RNA–Protein interactions for RNA: ENST00000552896.1

TRAFD1-209, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 3

Gene TRAFD1, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-209ENST00000552896 EEDO75530 441 aaKnown RBP11□□□□□ -0.65
TRAFD1-209ENST00000552896 ALPPP05187 535 aa11□□□□□ -0.65
TRAFD1-209ENST00000552896 BPGMP07738 259 aa11□□□□□ -0.65
TRAFD1-209ENST00000552896 MAOAP21397 527 aa11□□□□□ -0.65
TRAFD1-209ENST00000552896 ITGA3P26006 1051 aa11□□□□□ -0.65
TRAFD1-209ENST00000552896 SERPINB4P48594 390 aa11□□□□□ -0.65
TRAFD1-209ENST00000552896 HTR6P50406 440 aa11□□□□□ -0.65
TRAFD1-209ENST00000552896 CCL11P51671 97 aa11□□□□□ -0.65
TRAFD1-209ENST00000552896 HNRNPH2P55795 449 aaKnown RBP11□□□□□ -0.65
TRAFD1-209ENST00000552896 TNFRSF17Q02223 184 aa11□□□□□ -0.65
TRAFD1-209ENST00000552896 Q0VFX4 171 aa11□□□□□ -0.65
TRAFD1-209ENST00000552896 GALNT1Q10472 559 aaPredicted RBP11□□□□□ -0.65
TRAFD1-209ENST00000552896 TERF2Q15554 542 aa11□□□□□ -0.65
TRAFD1-209ENST00000552896 SFT2D3Q587I9 215 aa11□□□□□ -0.65
TRAFD1-209ENST00000552896 SGO1Q5FBB7 561 aa11□□□□□ -0.65
TRAFD1-209ENST00000552896 IRAK1BP1Q5VVH5 260 aa11□□□□□ -0.65
TRAFD1-209ENST00000552896 PLAG1Q6DJT9 500 aa11□□□□□ -0.65
TRAFD1-209ENST00000552896 MRM1Q6IN84 353 aaKnown RBP11□□□□□ -0.65
TRAFD1-209ENST00000552896 HPS6Q86YV9 775 aa11□□□□□ -0.65
TRAFD1-209ENST00000552896 HOMEZQ8IX15 550 aa11□□□□□ -0.65
TRAFD1-209ENST00000552896 KBTBD2Q8IY47 623 aa11□□□□□ -0.65
TRAFD1-209ENST00000552896 METTL4Q8N3J2 472 aa11□□□□□ -0.65
TRAFD1-209ENST00000552896 TMEM52Q8NDY8 209 aa11□□□□□ -0.65
TRAFD1-209ENST00000552896 FDCSPQ8NFU4 85 aa11□□□□□ -0.65
TRAFD1-209ENST00000552896 MTFMTQ96DP5 389 aaKnown RBP11□□□□□ -0.65
TRAFD1-209ENST00000552896 PKNOX2Q96KN3 472 aa11□□□□□ -0.65
TRAFD1-209ENST00000552896 PTCHD1Q96NR3 888 aa11□□□□□ -0.65
TRAFD1-209ENST00000552896 KCNA7Q96RP8 456 aa11□□□□□ -0.65
TRAFD1-209ENST00000552896 HBEGFQ99075 208 aa11□□□□□ -0.65
TRAFD1-209ENST00000552896 SMAD5Q99717 465 aaKnown RBP11□□□□□ -0.65
TRAFD1-209ENST00000552896 WDR77Q9BQA1 342 aaPredicted RBP11□□□□□ -0.65
TRAFD1-209ENST00000552896 NUDT9Q9BW91 350 aa11□□□□□ -0.65
TRAFD1-209ENST00000552896 MRPL1Q9BYD6 325 aaKnown RBP11□□□□□ -0.65
TRAFD1-209ENST00000552896 ACPTQ9BZG2 426 aa11□□□□□ -0.65
TRAFD1-209ENST00000552896 LHPPQ9H008 270 aa11□□□□□ -0.65
TRAFD1-209ENST00000552896 PRTFDC1Q9NRG1 225 aa11□□□□□ -0.65
TRAFD1-209ENST00000552896 AHSPQ9NZD4 102 aa11□□□□□ -0.65
TRAFD1-209ENST00000552896 ZNF451Q9Y4E5 1061 aa11□□□□□ -0.65
TRAFD1-209ENST00000552896 SAGE2PA6NJ88 616 aa10.99□□□□□ -0.65
TRAFD1-209ENST00000552896 A6NL46 340 aa10.99□□□□□ -0.65
TRAFD1-209ENST00000552896 EIF4E1BA6NMX2 242 aaKnown RBP10.99□□□□□ -0.65
TRAFD1-209ENST00000552896 MASP2O00187 686 aa10.99□□□□□ -0.65
TRAFD1-209ENST00000552896 BIRC5O15392 142 aa10.99□□□□□ -0.65
TRAFD1-209ENST00000552896 TMPRSS11DO60235 418 aa10.99□□□□□ -0.65
TRAFD1-209ENST00000552896 CRCPO75575 148 aa10.99□□□□□ -0.65
TRAFD1-209ENST00000552896 C1QL1O75973 258 aa10.99□□□□□ -0.65
TRAFD1-209ENST00000552896 SEC24DO94855 1032 aaPredicted RBP10.99□□□□□ -0.65
TRAFD1-209ENST00000552896 SERPINA7P05543 415 aa10.99□□□□□ -0.65
TRAFD1-209ENST00000552896 PRR35P0CG20 571 aa10.99□□□□□ -0.65
TRAFD1-209ENST00000552896 DHRS4L1P0CG22 281 aa10.99□□□□□ -0.65
TRAFD1-209ENST00000552896 NR2F6P10588 404 aa10.99□□□□□ -0.65
TRAFD1-209ENST00000552896 UROSP10746 265 aa10.99□□□□□ -0.65
TRAFD1-209ENST00000552896 ICAM2P13598 275 aa10.99□□□□□ -0.65
TRAFD1-209ENST00000552896 HOXB1P14653 301 aaPredicted RBP10.99□□□□□ -0.65
TRAFD1-209ENST00000552896 CPN2P22792 545 aa10.99□□□□□ -0.65
TRAFD1-209ENST00000552896 PPP2R1BP30154 601 aa10.99□□□□□ -0.65
TRAFD1-209ENST00000552896 BUD31P41223 144 aaPredicted RBP10.99□□□□□ -0.65
TRAFD1-209ENST00000552896 HNRNPFP52597 415 aaKnown RBP10.99□□□□□ -0.65
TRAFD1-209ENST00000552896 FOXA1P55317 472 aa10.99□□□□□ -0.65
TRAFD1-209ENST00000552896 OR4D2P58180 307 aa10.99□□□□□ -0.65
TRAFD1-209ENST00000552896 BTG2P78543 158 aa10.99□□□□□ -0.65
TRAFD1-209ENST00000552896 TBL3Q12788 808 aaKnown RBP10.99□□□□□ -0.65
TRAFD1-209ENST00000552896 SLC13A2Q13183 592 aa10.99□□□□□ -0.65
TRAFD1-209ENST00000552896 SLAMF1Q13291 335 aa10.99□□□□□ -0.65
TRAFD1-209ENST00000552896 EXT1Q16394 746 aa10.99□□□□□ -0.65
TRAFD1-209ENST00000552896 SPIN4Q56A73 249 aa10.99□□□□□ -0.65
TRAFD1-209ENST00000552896 FAM219BQ5XKK7 198 aa10.99□□□□□ -0.65
TRAFD1-209ENST00000552896 JMJD6Q6NYC1 403 aaPredicted RBP10.99□□□□□ -0.65
TRAFD1-209ENST00000552896 PAPD4Q6PIY7 484 aaKnown RBP10.99□□□□□ -0.65
TRAFD1-209ENST00000552896 CYP20A1Q6UW02 462 aa10.99□□□□□ -0.65
TRAFD1-209ENST00000552896 RNF165Q6ZSG1 346 aa10.99□□□□□ -0.65
TRAFD1-209ENST00000552896 COMMD6Q7Z4G1 85 aa10.99□□□□□ -0.65
TRAFD1-209ENST00000552896 CUZD1Q86UP6 607 aa10.99□□□□□ -0.65
TRAFD1-209ENST00000552896 GPR180Q86V85 440 aa10.99□□□□□ -0.65
TRAFD1-209ENST00000552896 C7orf57Q8NEG2 295 aa10.99□□□□□ -0.65
TRAFD1-209ENST00000552896 OR6Y1Q8NGX8 325 aa10.99□□□□□ -0.65
TRAFD1-209ENST00000552896 TLCD1Q96CP7 247 aa10.99□□□□□ -0.65
TRAFD1-209ENST00000552896 IMMP1LQ96LU5 166 aa10.99□□□□□ -0.65
TRAFD1-209ENST00000552896 LPAR4Q99677 370 aa10.99□□□□□ -0.65
TRAFD1-209ENST00000552896 KRTAP3-3Q9BYR6 98 aa10.99□□□□□ -0.65
TRAFD1-209ENST00000552896 KRTAP3-2Q9BYR7 98 aa10.99□□□□□ -0.65
TRAFD1-209ENST00000552896 TMBIM4Q9HC24 238 aa10.99□□□□□ -0.65
TRAFD1-209ENST00000552896 EML4Q9HC35 981 aaKnown RBP10.99□□□□□ -0.65
TRAFD1-209ENST00000552896 TNFRSF12AQ9NP84 129 aa10.99□□□□□ -0.65
TRAFD1-209ENST00000552896 NECTIN3Q9NQS3 549 aa10.99□□□□□ -0.65
TRAFD1-209ENST00000552896 C5AR2Q9P296 337 aa10.99□□□□□ -0.65
TRAFD1-209ENST00000552896 VPS29Q9UBQ0 182 aa10.99□□□□□ -0.65
TRAFD1-209ENST00000552896 FBXW2Q9UKT8 454 aa10.99□□□□□ -0.65
TRAFD1-209ENST00000552896 TIMM22Q9Y584 194 aa10.99□□□□□ -0.65
TRAFD1-209ENST00000552896 CLDN16Q9Y5I7 305 aa10.99□□□□□ -0.65
TRAFD1-209ENST00000552896 SPENQ96T58 3664 aaKnown RBP10.99□□□□□ -0.65
TRAFD1-209ENST00000552896 ZNF462Q96JM2 2506 aa10.98□□□□□ -0.65
TRAFD1-209ENST00000552896 IGHV3-20A0A0C4DH32 117 aa10.98□□□□□ -0.65
TRAFD1-209ENST00000552896 ARHGAP10A1A4S6 786 aa10.98□□□□□ -0.65
TRAFD1-209ENST00000552896 TGFBR3LH3BV60 316 aa10.98□□□□□ -0.65
TRAFD1-209ENST00000552896 AZIN1O14977 448 aa10.98□□□□□ -0.65
TRAFD1-209ENST00000552896 CTNSO60931 367 aa10.98□□□□□ -0.65
TRAFD1-209ENST00000552896 PDGFAP04085 211 aa10.98□□□□□ -0.65
TRAFD1-209ENST00000552896 FAM58BPP0C7Q3 252 aa10.98□□□□□ -0.65
TRAFD1-209ENST00000552896 TPP2P29144 1249 aaPredicted RBP10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms