RNA–Protein interactions for RNA: ENST00000548573.5

SMARCD1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5 BASIC

Gene SMARCD1, Length 2,095 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-205ENST00000548573 RAB23Q9ULC3 237 aa9.43□□□□□ -0.9
SMARCD1-205ENST00000548573 MGAT4BQ9UQ53 548 aa9.43□□□□□ -0.9
SMARCD1-205ENST00000548573 RPL36Q9Y3U8 105 aaKnown RBP9.43□□□□□ -0.9
SMARCD1-205ENST00000548573 MAP4K5Q9Y4K4 846 aa9.43□□□□□ -0.9
SMARCD1-205ENST00000548573 CASP8AP2Q9UKL3 1982 aa9.43□□□□□ -0.9
SMARCD1-205ENST00000548573 A0A1W2PRB8 838 aa9.43□□□□□ -0.9
SMARCD1-205ENST00000548573 SLC5A10A0PJK1 596 aa9.43□□□□□ -0.9
SMARCD1-205ENST00000548573 MEIOCA2RUB1 952 aa9.43□□□□□ -0.9
SMARCD1-205ENST00000548573 OR2AG2A6NM03 316 aa9.43□□□□□ -0.9
SMARCD1-205ENST00000548573 H3BM21 787 aa9.43□□□□□ -0.9
SMARCD1-205ENST00000548573 PRRG1O14668 218 aa9.43□□□□□ -0.9
SMARCD1-205ENST00000548573 LGI1O95970 557 aa9.43□□□□□ -0.9
SMARCD1-205ENST00000548573 CYP2A6P11509 494 aaPredicted RBP9.43□□□□□ -0.9
SMARCD1-205ENST00000548573 ELNP15502 786 aa9.43□□□□□ -0.9
SMARCD1-205ENST00000548573 POU1F1P28069 291 aa9.43□□□□□ -0.9
SMARCD1-205ENST00000548573 SOX3P41225 446 aa9.43□□□□□ -0.9
SMARCD1-205ENST00000548573 BDKRB1P46663 353 aa9.43□□□□□ -0.9
SMARCD1-205ENST00000548573 DSTNP60981 165 aa9.43□□□□□ -0.9
SMARCD1-205ENST00000548573 MC1RQ01726 317 aa9.43□□□□□ -0.9
SMARCD1-205ENST00000548573 SCN1BQ07699 218 aa9.43□□□□□ -0.9
SMARCD1-205ENST00000548573 PUM1Q14671 1186 aaKnown RBP eCLIP9.43□□□□□ -0.9
SMARCD1-205ENST00000548573 BAK1Q16611 211 aa9.43□□□□□ -0.9
SMARCD1-205ENST00000548573 DUSP7Q16829 419 aa9.43□□□□□ -0.9
SMARCD1-205ENST00000548573 NANOGNBQ7Z5D8 188 aa9.43□□□□□ -0.9
SMARCD1-205ENST00000548573 GATAD2AQ86YP4 633 aa9.43□□□□□ -0.9
SMARCD1-205ENST00000548573 LAX1Q8IWV1 398 aa9.43□□□□□ -0.9
SMARCD1-205ENST00000548573 SLC34A3Q8N130 599 aa9.43□□□□□ -0.9
SMARCD1-205ENST00000548573 NANOGP1Q8N7R0 232 aa9.43□□□□□ -0.9
SMARCD1-205ENST00000548573 OR9Q1Q8NGQ5 310 aa9.43□□□□□ -0.9
SMARCD1-205ENST00000548573 SCAMP4Q969E2 229 aa9.43□□□□□ -0.9
SMARCD1-205ENST00000548573 FOPNLQ96NB1 174 aa9.43□□□□□ -0.9
SMARCD1-205ENST00000548573 IL4I1Q96RQ9 567 aa9.43□□□□□ -0.9
SMARCD1-205ENST00000548573 EFCAB11Q9BUY7 163 aa9.43□□□□□ -0.9
SMARCD1-205ENST00000548573 NDEL1Q9GZM8 345 aa9.43□□□□□ -0.9
SMARCD1-205ENST00000548573 TMEM245Q9H330 911 aa9.43□□□□□ -0.9
SMARCD1-205ENST00000548573 TRIM39Q9HCM9 518 aa9.43□□□□□ -0.9
SMARCD1-205ENST00000548573 DMRT3Q9NQL9 472 aa9.43□□□□□ -0.9
SMARCD1-205ENST00000548573 TMCC3Q9ULS5 477 aa9.43□□□□□ -0.9
SMARCD1-205ENST00000548573 CMAHPQ9Y471 501 aa9.43□□□□□ -0.9
SMARCD1-205ENST00000548573 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.42□□□□□ -0.9
SMARCD1-205ENST00000548573 A0A1W2PQ45 241 aaPredicted RBP9.42□□□□□ -0.9
SMARCD1-205ENST00000548573 A0A1W2PQY0 241 aa9.42□□□□□ -0.9
SMARCD1-205ENST00000548573 AP3D1O14617 1153 aa9.42□□□□□ -0.9
SMARCD1-205ENST00000548573 FFAR1O14842 300 aa9.42□□□□□ -0.9
SMARCD1-205ENST00000548573 SEC14L5O43304 696 aa9.42□□□□□ -0.9
SMARCD1-205ENST00000548573 TSPAN6O43657 245 aa9.42□□□□□ -0.9
SMARCD1-205ENST00000548573 TPST2O60704 377 aa9.42□□□□□ -0.9
SMARCD1-205ENST00000548573 IL1AP01583 271 aa9.42□□□□□ -0.9
SMARCD1-205ENST00000548573 SOD2P04179 222 aa9.42□□□□□ -0.9
SMARCD1-205ENST00000548573 SLC10A3P09131 477 aa9.42□□□□□ -0.9
SMARCD1-205ENST00000548573 UQCRC2P22695 453 aa9.42□□□□□ -0.9
SMARCD1-205ENST00000548573 CXCR2P25025 360 aa9.42□□□□□ -0.9
SMARCD1-205ENST00000548573 VIPR1P32241 457 aa9.42□□□□□ -0.9
SMARCD1-205ENST00000548573 PRLHRP49683 370 aa9.42□□□□□ -0.9
SMARCD1-205ENST00000548573 LIM2P55344 173 aa9.42□□□□□ -0.9
SMARCD1-205ENST00000548573 SLC7A9P82251 487 aa9.42□□□□□ -0.9
SMARCD1-205ENST00000548573 SREBF2Q12772 1141 aa9.42□□□□□ -0.9
SMARCD1-205ENST00000548573 ASAH1Q13510 395 aa9.42□□□□□ -0.9
SMARCD1-205ENST00000548573 C1DQ13901 141 aaKnown RBP9.42□□□□□ -0.9
SMARCD1-205ENST00000548573 RAB33AQ14088 237 aa9.42□□□□□ -0.9
SMARCD1-205ENST00000548573 LARS2Q15031 903 aaKnown RBP9.42□□□□□ -0.9
SMARCD1-205ENST00000548573 OCLNQ16625 522 aa9.42□□□□□ -0.9
SMARCD1-205ENST00000548573 GLYR1Q49A26 553 aaPredicted RBP9.42□□□□□ -0.9
SMARCD1-205ENST00000548573 LRRC73Q5JTD7 316 aa9.42□□□□□ -0.9
SMARCD1-205ENST00000548573 HENMT1Q5T8I9 393 aaKnown RBP9.42□□□□□ -0.9
SMARCD1-205ENST00000548573 MFSD4BQ5TF39 518 aa9.42□□□□□ -0.9
SMARCD1-205ENST00000548573 REEP3Q6NUK4 255 aa9.42□□□□□ -0.9
SMARCD1-205ENST00000548573 BRAT1Q6PJG6 821 aa9.42□□□□□ -0.9
SMARCD1-205ENST00000548573 GDPD4Q6W3E5 623 aa9.42□□□□□ -0.9
SMARCD1-205ENST00000548573 IKBIPQ70UQ0 350 aa9.42□□□□□ -0.9
SMARCD1-205ENST00000548573 HSD11B1LQ7Z5J1 315 aa9.42□□□□□ -0.9
SMARCD1-205ENST00000548573 FBXO15Q8NCQ5 510 aaPredicted RBP9.42□□□□□ -0.9
SMARCD1-205ENST00000548573 OR8J1Q8NGP2 316 aa9.42□□□□□ -0.9
SMARCD1-205ENST00000548573 OR5AK3PQ8NH89 298 aa9.42□□□□□ -0.9
SMARCD1-205ENST00000548573 VANGL1Q8TAA9 524 aaPredicted RBP9.42□□□□□ -0.9
SMARCD1-205ENST00000548573 SLC25A46Q96AG3 418 aa9.42□□□□□ -0.9
SMARCD1-205ENST00000548573 PDXPQ96GD0 296 aa9.42□□□□□ -0.9
SMARCD1-205ENST00000548573 SAMD11Q96NU1 681 aa9.42□□□□□ -0.9
SMARCD1-205ENST00000548573 DEPDC7Q96QD5 511 aa9.42□□□□□ -0.9
SMARCD1-205ENST00000548573 ZSCAN5AQ9BUG6 496 aa9.42□□□□□ -0.9
SMARCD1-205ENST00000548573 POLR2J2Q9GZM3 115 aaKnown RBP9.42□□□□□ -0.9
SMARCD1-205ENST00000548573 SLC22A4Q9H015 551 aa9.42□□□□□ -0.9
SMARCD1-205ENST00000548573 C11orf16Q9NQ32 467 aa9.42□□□□□ -0.9
SMARCD1-205ENST00000548573 STARD7Q9NQZ5 370 aa9.42□□□□□ -0.9
SMARCD1-205ENST00000548573 MRPL17Q9NRX2 175 aaKnown RBP9.42□□□□□ -0.9
SMARCD1-205ENST00000548573 SNTG1Q9NSN8 517 aa9.42□□□□□ -0.9
SMARCD1-205ENST00000548573 CFAP97Q9P2B7 532 aa9.42□□□□□ -0.9
SMARCD1-205ENST00000548573 RHCGQ9UBD6 479 aa9.42□□□□□ -0.9
SMARCD1-205ENST00000548573 FAM8A1Q9UBU6 413 aa9.42□□□□□ -0.9
SMARCD1-205ENST00000548573 CLEC2DQ9UHP7 191 aa9.42□□□□□ -0.9
SMARCD1-205ENST00000548573 SLC25A13Q9UJS0 675 aa9.42□□□□□ -0.9
SMARCD1-205ENST00000548573 SSR3Q9UNL2 185 aa9.42□□□□□ -0.9
SMARCD1-205ENST00000548573 ICKQ9UPZ9 632 aa9.42□□□□□ -0.9
SMARCD1-205ENST00000548573 INSL5Q9Y5Q6 135 aa9.42□□□□□ -0.9
SMARCD1-205ENST00000548573 SNX11Q9Y5W9 270 aa9.42□□□□□ -0.9
SMARCD1-205ENST00000548573 PLXNA2O75051 1894 aa9.42□□□□□ -0.9
SMARCD1-205ENST00000548573 OBSL1O75147 1896 aa9.42□□□□□ -0.9
SMARCD1-205ENST00000548573 COL4A6Q14031 1691 aa9.42□□□□□ -0.9
SMARCD1-205ENST00000548573 TRBV4-1A0A0J9YWV2 114 aa9.41□□□□□ -0.9
SMARCD1-205ENST00000548573 A0A1W2PQ09 198 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms