RNA–Protein interactions for RNA: ENST00000549612.5

ATF1-202, Transcript of activating transcription factor 1, humanhuman

TSL 5

Gene ATF1, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1-202ENST00000549612 MAGED4Q96JG8 741 aa18.19■□□□□ 0.5
ATF1-202ENST00000549612 GPR78Q96P69 363 aa18.19■□□□□ 0.5
ATF1-202ENST00000549612 MAPKAP1Q9BPZ7 522 aa18.19■□□□□ 0.5
ATF1-202ENST00000549612 CCDC77Q9BR77 488 aa18.19■□□□□ 0.5
ATF1-202ENST00000549612 ALOXE3Q9BYJ1 711 aa18.19■□□□□ 0.5
ATF1-202ENST00000549612 TSPAN10Q9H1Z9 355 aaPredicted RBP18.19■□□□□ 0.5
ATF1-202ENST00000549612 VTI1BQ9UEU0 232 aa18.19■□□□□ 0.5
ATF1-202ENST00000549612 NPIPA1Q9UND3 350 aa18.19■□□□□ 0.5
ATF1-202ENST00000549612 KLF13Q9Y2Y9 288 aaPredicted RBP18.19■□□□□ 0.5
ATF1-202ENST00000549612 RTCAO00442 366 aaKnown RBP18.18■□□□□ 0.5
ATF1-202ENST00000549612 PRKNO60260 465 aaPredicted RBP18.18■□□□□ 0.5
ATF1-202ENST00000549612 ZFAND5O76080 213 aa18.18■□□□□ 0.5
ATF1-202ENST00000549612 TGFB1P01137 390 aa18.18■□□□□ 0.5
ATF1-202ENST00000549612 IFNA16P05015 189 aa18.18■□□□□ 0.5
ATF1-202ENST00000549612 ZNF24P17028 368 aa18.18■□□□□ 0.5
ATF1-202ENST00000549612 PIK3CBP42338 1070 aa18.18■□□□□ 0.5
ATF1-202ENST00000549612 SERTAD2Q14140 314 aa18.18■□□□□ 0.5
ATF1-202ENST00000549612 UAP1Q16222 522 aaPredicted RBP18.18■□□□□ 0.5
ATF1-202ENST00000549612 C3AR1Q16581 482 aa18.18■□□□□ 0.5
ATF1-202ENST00000549612 AP5B1Q2VPB7 878 aa18.18■□□□□ 0.5
ATF1-202ENST00000549612 RNFT1Q5M7Z0 435 aa18.18■□□□□ 0.5
ATF1-202ENST00000549612 DEPDC1Q5TB30 811 aa18.18■□□□□ 0.5
ATF1-202ENST00000549612 RPTNQ6XPR3 784 aa18.18■□□□□ 0.5
ATF1-202ENST00000549612 CYP4Z2PQ8N1L4 340 aa18.18■□□□□ 0.5
ATF1-202ENST00000549612 MMGT1Q8N4V1 131 aa18.18■□□□□ 0.5
ATF1-202ENST00000549612 CPSF7Q8N684 471 aaKnown RBP18.18■□□□□ 0.5
ATF1-202ENST00000549612 POGLUT1Q8NBL1 392 aa18.18■□□□□ 0.5
ATF1-202ENST00000549612 MORN4Q8NDC4 146 aa18.18■□□□□ 0.5
ATF1-202ENST00000549612 OR14A16Q8NHC5 309 aa18.18■□□□□ 0.5
ATF1-202ENST00000549612 PTPMT1Q8WUK0 201 aaPredicted RBP18.18■□□□□ 0.5
ATF1-202ENST00000549612 MTRF1LQ9UGC7 380 aaKnown RBP18.18■□□□□ 0.5
ATF1-202ENST00000549612 ENTPD4Q9Y227 616 aa18.18■□□□□ 0.5
ATF1-202ENST00000549612 YARS2Q9Y2Z4 477 aaKnown RBP18.18■□□□□ 0.5
ATF1-202ENST00000549612 CLCA3PQ9Y6N3 262 aa18.18■□□□□ 0.5
ATF1-202ENST00000549612 SPACA6W5XKT8 324 aa18.18■□□□□ 0.5
ATF1-202ENST00000549612 MYO9AB2RTY4 2548 aa18.17■□□□□ 0.5
ATF1-202ENST00000549612 TMEM200CA6NKL6 621 aa18.17■□□□□ 0.5
ATF1-202ENST00000549612 ASNA1O43681 348 aa18.17■□□□□ 0.5
ATF1-202ENST00000549612 UGDHO60701 494 aa18.17■□□□□ 0.5
ATF1-202ENST00000549612 GFAPP14136 432 aa18.17■□□□□ 0.5
ATF1-202ENST00000549612 TYK2P29597 1187 aa18.17■□□□□ 0.5
ATF1-202ENST00000549612 SSR2P43308 183 aa18.17■□□□□ 0.5
ATF1-202ENST00000549612 SSR4P51571 173 aa18.17■□□□□ 0.5
ATF1-202ENST00000549612 STX4Q12846 297 aa18.17■□□□□ 0.5
ATF1-202ENST00000549612 ART3Q13508 389 aa18.17■□□□□ 0.5
ATF1-202ENST00000549612 PCBP2Q15366 365 aaKnown RBP eCLIP18.17■□□□□ 0.5
ATF1-202ENST00000549612 PFKFB4Q16877 469 aa18.17■□□□□ 0.5
ATF1-202ENST00000549612 LIPJQ5W064 366 aa18.17■□□□□ 0.5
ATF1-202ENST00000549612 METTL2BQ6P1Q9 378 aaKnown RBP18.17■□□□□ 0.5
ATF1-202ENST00000549612 KLC3Q6P597 504 aa18.17■□□□□ 0.5
ATF1-202ENST00000549612 SPPL2CQ8IUH8 684 aa18.17■□□□□ 0.5
ATF1-202ENST00000549612 GHDCQ8N2G8 530 aa18.17■□□□□ 0.5
ATF1-202ENST00000549612 ZNF808Q8N4W9 903 aaPredicted RBP18.17■□□□□ 0.5
ATF1-202ENST00000549612 TMEM156Q8N614 296 aa18.17■□□□□ 0.5
ATF1-202ENST00000549612 HUS1BQ8NHY5 278 aa18.17■□□□□ 0.5
ATF1-202ENST00000549612 ISL2Q96A47 359 aa18.17■□□□□ 0.5
ATF1-202ENST00000549612 TSPYL1Q9H0U9 437 aa18.17■□□□□ 0.5
ATF1-202ENST00000549612 OR51B5Q9H339 312 aa18.17■□□□□ 0.5
ATF1-202ENST00000549612 DMRT3Q9NQL9 472 aa18.17■□□□□ 0.5
ATF1-202ENST00000549612 DMGDHQ9UI17 866 aaKnown RBP18.17■□□□□ 0.5
ATF1-202ENST00000549612 SH3BGRL2Q9UJC5 107 aa18.17■□□□□ 0.5
ATF1-202ENST00000549612 TINAGQ9UJW2 476 aa18.17■□□□□ 0.5
ATF1-202ENST00000549612 ANGPTL3Q9Y5C1 460 aa18.17■□□□□ 0.5
ATF1-202ENST00000549612 LRBAP50851 2863 aa18.17■□□□□ 0.5
ATF1-202ENST00000549612 CACNA1DQ01668 2161 aa18.16■□□□□ 0.5
ATF1-202ENST00000549612 H0YIV9 168 aa18.16■□□□□ 0.5
ATF1-202ENST00000549612 LDB3O75112 727 aa18.16■□□□□ 0.5
ATF1-202ENST00000549612 SH3BGRLO75368 114 aa18.16■□□□□ 0.5
ATF1-202ENST00000549612 MAGEA12P43365 314 aa18.16■□□□□ 0.5
ATF1-202ENST00000549612 ARFIP1P53367 373 aa18.16■□□□□ 0.5
ATF1-202ENST00000549612 IGLV3-21P80748 117 aaPredicted RBP18.16■□□□□ 0.5
ATF1-202ENST00000549612 DDX39BQ13838 428 aaKnown RBP18.16■□□□□ 0.5
ATF1-202ENST00000549612 OR4C11Q6IEV9 310 aa18.16■□□□□ 0.5
ATF1-202ENST00000549612 HSDL2Q6YN16 418 aa18.16■□□□□ 0.5
ATF1-202ENST00000549612 SULF2Q8IWU5 870 aa18.16■□□□□ 0.5
ATF1-202ENST00000549612 CHERPQ8IWX8 916 aaKnown RBP18.16■□□□□ 0.5
ATF1-202ENST00000549612 GPALPP1Q8IXQ4 340 aa18.16■□□□□ 0.5
ATF1-202ENST00000549612 NOA1Q8NC60 698 aaKnown RBP18.16■□□□□ 0.5
ATF1-202ENST00000549612 C7orf57Q8NEG2 295 aa18.16■□□□□ 0.5
ATF1-202ENST00000549612 SLC44A1Q8WWI5 657 aa18.16■□□□□ 0.5
ATF1-202ENST00000549612 RGMAQ96B86 450 aa18.16■□□□□ 0.5
ATF1-202ENST00000549612 ANKRD9Q96BM1 317 aaPredicted RBP18.16■□□□□ 0.5
ATF1-202ENST00000549612 CDC42EP4Q9H3Q1 356 aaKnown RBP18.16■□□□□ 0.5
ATF1-202ENST00000549612 ACTR8Q9H981 624 aa18.16■□□□□ 0.5
ATF1-202ENST00000549612 PRM3Q9NNZ6 103 aa18.16■□□□□ 0.5
ATF1-202ENST00000549612 MYOTQ9UBF9 498 aa18.16■□□□□ 0.5
ATF1-202ENST00000549612 PCDHGA11Q9Y5H2 935 aa18.16■□□□□ 0.5
ATF1-202ENST00000549612 TNPO3Q9Y5L0 923 aaKnown RBP18.16■□□□□ 0.5
ATF1-202ENST00000549612 KLF2Q9Y5W3 355 aaPredicted RBP18.16■□□□□ 0.5
ATF1-202ENST00000549612 MYOCOSA0A1B0GUC4 107 aa18.15■□□□□ 0.5
ATF1-202ENST00000549612 LRRC14BA6NHZ5 514 aa18.15■□□□□ 0.5
ATF1-202ENST00000549612 PRSS44E7EML9 344 aa18.15■□□□□ 0.5
ATF1-202ENST00000549612 KLRC4-KLRK1H3BQV0 150 aa18.15■□□□□ 0.5
ATF1-202ENST00000549612 SAP18O00422 153 aaKnown RBP18.15■□□□□ 0.5
ATF1-202ENST00000549612 PEX1O43933 1283 aa18.15■□□□□ 0.5
ATF1-202ENST00000549612 OR2J2O76002 312 aa18.15■□□□□ 0.5
ATF1-202ENST00000549612 CPN2P22792 545 aa18.15■□□□□ 0.5
ATF1-202ENST00000549612 PIK3CGP48736 1102 aa18.15■□□□□ 0.5
ATF1-202ENST00000549612 MEOX1P50221 254 aa18.15■□□□□ 0.5
ATF1-202ENST00000549612 RAP1GDS1P52306 607 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms