RNA–Protein interactions for RNA: ENST00000553405.1

MTHFD1-204, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 833 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-204ENST00000553405 NR6A1Q15406 480 aa13.97□□□□□ -0.17
MTHFD1-204ENST00000553405 TUBB8Q3ZCM7 444 aa13.97□□□□□ -0.17
MTHFD1-204ENST00000553405 CRTC2Q53ET0 693 aaPredicted RBP13.97□□□□□ -0.17
MTHFD1-204ENST00000553405 C18orf63Q68DL7 685 aa13.97□□□□□ -0.17
MTHFD1-204ENST00000553405 NOXRED1Q6NXP6 359 aa13.97□□□□□ -0.17
MTHFD1-204ENST00000553405 TMEM205Q6UW68 189 aa13.97□□□□□ -0.17
MTHFD1-204ENST00000553405 RIPOR1Q6ZS17 1223 aa13.97□□□□□ -0.17
MTHFD1-204ENST00000553405 SHISA6Q6ZSJ9 500 aa13.97□□□□□ -0.17
MTHFD1-204ENST00000553405 PAGE2Q7Z2X7 111 aa13.97□□□□□ -0.17
MTHFD1-204ENST00000553405 PPP1R32Q7Z5V6 425 aa13.97□□□□□ -0.17
MTHFD1-204ENST00000553405 GPR180Q86V85 440 aa13.97□□□□□ -0.17
MTHFD1-204ENST00000553405 CRLF3Q8IUI8 442 aa13.97□□□□□ -0.17
MTHFD1-204ENST00000553405 MMP21Q8N119 569 aa13.97□□□□□ -0.17
MTHFD1-204ENST00000553405 PLPP5Q8NEB5 264 aa13.97□□□□□ -0.17
MTHFD1-204ENST00000553405 STARD8Q92502 1023 aa13.97□□□□□ -0.17
MTHFD1-204ENST00000553405 CCNL2Q96S94 520 aaPredicted RBP13.97□□□□□ -0.17
MTHFD1-204ENST00000553405 AKTIPQ9H8T0 292 aa13.97□□□□□ -0.17
MTHFD1-204ENST00000553405 ASIC5Q9NY37 505 aa13.97□□□□□ -0.17
MTHFD1-204ENST00000553405 VTI1BQ9UEU0 232 aa13.97□□□□□ -0.17
MTHFD1-204ENST00000553405 CES1P1Q9UKY3 287 aa13.97□□□□□ -0.17
MTHFD1-204ENST00000553405 PTRH2Q9Y3E5 179 aaKnown RBP13.97□□□□□ -0.17
MTHFD1-204ENST00000553405 USH1CQ9Y6N9 552 aa13.97□□□□□ -0.17
MTHFD1-204ENST00000553405 BSNQ9UPA5 3926 aa13.96□□□□□ -0.17
MTHFD1-204ENST00000553405 WASHC1A8K0Z3 465 aa13.96□□□□□ -0.17
MTHFD1-204ENST00000553405 IDSB3KWA1 339 aa13.96□□□□□ -0.17
MTHFD1-204ENST00000553405 SLCO1B7G3V0H7 640 aa13.96□□□□□ -0.17
MTHFD1-204ENST00000553405 PEX11AO75192 247 aa13.96□□□□□ -0.17
MTHFD1-204ENST00000553405 AIFM1O95831 613 aa13.96□□□□□ -0.17
MTHFD1-204ENST00000553405 CYC1P08574 325 aa13.96□□□□□ -0.17
MTHFD1-204ENST00000553405 CD63P08962 238 aa13.96□□□□□ -0.17
MTHFD1-204ENST00000553405 KITP10721 976 aa13.96□□□□□ -0.17
MTHFD1-204ENST00000553405 SDC1P18827 310 aa13.96□□□□□ -0.17
MTHFD1-204ENST00000553405 RPS15P62841 145 aaKnown RBP13.96□□□□□ -0.17
MTHFD1-204ENST00000553405 TRA2BP62995 288 aaKnown RBP13.96□□□□□ -0.17
MTHFD1-204ENST00000553405 RPL38P63173 70 aaKnown RBP13.96□□□□□ -0.17
MTHFD1-204ENST00000553405 BTG2P78543 158 aa13.96□□□□□ -0.17
MTHFD1-204ENST00000553405 IGLV3-21P80748 117 aaPredicted RBP13.96□□□□□ -0.17
MTHFD1-204ENST00000553405 IMPG1Q17R60 797 aa13.96□□□□□ -0.17
MTHFD1-204ENST00000553405 SMU1Q2TAY7 513 aa13.96□□□□□ -0.17
MTHFD1-204ENST00000553405 SLC9B1Q4ZJI4 515 aa13.96□□□□□ -0.17
MTHFD1-204ENST00000553405 SPDYAQ5MJ70 313 aa13.96□□□□□ -0.17
MTHFD1-204ENST00000553405 CCNYL2Q5T2Q4 361 aa13.96□□□□□ -0.17
MTHFD1-204ENST00000553405 EPGNQ6UW88 154 aa13.96□□□□□ -0.17
MTHFD1-204ENST00000553405 QSOX2Q6ZRP7 698 aa13.96□□□□□ -0.17
MTHFD1-204ENST00000553405 PRSS58Q8IYP2 241 aa13.96□□□□□ -0.17
MTHFD1-204ENST00000553405 LRRC34Q8IZ02 419 aa13.96□□□□□ -0.17
MTHFD1-204ENST00000553405 FAM47BQ8NA70 645 aa13.96□□□□□ -0.17
MTHFD1-204ENST00000553405 ADAMTS18Q8TE60 1221 aa13.96□□□□□ -0.17
MTHFD1-204ENST00000553405 C16orf78Q8WTQ4 265 aa13.96□□□□□ -0.17
MTHFD1-204ENST00000553405 SNRNP27Q8WVK2 155 aaKnown RBP13.96□□□□□ -0.17
MTHFD1-204ENST00000553405 TSLPQ969D9 159 aa13.96□□□□□ -0.17
MTHFD1-204ENST00000553405 KIAA1143Q96AT1 154 aaPredicted RBP13.96□□□□□ -0.17
MTHFD1-204ENST00000553405 ANKRD9Q96BM1 317 aaPredicted RBP13.96□□□□□ -0.17
MTHFD1-204ENST00000553405 PPP3R2Q96LZ3 170 aa13.96□□□□□ -0.17
MTHFD1-204ENST00000553405 CNTNAP3BQ96NU0 1288 aa13.96□□□□□ -0.17
MTHFD1-204ENST00000553405 EBPLQ9BY08 206 aa13.96□□□□□ -0.17
MTHFD1-204ENST00000553405 CNTNAP3Q9BZ76 1288 aa13.96□□□□□ -0.17
MTHFD1-204ENST00000553405 WDR55Q9H6Y2 383 aaPredicted RBP13.96□□□□□ -0.17
MTHFD1-204ENST00000553405 HEY2Q9UBP5 337 aa13.96□□□□□ -0.17
MTHFD1-204ENST00000553405 GPN3Q9UHW5 284 aaPredicted RBP13.96□□□□□ -0.17
MTHFD1-204ENST00000553405 PHF11Q9UIL8 331 aa13.96□□□□□ -0.17
MTHFD1-204ENST00000553405 FBXW2Q9UKT8 454 aa13.96□□□□□ -0.17
MTHFD1-204ENST00000553405 PADI2Q9Y2J8 665 aa13.96□□□□□ -0.17
MTHFD1-204ENST00000553405 TMED5Q9Y3A6 229 aa13.96□□□□□ -0.17
MTHFD1-204ENST00000553405 POLR3HQ9Y535 204 aaPredicted RBP13.96□□□□□ -0.17
MTHFD1-204ENST00000553405 HS3ST3B1Q9Y662 390 aa13.96□□□□□ -0.17
MTHFD1-204ENST00000553405 LOC102723996A0A087X1L8 192 aa13.95□□□□□ -0.18
MTHFD1-204ENST00000553405 SOCS6O14544 535 aa13.95□□□□□ -0.18
MTHFD1-204ENST00000553405 PGRMC2O15173 223 aa13.95□□□□□ -0.18
MTHFD1-204ENST00000553405 NKX2-8O15522 239 aa13.95□□□□□ -0.18
MTHFD1-204ENST00000553405 SEC22BO75396 215 aa13.95□□□□□ -0.18
MTHFD1-204ENST00000553405 CDC123O75794 336 aaPredicted RBP13.95□□□□□ -0.18
MTHFD1-204ENST00000553405 ANXA4P09525 319 aaPredicted RBP13.95□□□□□ -0.18
MTHFD1-204ENST00000553405 BCKDHAP12694 445 aa13.95□□□□□ -0.18
MTHFD1-204ENST00000553405 MMP11P24347 488 aa13.95□□□□□ -0.18
MTHFD1-204ENST00000553405 EPHA3P29320 983 aa13.95□□□□□ -0.18
MTHFD1-204ENST00000553405 FOLR3P41439 243 aa13.95□□□□□ -0.18
MTHFD1-204ENST00000553405 MAPK12P53778 367 aa13.95□□□□□ -0.18
MTHFD1-204ENST00000553405 UGT8Q16880 541 aa13.95□□□□□ -0.18
MTHFD1-204ENST00000553405 PRSS53Q2L4Q9 553 aa13.95□□□□□ -0.18
MTHFD1-204ENST00000553405 ATP1A1-AS1Q5TC04 95 aa13.95□□□□□ -0.18
MTHFD1-204ENST00000553405 NDUFAF5Q5TEU4 345 aa13.95□□□□□ -0.18
MTHFD1-204ENST00000553405 FAM71E1Q6IPT2 247 aa13.95□□□□□ -0.18
MTHFD1-204ENST00000553405 OGFOD2Q6N063 350 aa13.95□□□□□ -0.18
MTHFD1-204ENST00000553405 CYP20A1Q6UW02 462 aa13.95□□□□□ -0.18
MTHFD1-204ENST00000553405 ZNF595Q8IYB9 648 aa13.95□□□□□ -0.18
MTHFD1-204ENST00000553405 DNAJB14Q8TBM8 379 aa13.95□□□□□ -0.18
MTHFD1-204ENST00000553405 ACTRT2Q8TDY3 377 aa13.95□□□□□ -0.18
MTHFD1-204ENST00000553405 STON2Q8WXE9 905 aa13.95□□□□□ -0.18
MTHFD1-204ENST00000553405 EGLN2Q96KS0 407 aa13.95□□□□□ -0.18
MTHFD1-204ENST00000553405 PPP1R36Q96LQ0 422 aa13.95□□□□□ -0.18
MTHFD1-204ENST00000553405 OR52B2Q96RD2 323 aa13.95□□□□□ -0.18
MTHFD1-204ENST00000553405 WDR77Q9BQA1 342 aaPredicted RBP13.95□□□□□ -0.18
MTHFD1-204ENST00000553405 CRB3Q9BUF7 120 aa13.95□□□□□ -0.18
MTHFD1-204ENST00000553405 EFHD1Q9BUP0 239 aa13.95□□□□□ -0.18
MTHFD1-204ENST00000553405 YIPF2Q9BWQ6 316 aa13.95□□□□□ -0.18
MTHFD1-204ENST00000553405 KCNK13Q9HB14 408 aa13.95□□□□□ -0.18
MTHFD1-204ENST00000553405 MYNNQ9NPC7 610 aa13.95□□□□□ -0.18
MTHFD1-204ENST00000553405 NECTIN3Q9NQS3 549 aa13.95□□□□□ -0.18
MTHFD1-204ENST00000553405 PRDM9Q9NQV7 894 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms