RNA–Protein interactions for RNA: ENST00000550335.5

HCFC2-204, Transcript of host cell factor C2, humanhuman

TSL 5

Gene HCFC2, Length 1,223 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-204ENST00000550335 ZNF195O14628 629 aa5.08□□□□□ -1.6
HCFC2-204ENST00000550335 ACOT8O14734 319 aa5.08□□□□□ -1.6
HCFC2-204ENST00000550335 INSIG1O15503 277 aa5.08□□□□□ -1.6
HCFC2-204ENST00000550335 GRID2O43424 1007 aa5.08□□□□□ -1.6
HCFC2-204ENST00000550335 NME2P1O60361 137 aa5.08□□□□□ -1.6
HCFC2-204ENST00000550335 SYNGR4O95473 234 aa5.08□□□□□ -1.6
HCFC2-204ENST00000550335 CXCL10P02778 98 aa5.08□□□□□ -1.6
HCFC2-204ENST00000550335 ZCCHC18P0CG32 403 aa5.08□□□□□ -1.6
HCFC2-204ENST00000550335 TSPY4P0CV99 314 aa5.08□□□□□ -1.6
HCFC2-204ENST00000550335 TSPY10P0CW01 314 aa5.08□□□□□ -1.6
HCFC2-204ENST00000550335 FGF3P11487 239 aaPredicted RBP5.08□□□□□ -1.6
HCFC2-204ENST00000550335 AADACP22760 399 aa5.08□□□□□ -1.6
HCFC2-204ENST00000550335 XGP55808 180 aa5.08□□□□□ -1.6
HCFC2-204ENST00000550335 OR1D5P58170 312 aa5.08□□□□□ -1.6
HCFC2-204ENST00000550335 GABPAQ06546 454 aa5.08□□□□□ -1.6
HCFC2-204ENST00000550335 ARL16Q0P5N6 197 aa5.08□□□□□ -1.6
HCFC2-204ENST00000550335 FHL1Q13642 323 aa5.08□□□□□ -1.6
HCFC2-204ENST00000550335 HERC4Q5GLZ8 1057 aaPredicted RBP5.08□□□□□ -1.6
HCFC2-204ENST00000550335 NKAIN2Q5VXU1 208 aa5.08□□□□□ -1.6
HCFC2-204ENST00000550335 RTL6Q6ICC9 239 aa5.08□□□□□ -1.6
HCFC2-204ENST00000550335 ZNF771Q7L3S4 317 aaPredicted RBP5.08□□□□□ -1.6
HCFC2-204ENST00000550335 PTAR1Q7Z6K3 402 aaPredicted RBP5.08□□□□□ -1.6
HCFC2-204ENST00000550335 SYVN1Q86TM6 617 aa5.08□□□□□ -1.6
HCFC2-204ENST00000550335 TEX26Q8N6G2 289 aa5.08□□□□□ -1.6
HCFC2-204ENST00000550335 LRRC17Q8N6Y2 441 aa5.08□□□□□ -1.6
HCFC2-204ENST00000550335 KLHDC9Q8NEP7 349 aa5.08□□□□□ -1.6
HCFC2-204ENST00000550335 OR2T11Q8NH01 316 aa5.08□□□□□ -1.6
HCFC2-204ENST00000550335 GIMAP5Q96F15 307 aa5.08□□□□□ -1.6
HCFC2-204ENST00000550335 VPS39Q96JC1 886 aa5.08□□□□□ -1.6
HCFC2-204ENST00000550335 RPGRIP1Q96KN7 1286 aa5.08□□□□□ -1.6
HCFC2-204ENST00000550335 ERGIC2Q96RQ1 377 aa5.08□□□□□ -1.6
HCFC2-204ENST00000550335 THUMPD2Q9BTF0 503 aaKnown RBP5.08□□□□□ -1.6
HCFC2-204ENST00000550335 GANQ9H2C0 597 aa5.08□□□□□ -1.6
HCFC2-204ENST00000550335 ATP13A3Q9H7F0 1226 aa5.08□□□□□ -1.6
HCFC2-204ENST00000550335 COQ10BQ9H8M1 238 aa5.08□□□□□ -1.6
HCFC2-204ENST00000550335 HPS4Q9NQG7 708 aa5.08□□□□□ -1.6
HCFC2-204ENST00000550335 AATFQ9NY61 560 aaKnown RBP eCLIP5.08□□□□□ -1.6
HCFC2-204ENST00000550335 ERVK-18Q9QC07 812 aa5.08□□□□□ -1.6
HCFC2-204ENST00000550335 SELENOKQ9Y6D0 94 aa5.08□□□□□ -1.6
HCFC2-204ENST00000550335 MAP3K1Q13233 1512 aa5.07□□□□□ -1.6
HCFC2-204ENST00000550335 ZNF518AQ6AHZ1 1483 aa5.07□□□□□ -1.6
HCFC2-204ENST00000550335 POGZQ7Z3K3 1410 aa5.07□□□□□ -1.6
HCFC2-204ENST00000550335 VPS8Q8N3P4 1428 aa5.07□□□□□ -1.6
HCFC2-204ENST00000550335 KIF7Q2M1P5 1343 aa5.07□□□□□ -1.6
HCFC2-204ENST00000550335 GLTPD2A6NH11 291 aa5.07□□□□□ -1.6
HCFC2-204ENST00000550335 TCP10L2B9ZVM9 353 aa5.07□□□□□ -1.6
HCFC2-204ENST00000550335 KRT86O43790 486 aa5.07□□□□□ -1.6
HCFC2-204ENST00000550335 LMX1BO60663 402 aa5.07□□□□□ -1.6
HCFC2-204ENST00000550335 SEC24AO95486 1093 aa5.07□□□□□ -1.6
HCFC2-204ENST00000550335 F7P08709 466 aaPredicted RBP5.07□□□□□ -1.6
HCFC2-204ENST00000550335 FUT1P19526 365 aa5.07□□□□□ -1.6
HCFC2-204ENST00000550335 DNAJB1P25685 340 aa5.07□□□□□ -1.6
HCFC2-204ENST00000550335 CCND2P30279 289 aa5.07□□□□□ -1.6
HCFC2-204ENST00000550335 OR1D2P34982 312 aa5.07□□□□□ -1.6
HCFC2-204ENST00000550335 SOX3P41225 446 aa5.07□□□□□ -1.6
HCFC2-204ENST00000550335 ACADSBP45954 432 aa5.07□□□□□ -1.6
HCFC2-204ENST00000550335 LINC01547P58512 204 aaPredicted RBP5.07□□□□□ -1.6
HCFC2-204ENST00000550335 GPR50Q13585 617 aa5.07□□□□□ -1.6
HCFC2-204ENST00000550335 HNRNPDQ14103 355 aaKnown RBP5.07□□□□□ -1.6
HCFC2-204ENST00000550335 GRB14Q14449 540 aa5.07□□□□□ -1.6
HCFC2-204ENST00000550335 KRT81Q14533 505 aa5.07□□□□□ -1.6
HCFC2-204ENST00000550335 RBBP5Q15291 538 aaKnown RBP5.07□□□□□ -1.6
HCFC2-204ENST00000550335 TAF7Q15545 349 aaPredicted RBP5.07□□□□□ -1.6
HCFC2-204ENST00000550335 C3AR1Q16581 482 aa5.07□□□□□ -1.6
HCFC2-204ENST00000550335 WSCD2Q2TBF2 565 aa5.07□□□□□ -1.6
HCFC2-204ENST00000550335 ANKDD1AQ495B1 522 aa5.07□□□□□ -1.6
HCFC2-204ENST00000550335 FFAR4Q5NUL3 377 aa5.07□□□□□ -1.6
HCFC2-204ENST00000550335 ATP1A1-AS1Q5TC04 95 aa5.07□□□□□ -1.6
HCFC2-204ENST00000550335 HIST2H2AA3Q6FI13 130 aa5.07□□□□□ -1.6
HCFC2-204ENST00000550335 C19orf48Q6RUI8 117 aa5.07□□□□□ -1.6
HCFC2-204ENST00000550335 AFTPHQ6ULP2 937 aa5.07□□□□□ -1.6
HCFC2-204ENST00000550335 CEACAM20Q6UY09 585 aa5.07□□□□□ -1.6
HCFC2-204ENST00000550335 MCM10Q7L590 875 aa5.07□□□□□ -1.6
HCFC2-204ENST00000550335 OR56B1Q8NGI3 324 aa5.07□□□□□ -1.6
HCFC2-204ENST00000550335 PHYHIPQ92561 330 aa5.07□□□□□ -1.6
HCFC2-204ENST00000550335 RAB39BQ96DA2 213 aa5.07□□□□□ -1.6
HCFC2-204ENST00000550335 OMA1Q96E52 524 aa5.07□□□□□ -1.6
HCFC2-204ENST00000550335 C14orf79Q96F83 325 aa5.07□□□□□ -1.6
HCFC2-204ENST00000550335 C2orf48Q96LS8 159 aa5.07□□□□□ -1.6
HCFC2-204ENST00000550335 GPR137Q96N19 417 aa5.07□□□□□ -1.6
HCFC2-204ENST00000550335 SSX3Q99909 188 aa5.07□□□□□ -1.6
HCFC2-204ENST00000550335 SLC26A1Q9H2B4 701 aa5.07□□□□□ -1.6
HCFC2-204ENST00000550335 VIPAS39Q9H9C1 493 aa5.07□□□□□ -1.6
HCFC2-204ENST00000550335 UBE2TQ9NPD8 197 aaPredicted RBP5.07□□□□□ -1.6
HCFC2-204ENST00000550335 YAE1D1Q9NRH1 226 aa5.07□□□□□ -1.6
HCFC2-204ENST00000550335 SLC35D1Q9NTN3 355 aa5.07□□□□□ -1.6
HCFC2-204ENST00000550335 TMOD2Q9NZR1 351 aa5.07□□□□□ -1.6
HCFC2-204ENST00000550335 IL20RAQ9UHF4 553 aa5.07□□□□□ -1.6
HCFC2-204ENST00000550335 ATG4BQ9Y4P1 393 aa5.07□□□□□ -1.6
HCFC2-204ENST00000550335 FRMPD1Q5SYB0 1578 aa5.07□□□□□ -1.6
HCFC2-204ENST00000550335 PLEKHH2Q8IVE3 1493 aa5.07□□□□□ -1.6
HCFC2-204ENST00000550335 MLH3Q9UHC1 1453 aa5.07□□□□□ -1.6
HCFC2-204ENST00000550335 KIAA1107Q9UPP5 1409 aa5.06□□□□□ -1.6
HCFC2-204ENST00000550335 RICTORQ6R327 1708 aa5.06□□□□□ -1.6
HCFC2-204ENST00000550335 LRRIQ1Q96JM4 1722 aa5.06□□□□□ -1.6
HCFC2-204ENST00000550335 MYO5CQ9NQX4 1742 aa5.06□□□□□ -1.6
HCFC2-204ENST00000550335 MTUS2Q5JR59 1369 aa5.06□□□□□ -1.6
HCFC2-204ENST00000550335 DISP3Q9P2K9 1392 aa5.06□□□□□ -1.6
HCFC2-204ENST00000550335 ATP6AP2A0A1C7CYW4 349 aa5.06□□□□□ -1.6
HCFC2-204ENST00000550335 YJEFN3A6XGL0 299 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms