RNA–Protein interactions for RNA: ENST00000553474.5

SHMT2-205, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-205ENST00000553474 SAXO2Q658L1 398 aa12.31□□□□□ -0.44
SHMT2-205ENST00000553474 LAIR1Q6GTX8 287 aa12.31□□□□□ -0.44
SHMT2-205ENST00000553474 PNCKQ6P2M8 343 aa12.31□□□□□ -0.44
SHMT2-205ENST00000553474 ZNF852Q6ZMS4 543 aa12.31□□□□□ -0.44
SHMT2-205ENST00000553474 VN1R5Q7Z5H4 357 aa12.31□□□□□ -0.44
SHMT2-205ENST00000553474 DNAJC22Q8N4W6 341 aa12.31□□□□□ -0.44
SHMT2-205ENST00000553474 SLC5A8Q8N695 610 aa12.31□□□□□ -0.44
SHMT2-205ENST00000553474 TTLQ8NG68 377 aa12.31□□□□□ -0.44
SHMT2-205ENST00000553474 MAFAQ8NHW3 353 aaPredicted RBP12.31□□□□□ -0.44
SHMT2-205ENST00000553474 C9orf43Q8TAL5 461 aaPredicted RBP12.31□□□□□ -0.44
SHMT2-205ENST00000553474 DYNC2LI1Q8TCX1 351 aa12.31□□□□□ -0.44
SHMT2-205ENST00000553474 SMPDL3AQ92484 453 aa12.31□□□□□ -0.44
SHMT2-205ENST00000553474 SMARCD2Q92925 531 aa12.31□□□□□ -0.44
SHMT2-205ENST00000553474 SLC38A4Q969I6 547 aa12.31□□□□□ -0.44
SHMT2-205ENST00000553474 ABTB1Q969K4 478 aaPredicted RBP12.31□□□□□ -0.44
SHMT2-205ENST00000553474 ASB16Q96NS5 453 aa12.31□□□□□ -0.44
SHMT2-205ENST00000553474 MS4A8Q9BY19 250 aa12.31□□□□□ -0.44
SHMT2-205ENST00000553474 SPNS1Q9H2V7 528 aa12.31□□□□□ -0.44
SHMT2-205ENST00000553474 AKIP1Q9NQ31 210 aa12.31□□□□□ -0.44
SHMT2-205ENST00000553474 ACSS1Q9NUB1 689 aaPredicted RBP12.31□□□□□ -0.44
SHMT2-205ENST00000553474 TAS2R7Q9NYW3 318 aa12.31□□□□□ -0.44
SHMT2-205ENST00000553474 CD207Q9UJ71 328 aa12.31□□□□□ -0.44
SHMT2-205ENST00000553474 ACSL5Q9ULC5 683 aa12.31□□□□□ -0.44
SHMT2-205ENST00000553474 PCDHGA2Q9Y5H1 932 aa12.31□□□□□ -0.44
SHMT2-205ENST00000553474 MYO10Q9HD67 2058 aa12.31□□□□□ -0.44
SHMT2-205ENST00000553474 hCG_2014768A0A024R1R8 64 aa12.3□□□□□ -0.44
SHMT2-205ENST00000553474 PLK4O00444 970 aa12.3□□□□□ -0.44
SHMT2-205ENST00000553474 KPNA4O00629 521 aaPredicted RBP12.3□□□□□ -0.44
SHMT2-205ENST00000553474 PLPP1O14494 284 aa12.3□□□□□ -0.44
SHMT2-205ENST00000553474 KMOO15229 486 aa12.3□□□□□ -0.44
SHMT2-205ENST00000553474 GADD45GO95257 159 aa12.3□□□□□ -0.44
SHMT2-205ENST00000553474 CDK1P06493 297 aa12.3□□□□□ -0.44
SHMT2-205ENST00000553474 OCM2P0CE71 109 aa12.3□□□□□ -0.44
SHMT2-205ENST00000553474 OCMP0CE72 109 aaPredicted RBP12.3□□□□□ -0.44
SHMT2-205ENST00000553474 P2RY2P41231 377 aa12.3□□□□□ -0.44
SHMT2-205ENST00000553474 ARFIP1P53367 373 aa12.3□□□□□ -0.44
SHMT2-205ENST00000553474 METAP1P53582 386 aa12.3□□□□□ -0.44
SHMT2-205ENST00000553474 CDH12P55289 794 aa12.3□□□□□ -0.44
SHMT2-205ENST00000553474 CDC42P60953 191 aa12.3□□□□□ -0.44
SHMT2-205ENST00000553474 REEP5Q00765 189 aa12.3□□□□□ -0.44
SHMT2-205ENST00000553474 CNTN1Q12860 1018 aa12.3□□□□□ -0.44
SHMT2-205ENST00000553474 ADPRMQ3LIE5 342 aa12.3□□□□□ -0.44
SHMT2-205ENST00000553474 ANKDD1AQ495B1 522 aa12.3□□□□□ -0.44
SHMT2-205ENST00000553474 CCDC81Q6ZN84 652 aa12.3□□□□□ -0.44
SHMT2-205ENST00000553474 AHSA2Q719I0 299 aa12.3□□□□□ -0.44
SHMT2-205ENST00000553474 NUDT13Q86X67 352 aa12.3□□□□□ -0.44
SHMT2-205ENST00000553474 OR5AR1Q8NGP9 310 aa12.3□□□□□ -0.44
SHMT2-205ENST00000553474 PSMA8Q8TAA3 256 aa12.3□□□□□ -0.44
SHMT2-205ENST00000553474 LGALS12Q96DT0 336 aa12.3□□□□□ -0.44
SHMT2-205ENST00000553474 ZBED6CLQ96FA7 236 aaPredicted RBP12.3□□□□□ -0.44
SHMT2-205ENST00000553474 CRELD1Q96HD1 420 aa12.3□□□□□ -0.44
SHMT2-205ENST00000553474 TRPV4Q9HBA0 871 aa12.3□□□□□ -0.44
SHMT2-205ENST00000553474 ACER3Q9NUN7 267 aa12.3□□□□□ -0.44
SHMT2-205ENST00000553474 CNOT2Q9NZN8 540 aaKnown RBP12.3□□□□□ -0.44
SHMT2-205ENST00000553474 MAP4K5Q9Y4K4 846 aa12.3□□□□□ -0.44
SHMT2-205ENST00000553474 CCDC88CQ9P219 2028 aa12.3□□□□□ -0.44
SHMT2-205ENST00000553474 HEPACAM2A8MVW5 462 aa12.3□□□□□ -0.44
SHMT2-205ENST00000553474 C5orf58C9J3I9 102 aa12.3□□□□□ -0.44
SHMT2-205ENST00000553474 SAP18O00422 153 aaKnown RBP12.3□□□□□ -0.44
SHMT2-205ENST00000553474 PDPK1O15530 556 aa12.3□□□□□ -0.44
SHMT2-205ENST00000553474 KCNJ13O60928 360 aa12.3□□□□□ -0.44
SHMT2-205ENST00000553474 CCNB2O95067 398 aa12.3□□□□□ -0.44
SHMT2-205ENST00000553474 OXSR1O95747 527 aaPredicted RBP12.3□□□□□ -0.44
SHMT2-205ENST00000553474 GBAP04062 536 aa12.3□□□□□ -0.44
SHMT2-205ENST00000553474 CD36P16671 472 aa12.3□□□□□ -0.44
SHMT2-205ENST00000553474 GABRB1P18505 474 aa12.3□□□□□ -0.44
SHMT2-205ENST00000553474 FSHRP23945 695 aa12.3□□□□□ -0.44
SHMT2-205ENST00000553474 SOAT1P35610 550 aa12.3□□□□□ -0.44
SHMT2-205ENST00000553474 BSGP35613 385 aa12.3□□□□□ -0.44
SHMT2-205ENST00000553474 OPRL1P41146 370 aa12.3□□□□□ -0.44
SHMT2-205ENST00000553474 EIF2DP41214 584 aaKnown RBP12.3□□□□□ -0.44
SHMT2-205ENST00000553474 MAP2K4P45985 399 aa12.3□□□□□ -0.44
SHMT2-205ENST00000553474 SLC6A11P48066 632 aa12.3□□□□□ -0.44
SHMT2-205ENST00000553474 CDK3Q00526 305 aa12.3□□□□□ -0.44
SHMT2-205ENST00000553474 DMPKQ09013 629 aa12.3□□□□□ -0.44
SHMT2-205ENST00000553474 COL19A1Q14993 1142 aa12.3□□□□□ -0.44
SHMT2-205ENST00000553474 SMN1Q16637 294 aaKnown RBP12.3□□□□□ -0.44
SHMT2-205ENST00000553474 EXOC3L2Q2M3D2 409 aa12.3□□□□□ -0.44
SHMT2-205ENST00000553474 TOR1AIP1Q5JTV8 583 aa12.3□□□□□ -0.44
SHMT2-205ENST00000553474 COLEC12Q5KU26 742 aa12.3□□□□□ -0.44
SHMT2-205ENST00000553474 ATAT1Q5SQI0 421 aa12.3□□□□□ -0.44
SHMT2-205ENST00000553474 NIPAL1Q6NVV3 410 aa12.3□□□□□ -0.44
SHMT2-205ENST00000553474 FAM83HQ6ZRV2 1179 aaPredicted RBP12.3□□□□□ -0.44
SHMT2-205ENST00000553474 ADCK1Q86TW2 530 aa12.3□□□□□ -0.44
SHMT2-205ENST00000553474 HEATR4Q86WZ0 1026 aa12.3□□□□□ -0.44
SHMT2-205ENST00000553474 TMCO5AQ8N6Q1 288 aa12.3□□□□□ -0.44
SHMT2-205ENST00000553474 SMRP1Q8NCR6 262 aa12.3□□□□□ -0.44
SHMT2-205ENST00000553474 DNASE1L2Q92874 299 aa12.3□□□□□ -0.44
SHMT2-205ENST00000553474 HLA-CQ95604 372 aa12.3□□□□□ -0.44
SHMT2-205ENST00000553474 RSPRY1Q96DX4 576 aa12.3□□□□□ -0.44
SHMT2-205ENST00000553474 MSLNLQ96KJ4 702 aa12.3□□□□□ -0.44
SHMT2-205ENST00000553474 RIPOR3Q96MK2 946 aa12.3□□□□□ -0.44
SHMT2-205ENST00000553474 DACH2Q96NX9 599 aa12.3□□□□□ -0.44
SHMT2-205ENST00000553474 COL21A1Q96P44 957 aa12.3□□□□□ -0.44
SHMT2-205ENST00000553474 KCNC2Q96PR1 638 aa12.3□□□□□ -0.44
SHMT2-205ENST00000553474 RAB11FIP5Q9BXF6 653 aa12.3□□□□□ -0.44
SHMT2-205ENST00000553474 ZNF717Q9BY31 904 aaPredicted RBP12.3□□□□□ -0.44
SHMT2-205ENST00000553474 IMPAD1Q9NX62 359 aa12.3□□□□□ -0.44
SHMT2-205ENST00000553474 GDE1Q9NZC3 331 aa12.3□□□□□ -0.44
SHMT2-205ENST00000553474 EHD3Q9NZN3 535 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms