		4.14	□□□□□ -1.75
PABPN1-204	ENST00000554062	GCNT1	Q02742	428 aa		4.14	□□□□□ -1.75
PABPN1-204	ENST00000554062	PDZK1IP1	Q13113	114 aa		4.14	□□□□□ -1.75
PABPN1-204	ENST00000554062	IDI1	Q13907	227 aa		4.14	□□□□□ -1.75
PABPN1-204	ENST00000554062	SQLE	Q14534	574 aa		4.14	□□□□□ -1.75
PABPN1-204	ENST00000554062	TMEM132D	Q14C87	1099 aa		4.14	□□□□□ -1.75
PABPN1-204	ENST00000554062	HEPACAM	Q14CZ8	416 aa		4.14	□□□□□ -1.75
PABPN1-204	ENST00000554062	P2RY6	Q15077	328 aa		4.14	□□□□□ -1.75
PABPN1-204	ENST00000554062	TAF1B	Q53T94	588 aa	Predicted RBP	4.14	□□□□□ -1.75
PABPN1-204	ENST00000554062	C9orf50	Q5SZB4	431 aa		4.14	□□□□□ -1.75
PABPN1-204	ENST00000554062	ATP1A1-AS1	Q5TC04	95 aa		4.14	□□□□□ -1.75
PABPN1-204	ENST00000554062	LYPLAL1	Q5VWZ2	237 aa		4.14	□□□□□ -1.75
PABPN1-204	ENST00000554062	RBMS3	Q6XE24	437 aa	Known RBP	4.14	□□□□□ -1.75
PABPN1-204	ENST00000554062	LEKR1	Q6ZMV7	388 aa		4.14	□□□□□ -1.75
PABPN1-204	ENST00000554062	RBM23	Q86U06	439 aa	Known RBP	4.14	□□□□□ -1.75
PABPN1-204	ENST00000554062	KLHDC9	Q8NEP7	349 aa		4.14	□□□□□ -1.75
PABPN1-204	ENST00000554062	OR10G8	Q8NGN5	311 aa		4.14	□□□□□ -1.75
PABPN1-204	ENST00000554062	OR1L3	Q8NH93	324 aa		4.14	□□□□□ -1.75
PABPN1-204	ENST00000554062	UBTD2	Q8WUN7	234 aa		4.14	□□□□□ -1.75
PABPN1-204	ENST00000554062	PINX1	Q96BK5	328 aa	Known RBP	4.14	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms