RNA–Protein interactions for RNA: ENST00000548786.1

DDX54-205, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-205ENST00000548786 NR6A1Q15406 480 aa14.76□□□□□ -0.05
DDX54-205ENST00000548786 LETMD1Q6P1Q0 360 aa14.76□□□□□ -0.05
DDX54-205ENST00000548786 METTL2BQ6P1Q9 378 aaKnown RBP14.76□□□□□ -0.05
DDX54-205ENST00000548786 OR4N5Q8IXE1 308 aa14.76□□□□□ -0.05
DDX54-205ENST00000548786 ZNF595Q8IYB9 648 aa14.76□□□□□ -0.05
DDX54-205ENST00000548786 ACMSDQ8TDX5 336 aa14.76□□□□□ -0.05
DDX54-205ENST00000548786 HBEGFQ99075 208 aa14.76□□□□□ -0.05
DDX54-205ENST00000548786 ERVK-6Q9BXR3 956 aa14.76□□□□□ -0.05
DDX54-205ENST00000548786 CDCP1Q9H5V8 836 aa14.76□□□□□ -0.05
DDX54-205ENST00000548786 LYRM4Q9HD34 91 aa14.76□□□□□ -0.05
DDX54-205ENST00000548786 EMCNQ9ULC0 261 aa14.76□□□□□ -0.05
DDX54-205ENST00000548786 CLDN16Q9Y5I7 305 aa14.76□□□□□ -0.05
DDX54-205ENST00000548786 SPACA6W5XKT8 324 aa14.76□□□□□ -0.05
DDX54-205ENST00000548786 COL12A1Q99715 3063 aa14.76□□□□□ -0.05
DDX54-205ENST00000548786 TRBV11-1A0A0K0K1C0 115 aa14.75□□□□□ -0.05
DDX54-205ENST00000548786 OR4F21O95013 312 aa14.75□□□□□ -0.05
DDX54-205ENST00000548786 OTCP00480 354 aa14.75□□□□□ -0.05
DDX54-205ENST00000548786 ATP5F1P24539 256 aaPredicted RBP14.75□□□□□ -0.05
DDX54-205ENST00000548786 HNRNPH2P55795 449 aaKnown RBP14.75□□□□□ -0.05
DDX54-205ENST00000548786 STX4Q12846 297 aa14.75□□□□□ -0.05
DDX54-205ENST00000548786 UNC50Q53HI1 259 aa14.75□□□□□ -0.05
DDX54-205ENST00000548786 TCHHL1Q5QJ38 904 aaPredicted RBP14.75□□□□□ -0.05
DDX54-205ENST00000548786 ZNF678Q5SXM1 525 aa14.75□□□□□ -0.05
DDX54-205ENST00000548786 FRG2Q64ET8 278 aa14.75□□□□□ -0.05
DDX54-205ENST00000548786 C18orf63Q68DL7 685 aa14.75□□□□□ -0.05
DDX54-205ENST00000548786 C4orf33Q8N1A6 199 aa14.75□□□□□ -0.05
DDX54-205ENST00000548786 SLC5A8Q8N695 610 aa14.75□□□□□ -0.05
DDX54-205ENST00000548786 CDYL2Q8N8U2 506 aa14.75□□□□□ -0.05
DDX54-205ENST00000548786 NFAM1Q8NET5 270 aaPredicted RBP14.75□□□□□ -0.05
DDX54-205ENST00000548786 ELP5Q8TE02 316 aa14.75□□□□□ -0.05
DDX54-205ENST00000548786 ZNF354BQ96LW1 612 aa14.75□□□□□ -0.05
DDX54-205ENST00000548786 FRG2BQ96QU4 278 aa14.75□□□□□ -0.05
DDX54-205ENST00000548786 NTMT1Q9BV86 223 aa14.75□□□□□ -0.05
DDX54-205ENST00000548786 ALOXE3Q9BYJ1 711 aa14.75□□□□□ -0.05
DDX54-205ENST00000548786 ELOVL6Q9H5J4 265 aa14.75□□□□□ -0.05
DDX54-205ENST00000548786 SETXQ7Z333 2677 aaKnown RBP14.74□□□□□ -0.05
DDX54-205ENST00000548786 OR5H15A6NDH6 313 aa14.74□□□□□ -0.05
DDX54-205ENST00000548786 GLOD5A6NK44 160 aa14.74□□□□□ -0.05
DDX54-205ENST00000548786 GABRR3A8MPY1 467 aa14.74□□□□□ -0.05
DDX54-205ENST00000548786 TMPRSS11DO60235 418 aa14.74□□□□□ -0.05
DDX54-205ENST00000548786 CTNSO60931 367 aa14.74□□□□□ -0.05
DDX54-205ENST00000548786 GLRA3O75311 464 aa14.74□□□□□ -0.05
DDX54-205ENST00000548786 SCELO95171 688 aa14.74□□□□□ -0.05
DDX54-205ENST00000548786 GSTA1P08263 222 aa14.74□□□□□ -0.05
DDX54-205ENST00000548786 TNNI3P19429 210 aa14.74□□□□□ -0.05
DDX54-205ENST00000548786 TSFMP43897 325 aaKnown RBP14.74□□□□□ -0.05
DDX54-205ENST00000548786 OC90Q02509 493 aaPredicted RBP14.74□□□□□ -0.05
DDX54-205ENST00000548786 CLCQ05315 142 aa14.74□□□□□ -0.05
DDX54-205ENST00000548786 TUBA3CQ13748 450 aa14.74□□□□□ -0.05
DDX54-205ENST00000548786 MEP1AQ16819 746 aa14.74□□□□□ -0.05
DDX54-205ENST00000548786 ERCC6LQ2NKX8 1250 aa14.74□□□□□ -0.05
DDX54-205ENST00000548786 TUBA3EQ6PEY2 450 aa14.74□□□□□ -0.05
DDX54-205ENST00000548786 CYP20A1Q6UW02 462 aa14.74□□□□□ -0.05
DDX54-205ENST00000548786 GPR180Q86V85 440 aa14.74□□□□□ -0.05
DDX54-205ENST00000548786 CCNYL1Q8N7R7 359 aa14.74□□□□□ -0.05
DDX54-205ENST00000548786 CCDC63Q8NA47 563 aa14.74□□□□□ -0.05
DDX54-205ENST00000548786 GALNT11Q8NCW6 608 aa14.74□□□□□ -0.05
DDX54-205ENST00000548786 B3GNT7Q8NFL0 401 aa14.74□□□□□ -0.05
DDX54-205ENST00000548786 GRHL3Q8TE85 626 aa14.74□□□□□ -0.05
DDX54-205ENST00000548786 DOK4Q8TEW6 326 aa14.74□□□□□ -0.05
DDX54-205ENST00000548786 HAS2Q92819 552 aa14.74□□□□□ -0.05
DDX54-205ENST00000548786 NCLNQ969V3 563 aa14.74□□□□□ -0.05
DDX54-205ENST00000548786 ZBTB9Q96C00 473 aa14.74□□□□□ -0.05
DDX54-205ENST00000548786 ZNF717Q9BY31 904 aaPredicted RBP14.74□□□□□ -0.05
DDX54-205ENST00000548786 MRPL1Q9BYD6 325 aaKnown RBP14.74□□□□□ -0.05
DDX54-205ENST00000548786 HES7Q9BYE0 225 aa14.74□□□□□ -0.05
DDX54-205ENST00000548786 DEFB126Q9BYW3 111 aa14.74□□□□□ -0.05
DDX54-205ENST00000548786 SLC29A3Q9BZD2 475 aa14.74□□□□□ -0.05
DDX54-205ENST00000548786 KLHL1Q9NR64 748 aa14.74□□□□□ -0.05
DDX54-205ENST00000548786 ABI3Q9P2A4 366 aa14.74□□□□□ -0.05
DDX54-205ENST00000548786 DCDC2Q9UHG0 476 aa14.74□□□□□ -0.05
DDX54-205ENST00000548786 SLC12A4Q9UP95 1085 aa14.74□□□□□ -0.05
DDX54-205ENST00000548786 TSC22D4Q9Y3Q8 395 aa14.74□□□□□ -0.05
DDX54-205ENST00000548786 ATG4BQ9Y4P1 393 aa14.74□□□□□ -0.05
DDX54-205ENST00000548786 TRAV17A0A0B4J275 112 aa14.73□□□□□ -0.05
DDX54-205ENST00000548786 WASHC1A8K0Z3 465 aa14.73□□□□□ -0.05
DDX54-205ENST00000548786 FOXE1O00358 373 aaPredicted RBP14.73□□□□□ -0.05
DDX54-205ENST00000548786 FGF17O60258 216 aa14.73□□□□□ -0.05
DDX54-205ENST00000548786 PDYNP01213 254 aa14.73□□□□□ -0.05
DDX54-205ENST00000548786 MYL2P10916 166 aa14.73□□□□□ -0.05
DDX54-205ENST00000548786 KRT4P19013 534 aa14.73□□□□□ -0.05
DDX54-205ENST00000548786 TPP2P29144 1249 aaPredicted RBP14.73□□□□□ -0.05
DDX54-205ENST00000548786 BSGP35613 385 aa14.73□□□□□ -0.05
DDX54-205ENST00000548786 PMP22Q01453 160 aa14.73□□□□□ -0.05
DDX54-205ENST00000548786 TNFRSF17Q02223 184 aa14.73□□□□□ -0.05
DDX54-205ENST00000548786 IFFO1Q0D2I5 559 aa14.73□□□□□ -0.05
DDX54-205ENST00000548786 CUL3Q13618 768 aa14.73□□□□□ -0.05
DDX54-205ENST00000548786 EIF2S3LQ2VIR3 472 aaKnown RBP14.73□□□□□ -0.05
DDX54-205ENST00000548786 H3F3CQ6NXT2 135 aa14.73□□□□□ -0.05
DDX54-205ENST00000548786 FAM180AQ6UWF9 173 aa14.73□□□□□ -0.05
DDX54-205ENST00000548786 C16orf47Q6ZP98 133 aaPredicted RBP14.73□□□□□ -0.05
DDX54-205ENST00000548786 LCA5Q86VQ0 697 aa14.73□□□□□ -0.05
DDX54-205ENST00000548786 RPS19BP1Q86WX3 136 aaKnown RBP14.73□□□□□ -0.05
DDX54-205ENST00000548786 NUDT13Q86X67 352 aa14.73□□□□□ -0.05
DDX54-205ENST00000548786 TDRPQ86YL5 185 aa14.73□□□□□ -0.05
DDX54-205ENST00000548786 ZNF321PQ8N8H1 164 aa14.73□□□□□ -0.05
DDX54-205ENST00000548786 SUN3Q8TAQ9 357 aa14.73□□□□□ -0.05
DDX54-205ENST00000548786 AENQ8WTP8 325 aaKnown RBP14.73□□□□□ -0.05
DDX54-205ENST00000548786 SELENOMQ8WWX9 145 aa14.73□□□□□ -0.05
DDX54-205ENST00000548786 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms