RNA–Protein interactions for RNA: ENST00000550219.1

NUP188-211, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 886 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-211ENST00000550219 MFSD9Q8NBP5 474 aa12.6□□□□□ -0.39
NUP188-211ENST00000550219 ABHD11Q8NFV4 315 aa12.6□□□□□ -0.39
NUP188-211ENST00000550219 CKAP2Q8WWK9 683 aa12.6□□□□□ -0.39
NUP188-211ENST00000550219 MARVELD3Q96A59 401 aa12.6□□□□□ -0.39
NUP188-211ENST00000550219 WDR34Q96EX3 536 aa12.6□□□□□ -0.39
NUP188-211ENST00000550219 ZNF354BQ96LW1 612 aa12.6□□□□□ -0.39
NUP188-211ENST00000550219 HES7Q9BYE0 225 aa12.6□□□□□ -0.39
NUP188-211ENST00000550219 KLHL1Q9NR64 748 aa12.6□□□□□ -0.39
NUP188-211ENST00000550219 SUCOQ9UBS9 1254 aaKnown RBP12.6□□□□□ -0.39
NUP188-211ENST00000550219 TMEM114B3SHH9 223 aa12.59□□□□□ -0.39
NUP188-211ENST00000550219 OR7A17O14581 309 aa12.59□□□□□ -0.39
NUP188-211ENST00000550219 MLYCDO95822 493 aa12.59□□□□□ -0.39
NUP188-211ENST00000550219 CYC1P08574 325 aa12.59□□□□□ -0.39
NUP188-211ENST00000550219 GNAZP19086 355 aa12.59□□□□□ -0.39
NUP188-211ENST00000550219 BGNP21810 368 aa12.59□□□□□ -0.39
NUP188-211ENST00000550219 ARRB2P32121 409 aa12.59□□□□□ -0.39
NUP188-211ENST00000550219 OC90Q02509 493 aaPredicted RBP12.59□□□□□ -0.39
NUP188-211ENST00000550219 RBPJQ06330 500 aa12.59□□□□□ -0.39
NUP188-211ENST00000550219 LCP2Q13094 533 aa12.59□□□□□ -0.39
NUP188-211ENST00000550219 RCN2Q14257 317 aa12.59□□□□□ -0.39
NUP188-211ENST00000550219 NSDHLQ15738 373 aa12.59□□□□□ -0.39
NUP188-211ENST00000550219 TBCCQ15814 346 aa12.59□□□□□ -0.39
NUP188-211ENST00000550219 EXT1Q16394 746 aa12.59□□□□□ -0.39
NUP188-211ENST00000550219 DEFB134Q4QY38 66 aa12.59□□□□□ -0.39
NUP188-211ENST00000550219 CFAP157Q5JU67 520 aa12.59□□□□□ -0.39
NUP188-211ENST00000550219 ACER2Q5QJU3 275 aa12.59□□□□□ -0.39
NUP188-211ENST00000550219 CATSPEREQ5SY80 951 aa12.59□□□□□ -0.39
NUP188-211ENST00000550219 SLCO4C1Q6ZQN7 724 aa12.59□□□□□ -0.39
NUP188-211ENST00000550219 RGS9BPQ6ZS82 235 aa12.59□□□□□ -0.39
NUP188-211ENST00000550219 ZCCHC23Q6ZST2 131 aa12.59□□□□□ -0.39
NUP188-211ENST00000550219 RPS27LQ71UM5 84 aaKnown RBP12.59□□□□□ -0.39
NUP188-211ENST00000550219 TMPRSS11BQ86T26 416 aa12.59□□□□□ -0.39
NUP188-211ENST00000550219 CCNYL1Q8N7R7 359 aa12.59□□□□□ -0.39
NUP188-211ENST00000550219 SNX31Q8N9S9 440 aa12.59□□□□□ -0.39
NUP188-211ENST00000550219 ZNF740Q8NDX6 193 aa12.59□□□□□ -0.39
NUP188-211ENST00000550219 OR4K1Q8NGD4 311 aa12.59□□□□□ -0.39
NUP188-211ENST00000550219 SLC5A11Q8WWX8 675 aa12.59□□□□□ -0.39
NUP188-211ENST00000550219 ZNF75CPQ92670 426 aaPredicted RBP12.59□□□□□ -0.39
NUP188-211ENST00000550219 NEIL2Q969S2 332 aa12.59□□□□□ -0.39
NUP188-211ENST00000550219 TM4SF19Q96DZ7 209 aa12.59□□□□□ -0.39
NUP188-211ENST00000550219 SIGLEC12Q96PQ1 595 aa12.59□□□□□ -0.39
NUP188-211ENST00000550219 ZNF382Q96SR6 550 aa12.59□□□□□ -0.39
NUP188-211ENST00000550219 LPAR4Q99677 370 aa12.59□□□□□ -0.39
NUP188-211ENST00000550219 NTMT1Q9BV86 223 aa12.59□□□□□ -0.39
NUP188-211ENST00000550219 TSPAN10Q9H1Z9 355 aaPredicted RBP12.59□□□□□ -0.39
NUP188-211ENST00000550219 SPNS1Q9H2V7 528 aa12.59□□□□□ -0.39
NUP188-211ENST00000550219 EHD1Q9H4M9 534 aa12.59□□□□□ -0.39
NUP188-211ENST00000550219 NOL11Q9H8H0 719 aaKnown RBP12.59□□□□□ -0.39
NUP188-211ENST00000550219 MANSC1Q9H8J5 431 aa12.59□□□□□ -0.39
NUP188-211ENST00000550219 ZNF225Q9UK10 706 aa12.59□□□□□ -0.39
NUP188-211ENST00000550219 CCL21O00585 134 aa12.58□□□□□ -0.4
NUP188-211ENST00000550219 PPP6CO00743 305 aa12.58□□□□□ -0.4
NUP188-211ENST00000550219 UBFD1O14562 309 aaKnown RBP12.58□□□□□ -0.4
NUP188-211ENST00000550219 HNRNPRO43390 633 aaKnown RBP12.58□□□□□ -0.4
NUP188-211ENST00000550219 MAN1A2O60476 641 aa12.58□□□□□ -0.4
NUP188-211ENST00000550219 UGDHO60701 494 aa12.58□□□□□ -0.4
NUP188-211ENST00000550219 B4GALT2O60909 372 aa12.58□□□□□ -0.4
NUP188-211ENST00000550219 SNNO75324 88 aaPredicted RBP12.58□□□□□ -0.4
NUP188-211ENST00000550219 SNUPNO95149 360 aaKnown RBP12.58□□□□□ -0.4
NUP188-211ENST00000550219 ZNF888P0CJ79 500 aaPredicted RBP12.58□□□□□ -0.4
NUP188-211ENST00000550219 MDH1P40925 334 aaKnown RBP12.58□□□□□ -0.4
NUP188-211ENST00000550219 HNF4AP41235 474 aa12.58□□□□□ -0.4
NUP188-211ENST00000550219 OR4D2P58180 307 aa12.58□□□□□ -0.4
NUP188-211ENST00000550219 TAS2R50P59544 299 aa12.58□□□□□ -0.4
NUP188-211ENST00000550219 RHAGQ02094 409 aa12.58□□□□□ -0.4
NUP188-211ENST00000550219 RGS1Q08116 209 aa12.58□□□□□ -0.4
NUP188-211ENST00000550219 BST1Q10588 318 aa12.58□□□□□ -0.4
NUP188-211ENST00000550219 TRAF3Q13114 568 aa12.58□□□□□ -0.4
NUP188-211ENST00000550219 STX3Q13277 289 aa12.58□□□□□ -0.4
NUP188-211ENST00000550219 TUBA3CQ13748 450 aa12.58□□□□□ -0.4
NUP188-211ENST00000550219 HERC3Q15034 1050 aa12.58□□□□□ -0.4
NUP188-211ENST00000550219 OR1C1Q15619 314 aa12.58□□□□□ -0.4
NUP188-211ENST00000550219 MEP1AQ16819 746 aa12.58□□□□□ -0.4
NUP188-211ENST00000550219 ARL13AQ5H913 290 aaPredicted RBP12.58□□□□□ -0.4
NUP188-211ENST00000550219 ATG16L1Q676U5 607 aa12.58□□□□□ -0.4
NUP188-211ENST00000550219 TUBA3EQ6PEY2 450 aa12.58□□□□□ -0.4
NUP188-211ENST00000550219 NXPE4Q6UWF7 544 aa12.58□□□□□ -0.4
NUP188-211ENST00000550219 TBC1D19Q8N5T2 526 aa12.58□□□□□ -0.4
NUP188-211ENST00000550219 L3MBTL4Q8NA19 623 aa12.58□□□□□ -0.4
NUP188-211ENST00000550219 OR52B6Q8NGF0 335 aa12.58□□□□□ -0.4
NUP188-211ENST00000550219 DNAJB8Q8NHS0 232 aa12.58□□□□□ -0.4
NUP188-211ENST00000550219 PPP1R14CQ8TAE6 165 aa12.58□□□□□ -0.4
NUP188-211ENST00000550219 TRPC4APQ8TEL6 797 aa12.58□□□□□ -0.4
NUP188-211ENST00000550219 CCDC120Q96HB5 630 aa12.58□□□□□ -0.4
NUP188-211ENST00000550219 MAGEB18Q96M61 343 aa12.58□□□□□ -0.4
NUP188-211ENST00000550219 UTP23Q9BRU9 249 aaKnown RBP12.58□□□□□ -0.4
NUP188-211ENST00000550219 CCDC134Q9H6E4 229 aa12.58□□□□□ -0.4
NUP188-211ENST00000550219 IPPKQ9H8X2 491 aa12.58□□□□□ -0.4
NUP188-211ENST00000550219 PELI2Q9HAT8 420 aa12.58□□□□□ -0.4
NUP188-211ENST00000550219 SEMA4BQ9NPR2 832 aaPredicted RBP12.58□□□□□ -0.4
NUP188-211ENST00000550219 LANCL2Q9NS86 450 aa12.58□□□□□ -0.4
NUP188-211ENST00000550219 HAO1Q9UJM8 370 aa12.58□□□□□ -0.4
NUP188-211ENST00000550219 STK38LQ9Y2H1 464 aa12.58□□□□□ -0.4
NUP188-211ENST00000550219 DYRK1BQ9Y463 629 aa12.58□□□□□ -0.4
NUP188-211ENST00000550219 ANGPTL3Q9Y5C1 460 aa12.58□□□□□ -0.4
NUP188-211ENST00000550219 SLC22A7Q9Y694 548 aa12.58□□□□□ -0.4
NUP188-211ENST00000550219 PRRC2CQ9Y520 2896 aaKnown RBP12.57□□□□□ -0.4
NUP188-211ENST00000550219 TEX15Q9BXT5 2789 aa12.57□□□□□ -0.4
NUP188-211ENST00000550219 A0A1B0GTL3 188 aa12.57□□□□□ -0.4
NUP188-211ENST00000550219 TRBC2A0A5B9 178 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms