RNA–Protein interactions for RNA: ENST00000553529.5

SHMT2-206, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-206ENST00000553529 SCYL1Q96KG9 808 aa16.98■□□□□ 0.31
SHMT2-206ENST00000553529 NPLQ9BXD5 320 aaPredicted RBP16.98■□□□□ 0.31
SHMT2-206ENST00000553529 EPB41L4BQ9H329 900 aa16.98■□□□□ 0.31
SHMT2-206ENST00000553529 NOL11Q9H8H0 719 aaKnown RBP16.98■□□□□ 0.31
SHMT2-206ENST00000553529 IPPKQ9H8X2 491 aa16.98■□□□□ 0.31
SHMT2-206ENST00000553529 ACTR8Q9H981 624 aa16.98■□□□□ 0.31
SHMT2-206ENST00000553529 ANGPTL3Q9Y5C1 460 aa16.98■□□□□ 0.31
SHMT2-206ENST00000553529 PINLYPA6NC86 204 aa16.97■□□□□ 0.31
SHMT2-206ENST00000553529 GLOD5A6NK44 160 aa16.97■□□□□ 0.31
SHMT2-206ENST00000553529 G3V3Y1 287 aa16.97■□□□□ 0.31
SHMT2-206ENST00000553529 IFNA16P05015 189 aa16.97■□□□□ 0.31
SHMT2-206ENST00000553529 SP1P08047 785 aa16.97■□□□□ 0.31
SHMT2-206ENST00000553529 MYBL2P10244 700 aa16.97■□□□□ 0.31
SHMT2-206ENST00000553529 HIST1H1TP22492 207 aaPredicted RBP16.97■□□□□ 0.31
SHMT2-206ENST00000553529 SSR2P43308 183 aa16.97■□□□□ 0.31
SHMT2-206ENST00000553529 HSD17B7P56937 341 aa16.97■□□□□ 0.31
SHMT2-206ENST00000553529 TAS2R50P59544 299 aa16.97■□□□□ 0.31
SHMT2-206ENST00000553529 ILF2Q12905 390 aaKnown RBP16.97■□□□□ 0.31
SHMT2-206ENST00000553529 SLAMF1Q13291 335 aa16.97■□□□□ 0.31
SHMT2-206ENST00000553529 LAPTM5Q13571 262 aa16.97■□□□□ 0.31
SHMT2-206ENST00000553529 HIST2H2ACQ16777 129 aaPredicted RBP16.97■□□□□ 0.31
SHMT2-206ENST00000553529 HIST2H2AA3Q6FI13 130 aa16.97■□□□□ 0.31
SHMT2-206ENST00000553529 NIPAL1Q6NVV3 410 aa16.97■□□□□ 0.31
SHMT2-206ENST00000553529 TMEM151AQ8N4L1 468 aa16.97■□□□□ 0.31
SHMT2-206ENST00000553529 SUN3Q8TAQ9 357 aa16.97■□□□□ 0.31
SHMT2-206ENST00000553529 KCNC2Q96PR1 638 aa16.97■□□□□ 0.31
SHMT2-206ENST00000553529 ALOXE3Q9BYJ1 711 aa16.97■□□□□ 0.31
SHMT2-206ENST00000553529 DEFB126Q9BYW3 111 aa16.97■□□□□ 0.31
SHMT2-206ENST00000553529 PITHD1Q9GZP4 211 aaPredicted RBP16.97■□□□□ 0.31
SHMT2-206ENST00000553529 FARSBQ9NSD9 589 aaKnown RBP16.97■□□□□ 0.31
SHMT2-206ENST00000553529 ABI3Q9P2A4 366 aa16.97■□□□□ 0.31
SHMT2-206ENST00000553529 ATG4BQ9Y4P1 393 aa16.97■□□□□ 0.31
SHMT2-206ENST00000553529 TRGV8A0A0C4DH27 118 aa16.96■□□□□ 0.31
SHMT2-206ENST00000553529 NPIPA5E9PKD4 350 aa16.96■□□□□ 0.31
SHMT2-206ENST00000553529 WWP2O00308 870 aa16.96■□□□□ 0.31
SHMT2-206ENST00000553529 ITGA10O75578 1167 aa16.96■□□□□ 0.31
SHMT2-206ENST00000553529 SLC25A12O75746 678 aa16.96■□□□□ 0.31
SHMT2-206ENST00000553529 DDAH2O95865 285 aa16.96■□□□□ 0.31
SHMT2-206ENST00000553529 STSP08842 583 aa16.96■□□□□ 0.31
SHMT2-206ENST00000553529 GSTM2P28161 218 aa16.96■□□□□ 0.31
SHMT2-206ENST00000553529 AP2B1P63010 937 aa16.96■□□□□ 0.31
SHMT2-206ENST00000553529 PCBP2Q15366 365 aaKnown RBP eCLIP16.96■□□□□ 0.31
SHMT2-206ENST00000553529 ZRSR2Q15696 482 aaKnown RBP16.96■□□□□ 0.31
SHMT2-206ENST00000553529 INAQ16352 499 aa16.96■□□□□ 0.31
SHMT2-206ENST00000553529 DEPDC1Q5TB30 811 aa16.96■□□□□ 0.31
SHMT2-206ENST00000553529 OR4C11Q6IEV9 310 aa16.96■□□□□ 0.31
SHMT2-206ENST00000553529 SLC25A25Q6KCM7 469 aa16.96■□□□□ 0.31
SHMT2-206ENST00000553529 FGD2Q7Z6J4 655 aa16.96■□□□□ 0.31
SHMT2-206ENST00000553529 SIAH3Q8IW03 269 aa16.96■□□□□ 0.31
SHMT2-206ENST00000553529 WDR20Q8TBZ3 569 aa16.96■□□□□ 0.31
SHMT2-206ENST00000553529 OR8D2Q9GZM6 311 aa16.96■□□□□ 0.31
SHMT2-206ENST00000553529 CLK4Q9HAZ1 481 aaKnown RBP16.96■□□□□ 0.31
SHMT2-206ENST00000553529 SEMA4BQ9NPR2 832 aaPredicted RBP16.96■□□□□ 0.31
SHMT2-206ENST00000553529 DEPPQ9NTK1 212 aa16.96■□□□□ 0.31
SHMT2-206ENST00000553529 SEC14L3Q9UDX4 400 aa16.96■□□□□ 0.31
SHMT2-206ENST00000553529 TINAGQ9UJW2 476 aa16.96■□□□□ 0.31
SHMT2-206ENST00000553529 PCTPQ9UKL6 214 aa16.96■□□□□ 0.31
SHMT2-206ENST00000553529 NPIPA1Q9UND3 350 aa16.96■□□□□ 0.31
SHMT2-206ENST00000553529 SYCE1LA8MT33 242 aa16.95■□□□□ 0.3
SHMT2-206ENST00000553529 NME2P1O60361 137 aa16.95■□□□□ 0.3
SHMT2-206ENST00000553529 CTNSO60931 367 aa16.95■□□□□ 0.3
SHMT2-206ENST00000553529 OR2J2O76002 312 aa16.95■□□□□ 0.3
SHMT2-206ENST00000553529 OR6B1O95007 311 aa16.95■□□□□ 0.3
SHMT2-206ENST00000553529 NME2P22392 152 aa16.95■□□□□ 0.3
SHMT2-206ENST00000553529 CPN2P22792 545 aa16.95■□□□□ 0.3
SHMT2-206ENST00000553529 PTGER1P34995 402 aa16.95■□□□□ 0.3
SHMT2-206ENST00000553529 BSGP35613 385 aa16.95■□□□□ 0.3
SHMT2-206ENST00000553529 CLCN2P51788 898 aa16.95■□□□□ 0.3
SHMT2-206ENST00000553529 CDH13P55290 713 aa16.95■□□□□ 0.3
SHMT2-206ENST00000553529 PCDH1Q08174 1060 aa16.95■□□□□ 0.3
SHMT2-206ENST00000553529 TRAF3Q13114 568 aa16.95■□□□□ 0.3
SHMT2-206ENST00000553529 CDSNQ15517 529 aa16.95■□□□□ 0.3
SHMT2-206ENST00000553529 C3AR1Q16581 482 aa16.95■□□□□ 0.3
SHMT2-206ENST00000553529 SGO1Q5FBB7 561 aa16.95■□□□□ 0.3
SHMT2-206ENST00000553529 TCHHL1Q5QJ38 904 aaPredicted RBP16.95■□□□□ 0.3
SHMT2-206ENST00000553529 CHERPQ8IWX8 916 aaKnown RBP16.95■□□□□ 0.3
SHMT2-206ENST00000553529 ZNF595Q8IYB9 648 aa16.95■□□□□ 0.3
SHMT2-206ENST00000553529 MMP21Q8N119 569 aa16.95■□□□□ 0.3
SHMT2-206ENST00000553529 ARMC2Q8NEN0 867 aa16.95■□□□□ 0.3
SHMT2-206ENST00000553529 SEC16BQ96JE7 1060 aa16.95■□□□□ 0.3
SHMT2-206ENST00000553529 HBEGFQ99075 208 aa16.95■□□□□ 0.3
SHMT2-206ENST00000553529 TBCDQ9BTW9 1192 aa16.95■□□□□ 0.3
SHMT2-206ENST00000553529 ADAP2Q9NPF8 381 aa16.95■□□□□ 0.3
SHMT2-206ENST00000553529 SPTAN1Q13813 2472 aaKnown RBP16.95■□□□□ 0.3
SHMT2-206ENST00000553529 RP1L1Q8IWN7 2480 aaPredicted RBP16.95■□□□□ 0.3
SHMT2-206ENST00000553529 ASPDHA6ND91 283 aa16.94■□□□□ 0.3
SHMT2-206ENST00000553529 C17orf105B2RV13 164 aa16.94■□□□□ 0.3
SHMT2-206ENST00000553529 GOLGA8RI6L899 631 aa16.94■□□□□ 0.3
SHMT2-206ENST00000553529 CLDN4O14493 209 aa16.94■□□□□ 0.3
SHMT2-206ENST00000553529 SCELO95171 688 aa16.94■□□□□ 0.3
SHMT2-206ENST00000553529 CD46P15529 392 aa16.94■□□□□ 0.3
SHMT2-206ENST00000553529 DCTP40126 519 aa16.94■□□□□ 0.3
SHMT2-206ENST00000553529 ARL1P40616 181 aaPredicted RBP16.94■□□□□ 0.3
SHMT2-206ENST00000553529 CYB561P49447 251 aa16.94■□□□□ 0.3
SHMT2-206ENST00000553529 RAP1GDS1P52306 607 aa16.94■□□□□ 0.3
SHMT2-206ENST00000553529 STX4Q12846 297 aa16.94■□□□□ 0.3
SHMT2-206ENST00000553529 AP5B1Q2VPB7 878 aa16.94■□□□□ 0.3
SHMT2-206ENST00000553529 C3P1Q6ZMU1 363 aa16.94■□□□□ 0.3
SHMT2-206ENST00000553529 MAMDC2Q7Z304 686 aaPredicted RBP16.94■□□□□ 0.3
SHMT2-206ENST00000553529 SULF2Q8IWU5 870 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms