RNA–Protein interactions for RNA: ENST00000548938.5

HDAC7-228, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 2,719 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-228ENST00000548938 GBAP04062 536 aa13.11□□□□□ -0.31
HDAC7-228ENST00000548938 ITGB7P26010 798 aa13.11□□□□□ -0.31
HDAC7-228ENST00000548938 HMGA2P52926 109 aa13.11□□□□□ -0.31
HDAC7-228ENST00000548938 EEF1A2Q05639 463 aaKnown RBP13.11□□□□□ -0.31
HDAC7-228ENST00000548938 DUSP7Q16829 419 aa13.11□□□□□ -0.31
HDAC7-228ENST00000548938 CEP78Q5JTW2 689 aa13.11□□□□□ -0.31
HDAC7-228ENST00000548938 PDZK1Q5T2W1 519 aa13.11□□□□□ -0.31
HDAC7-228ENST00000548938 SAXO2Q658L1 398 aa13.11□□□□□ -0.31
HDAC7-228ENST00000548938 SYCE2Q6PIF2 218 aa13.11□□□□□ -0.31
HDAC7-228ENST00000548938 TRIM69Q86WT6 500 aa13.11□□□□□ -0.31
HDAC7-228ENST00000548938 DCAF4L2Q8NA75 395 aa13.11□□□□□ -0.31
HDAC7-228ENST00000548938 TP53I13Q8NBR0 393 aaPredicted RBP13.11□□□□□ -0.31
HDAC7-228ENST00000548938 GALNT6Q8NCL4 622 aa13.11□□□□□ -0.31
HDAC7-228ENST00000548938 OR52N2Q8NGI0 321 aa13.11□□□□□ -0.31
HDAC7-228ENST00000548938 FOXJ1Q92949 421 aa13.11□□□□□ -0.31
HDAC7-228ENST00000548938 SLC25A46Q96AG3 418 aa13.11□□□□□ -0.31
HDAC7-228ENST00000548938 REPS1Q96D71 796 aa13.11□□□□□ -0.31
HDAC7-228ENST00000548938 ASIC4Q96FT7 647 aa13.11□□□□□ -0.31
HDAC7-228ENST00000548938 MED8Q96G25 268 aa13.11□□□□□ -0.31
HDAC7-228ENST00000548938 TMEM80Q96HE8 168 aa13.11□□□□□ -0.31
HDAC7-228ENST00000548938 DIRAS2Q96HU8 199 aa13.11□□□□□ -0.31
HDAC7-228ENST00000548938 PKP4Q99569 1192 aa13.11□□□□□ -0.31
HDAC7-228ENST00000548938 FZD3Q9NPG1 666 aa13.11□□□□□ -0.31
HDAC7-228ENST00000548938 ENOPH1Q9UHY7 261 aa13.11□□□□□ -0.31
HDAC7-228ENST00000548938 TMPRSS11EQ9UL52 423 aa13.11□□□□□ -0.31
HDAC7-228ENST00000548938 PCDHB7Q9Y5E2 793 aa13.11□□□□□ -0.31
HDAC7-228ENST00000548938 SNX11Q9Y5W9 270 aa13.11□□□□□ -0.31
HDAC7-228ENST00000548938 PLXNB3Q9ULL4 1909 aa13.11□□□□□ -0.31
HDAC7-228ENST00000548938 TRBV4-1A0A0J9YWV2 114 aa13.11□□□□□ -0.31
HDAC7-228ENST00000548938 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.11□□□□□ -0.31
HDAC7-228ENST00000548938 PITPNM1O00562 1244 aa13.11□□□□□ -0.31
HDAC7-228ENST00000548938 PLA2G10O15496 165 aa13.11□□□□□ -0.31
HDAC7-228ENST00000548938 RPL17P18621 184 aaKnown RBP13.11□□□□□ -0.31
HDAC7-228ENST00000548938 AP1S2P56377 157 aa13.11□□□□□ -0.31
HDAC7-228ENST00000548938 ZNF91Q05481 1191 aa13.11□□□□□ -0.31
HDAC7-228ENST00000548938 FCHO2Q0JRZ9 810 aa13.11□□□□□ -0.31
HDAC7-228ENST00000548938 LRRC73Q5JTD7 316 aa13.11□□□□□ -0.31
HDAC7-228ENST00000548938 FUT10Q6P4F1 479 aa13.11□□□□□ -0.31
HDAC7-228ENST00000548938 GLCCI1Q86VQ1 547 aa13.11□□□□□ -0.31
HDAC7-228ENST00000548938 TMEM173Q86WV6 379 aaPredicted RBP13.11□□□□□ -0.31
HDAC7-228ENST00000548938 PHC2Q8IXK0 858 aa13.11□□□□□ -0.31
HDAC7-228ENST00000548938 GPR65Q8IYL9 337 aa13.11□□□□□ -0.31
HDAC7-228ENST00000548938 OR9Q1Q8NGQ5 310 aa13.11□□□□□ -0.31
HDAC7-228ENST00000548938 CREB3L4Q8TEY5 395 aa13.11□□□□□ -0.31
HDAC7-228ENST00000548938 TMEM203Q969S6 136 aa13.11□□□□□ -0.31
HDAC7-228ENST00000548938 SAMD11Q96NU1 681 aa13.11□□□□□ -0.31
HDAC7-228ENST00000548938 CASD1Q96PB1 797 aa13.11□□□□□ -0.31
HDAC7-228ENST00000548938 CITED4Q96RK1 184 aa13.11□□□□□ -0.31
HDAC7-228ENST00000548938 MND1Q9BWT6 205 aa13.11□□□□□ -0.31
HDAC7-228ENST00000548938 ELAC1Q9H777 363 aaKnown RBP13.11□□□□□ -0.31
HDAC7-228ENST00000548938 C1GALT1Q9NS00 363 aa13.11□□□□□ -0.31
HDAC7-228ENST00000548938 SSR3Q9UNL2 185 aa13.11□□□□□ -0.31
HDAC7-228ENST00000548938 DSPPQ9NZW4 1301 aa13.1□□□□□ -0.31
HDAC7-228ENST00000548938 UGDHO60701 494 aa13.1□□□□□ -0.31
HDAC7-228ENST00000548938 AP2A2O94973 939 aa13.1□□□□□ -0.31
HDAC7-228ENST00000548938 CRYZL1O95825 349 aa13.1□□□□□ -0.31
HDAC7-228ENST00000548938 MSL3P1P0C860 447 aa13.1□□□□□ -0.31
HDAC7-228ENST00000548938 MPC1LP0DKB6 136 aa13.1□□□□□ -0.31
HDAC7-228ENST00000548938 LHCGRP22888 699 aa13.1□□□□□ -0.31
HDAC7-228ENST00000548938 TIA1P31483 386 aaKnown RBP eCLIP13.1□□□□□ -0.31
HDAC7-228ENST00000548938 GPC1P35052 558 aa13.1□□□□□ -0.31
HDAC7-228ENST00000548938 ATN1P54259 1190 aaPredicted RBP13.1□□□□□ -0.31
HDAC7-228ENST00000548938 MC1RQ01726 317 aa13.1□□□□□ -0.31
HDAC7-228ENST00000548938 SP140Q13342 867 aa13.1□□□□□ -0.31
HDAC7-228ENST00000548938 PYDC2Q56P42 97 aa13.1□□□□□ -0.31
HDAC7-228ENST00000548938 XKRXQ6PP77 449 aa13.1□□□□□ -0.31
HDAC7-228ENST00000548938 YIPF7Q8N8F6 280 aa13.1□□□□□ -0.31
HDAC7-228ENST00000548938 BTN2A2Q8WVV5 523 aa13.1□□□□□ -0.31
HDAC7-228ENST00000548938 SCLYQ96I15 445 aa13.1□□□□□ -0.31
HDAC7-228ENST00000548938 MAGEB10Q96LZ2 347 aaPredicted RBP13.1□□□□□ -0.31
HDAC7-228ENST00000548938 OR4K3Q96R72 315 aa13.1□□□□□ -0.31
HDAC7-228ENST00000548938 KLF16Q9BXK1 252 aaPredicted RBP13.1□□□□□ -0.31
HDAC7-228ENST00000548938 TXNL4BQ9NX01 149 aaKnown RBP13.1□□□□□ -0.31
HDAC7-228ENST00000548938 PLEKHB1Q9UF11 243 aaPredicted RBP13.1□□□□□ -0.31
HDAC7-228ENST00000548938 CD84Q9UIB8 345 aa13.1□□□□□ -0.31
HDAC7-228ENST00000548938 IGLV3-16A0A075B6K0 115 aa13.1□□□□□ -0.31
HDAC7-228ENST00000548938 FFAR1O14842 300 aa13.1□□□□□ -0.31
HDAC7-228ENST00000548938 BNIP3LO60238 219 aa13.1□□□□□ -0.31
HDAC7-228ENST00000548938 ZNF780AO75290 641 aaPredicted RBP13.1□□□□□ -0.31
HDAC7-228ENST00000548938 TSPAN19P0C672 248 aa13.1□□□□□ -0.31
HDAC7-228ENST00000548938 CCNYL3P0C7X3 344 aa13.1□□□□□ -0.31
HDAC7-228ENST00000548938 ZNF8P17098 575 aaPredicted RBP13.1□□□□□ -0.31
HDAC7-228ENST00000548938 NAE1Q13564 534 aa13.1□□□□□ -0.31
HDAC7-228ENST00000548938 QPRTQ15274 297 aa13.1□□□□□ -0.31
HDAC7-228ENST00000548938 SLC5A12Q1EHB4 618 aa13.1□□□□□ -0.31
HDAC7-228ENST00000548938 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.1□□□□□ -0.31
HDAC7-228ENST00000548938 SIGIRRQ6IA17 410 aa13.1□□□□□ -0.31
HDAC7-228ENST00000548938 C22orf42Q6IC83 251 aa13.1□□□□□ -0.31
HDAC7-228ENST00000548938 OTOP2Q7RTS6 562 aa13.1□□□□□ -0.31
HDAC7-228ENST00000548938 NLGN4YQ8NFZ3 816 aaPredicted RBP13.1□□□□□ -0.31
HDAC7-228ENST00000548938 HUS1BQ8NHY5 278 aa13.1□□□□□ -0.31
HDAC7-228ENST00000548938 ENKURQ8TC29 256 aa13.1□□□□□ -0.31
HDAC7-228ENST00000548938 ZFAND1Q8TCF1 268 aa13.1□□□□□ -0.31
HDAC7-228ENST00000548938 HCAR2Q8TDS4 363 aa13.1□□□□□ -0.31
HDAC7-228ENST00000548938 CLIP3Q96DZ5 547 aa13.1□□□□□ -0.31
HDAC7-228ENST00000548938 C19orf43Q9BQ61 176 aa13.1□□□□□ -0.31
HDAC7-228ENST00000548938 RNF208Q9H0X6 261 aa13.1□□□□□ -0.31
HDAC7-228ENST00000548938 REV1Q9UBZ9 1251 aa13.1□□□□□ -0.31
HDAC7-228ENST00000548938 YARS2Q9Y2Z4 477 aaKnown RBP13.1□□□□□ -0.31
HDAC7-228ENST00000548938 ARHGEF33A8MVX0 844 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms