RNA–Protein interactions for RNA: ENST00000550220.1

VTI1BP3-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 3, humanhuman

BASIC

Gene VTI1BP3, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP3-201ENST00000550220 ESAMQ96AP7 390 aa10.14□□□□□ -0.79
VTI1BP3-201ENST00000550220 HES7Q9BYE0 225 aa10.14□□□□□ -0.79
VTI1BP3-201ENST00000550220 HPF1Q9NWY4 346 aa10.14□□□□□ -0.79
VTI1BP3-201ENST00000550220 PSD3Q9NYI0 1048 aa10.14□□□□□ -0.79
VTI1BP3-201ENST00000550220 KCMF1Q9P0J7 381 aa10.14□□□□□ -0.79
VTI1BP3-201ENST00000550220 MYOTQ9UBF9 498 aa10.14□□□□□ -0.79
VTI1BP3-201ENST00000550220 ERVK-11Q9UQG0 969 aa10.14□□□□□ -0.79
VTI1BP3-201ENST00000550220 MEMO1Q9Y316 297 aa10.14□□□□□ -0.79
VTI1BP3-201ENST00000550220 ANGPTL3Q9Y5C1 460 aa10.14□□□□□ -0.79
VTI1BP3-201ENST00000550220 PCDHGA11Q9Y5H2 935 aa10.14□□□□□ -0.79
VTI1BP3-201ENST00000550220 TEX15Q9BXT5 2789 aa10.13□□□□□ -0.79
VTI1BP3-201ENST00000550220 E9PLN8 166 aa10.13□□□□□ -0.79
VTI1BP3-201ENST00000550220 TFECO14948 347 aaPredicted RBP10.13□□□□□ -0.79
VTI1BP3-201ENST00000550220 PRAMEF4O60810 478 aa10.13□□□□□ -0.79
VTI1BP3-201ENST00000550220 TBX6O95947 436 aaPredicted RBP10.13□□□□□ -0.79
VTI1BP3-201ENST00000550220 TUBB4AP04350 444 aa10.13□□□□□ -0.79
VTI1BP3-201ENST00000550220 PCNAP12004 261 aa10.13□□□□□ -0.79
VTI1BP3-201ENST00000550220 HIST1H1TP22492 207 aaPredicted RBP10.13□□□□□ -0.79
VTI1BP3-201ENST00000550220 ATP5A1P25705 553 aaKnown RBP10.13□□□□□ -0.79
VTI1BP3-201ENST00000550220 PTX3P26022 381 aaPredicted RBP10.13□□□□□ -0.79
VTI1BP3-201ENST00000550220 CERS1P27544 350 aa10.13□□□□□ -0.79
VTI1BP3-201ENST00000550220 HTR1EP28566 365 aa10.13□□□□□ -0.79
VTI1BP3-201ENST00000550220 PTGER4P35408 488 aa10.13□□□□□ -0.79
VTI1BP3-201ENST00000550220 PIK3CGP48736 1102 aa10.13□□□□□ -0.79
VTI1BP3-201ENST00000550220 MEOX1P50221 254 aa10.13□□□□□ -0.79
VTI1BP3-201ENST00000550220 ALDH18A1P54886 795 aaKnown RBP10.13□□□□□ -0.79
VTI1BP3-201ENST00000550220 TBL3Q12788 808 aaKnown RBP10.13□□□□□ -0.79
VTI1BP3-201ENST00000550220 DEPDC1Q5TB30 811 aa10.13□□□□□ -0.79
VTI1BP3-201ENST00000550220 PRAMEF9Q5VWM5 478 aa10.13□□□□□ -0.79
VTI1BP3-201ENST00000550220 KHDRBS2Q5VWX1 349 aaKnown RBP10.13□□□□□ -0.79
VTI1BP3-201ENST00000550220 LIPJQ5W064 366 aa10.13□□□□□ -0.79
VTI1BP3-201ENST00000550220 GRHL2Q6ISB3 625 aa10.13□□□□□ -0.79
VTI1BP3-201ENST00000550220 C8orf74Q6P047 294 aa10.13□□□□□ -0.79
VTI1BP3-201ENST00000550220 ZDHHC24Q6UX98 284 aa10.13□□□□□ -0.79
VTI1BP3-201ENST00000550220 LURAP1LQ8IV03 231 aa10.13□□□□□ -0.79
VTI1BP3-201ENST00000550220 CPSF7Q8N684 471 aaKnown RBP10.13□□□□□ -0.79
VTI1BP3-201ENST00000550220 ZFP62Q8NB50 900 aaPredicted RBP10.13□□□□□ -0.79
VTI1BP3-201ENST00000550220 OR7G3Q8NG95 312 aa10.13□□□□□ -0.79
VTI1BP3-201ENST00000550220 ASB15Q8WXK1 588 aa10.13□□□□□ -0.79
VTI1BP3-201ENST00000550220 TANKQ92844 425 aa10.13□□□□□ -0.79
VTI1BP3-201ENST00000550220 EXT2Q93063 718 aa10.13□□□□□ -0.79
VTI1BP3-201ENST00000550220 RGMAQ96B86 450 aa10.13□□□□□ -0.79
VTI1BP3-201ENST00000550220 RBM18Q96H35 190 aaKnown RBP10.13□□□□□ -0.79
VTI1BP3-201ENST00000550220 ART5Q96L15 291 aa10.13□□□□□ -0.79
VTI1BP3-201ENST00000550220 SGCZQ96LD1 299 aa10.13□□□□□ -0.79
VTI1BP3-201ENST00000550220 ATOH8Q96SQ7 321 aa10.13□□□□□ -0.79
VTI1BP3-201ENST00000550220 VKORC1Q9BQB6 163 aa10.13□□□□□ -0.79
VTI1BP3-201ENST00000550220 MS4A8Q9BY19 250 aa10.13□□□□□ -0.79
VTI1BP3-201ENST00000550220 IGSF5Q9NSI5 407 aa10.13□□□□□ -0.79
VTI1BP3-201ENST00000550220 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.13□□□□□ -0.79
VTI1BP3-201ENST00000550220 COPS7AQ9UBW8 275 aa10.13□□□□□ -0.79
VTI1BP3-201ENST00000550220 MTRF1LQ9UGC7 380 aaKnown RBP10.13□□□□□ -0.79
VTI1BP3-201ENST00000550220 SH3BGRL2Q9UJC5 107 aa10.13□□□□□ -0.79
VTI1BP3-201ENST00000550220 TMCO1Q9UM00 188 aa10.13□□□□□ -0.79
VTI1BP3-201ENST00000550220 CLDN16Q9Y5I7 305 aa10.13□□□□□ -0.79
VTI1BP3-201ENST00000550220 CACNA1DQ01668 2161 aa10.13□□□□□ -0.79
VTI1BP3-201ENST00000550220 UTP20O75691 2785 aaKnown RBP10.12□□□□□ -0.79
VTI1BP3-201ENST00000550220 CENPEQ02224 2701 aa10.12□□□□□ -0.79
VTI1BP3-201ENST00000550220 ARHGAP10A1A4S6 786 aa10.12□□□□□ -0.79
VTI1BP3-201ENST00000550220 H0YIV9 168 aa10.12□□□□□ -0.79
VTI1BP3-201ENST00000550220 ACOT7O00154 380 aa10.12□□□□□ -0.79
VTI1BP3-201ENST00000550220 KLHL2O95198 593 aa10.12□□□□□ -0.79
VTI1BP3-201ENST00000550220 TGFB1P01137 390 aa10.12□□□□□ -0.79
VTI1BP3-201ENST00000550220 C2P06681 752 aa10.12□□□□□ -0.79
VTI1BP3-201ENST00000550220 GFAPP14136 432 aa10.12□□□□□ -0.79
VTI1BP3-201ENST00000550220 COX6B1P14854 86 aa10.12□□□□□ -0.79
VTI1BP3-201ENST00000550220 EPORP19235 508 aa10.12□□□□□ -0.79
VTI1BP3-201ENST00000550220 CD22P20273 847 aa10.12□□□□□ -0.79
VTI1BP3-201ENST00000550220 CPN2P22792 545 aa10.12□□□□□ -0.79
VTI1BP3-201ENST00000550220 TYK2P29597 1187 aa10.12□□□□□ -0.79
VTI1BP3-201ENST00000550220 PTGS2P35354 604 aa10.12□□□□□ -0.79
VTI1BP3-201ENST00000550220 SSR2P43308 183 aa10.12□□□□□ -0.79
VTI1BP3-201ENST00000550220 RAP1GDS1P52306 607 aa10.12□□□□□ -0.79
VTI1BP3-201ENST00000550220 PCBP2Q15366 365 aaKnown RBP eCLIP10.12□□□□□ -0.79
VTI1BP3-201ENST00000550220 FBXO48Q5FWF7 155 aa10.12□□□□□ -0.79
VTI1BP3-201ENST00000550220 C10orf62Q5T681 223 aaPredicted RBP10.12□□□□□ -0.79
VTI1BP3-201ENST00000550220 NDUFAF5Q5TEU4 345 aa10.12□□□□□ -0.79
VTI1BP3-201ENST00000550220 TMEM211Q6ICI0 200 aa10.12□□□□□ -0.79
VTI1BP3-201ENST00000550220 OR4C11Q6IEV9 310 aa10.12□□□□□ -0.79
VTI1BP3-201ENST00000550220 ARHGAP11AQ6P4F7 1023 aa10.12□□□□□ -0.79
VTI1BP3-201ENST00000550220 OPN5Q6U736 354 aa10.12□□□□□ -0.79
VTI1BP3-201ENST00000550220 UBE3DQ7Z6J8 389 aa10.12□□□□□ -0.79
VTI1BP3-201ENST00000550220 CLNKQ7Z7G1 428 aa10.12□□□□□ -0.79
VTI1BP3-201ENST00000550220 CMC1Q7Z7K0 106 aa10.12□□□□□ -0.79
VTI1BP3-201ENST00000550220 ZNF227Q86WZ6 799 aa10.12□□□□□ -0.79
VTI1BP3-201ENST00000550220 RELL1Q8IUW5 271 aa10.12□□□□□ -0.79
VTI1BP3-201ENST00000550220 ZCCHC7Q8N3Z6 543 aaKnown RBP10.12□□□□□ -0.79
VTI1BP3-201ENST00000550220 GOLM1Q8NBJ4 401 aa10.12□□□□□ -0.79
VTI1BP3-201ENST00000550220 PSD4Q8NDX1 1056 aa10.12□□□□□ -0.79
VTI1BP3-201ENST00000550220 PTPMT1Q8WUK0 201 aaPredicted RBP10.12□□□□□ -0.79
VTI1BP3-201ENST00000550220 NXNL1Q96CM4 212 aa10.12□□□□□ -0.79
VTI1BP3-201ENST00000550220 PELOQ9BRX2 385 aaKnown RBP10.12□□□□□ -0.79
VTI1BP3-201ENST00000550220 TSPAN10Q9H1Z9 355 aaPredicted RBP10.12□□□□□ -0.79
VTI1BP3-201ENST00000550220 ACTR8Q9H981 624 aa10.12□□□□□ -0.79
VTI1BP3-201ENST00000550220 PHF11Q9UIL8 331 aa10.12□□□□□ -0.79
VTI1BP3-201ENST00000550220 TINAGQ9UJW2 476 aa10.12□□□□□ -0.79
VTI1BP3-201ENST00000550220 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.12□□□□□ -0.79
VTI1BP3-201ENST00000550220 MYO9AB2RTY4 2548 aa10.12□□□□□ -0.79
VTI1BP3-201ENST00000550220 CPAMD8Q8IZJ3 1885 aa10.11□□□□□ -0.79
VTI1BP3-201ENST00000550220 A0A096LPK6 155 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms