RNA–Protein interactions for RNA: ENST00000545689.2

COL4A6-209, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,380 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-209ENST00000545689 XKR5Q6UX68 686 aa12.03□□□□□ -0.48
COL4A6-209ENST00000545689 TSPYL5Q86VY4 417 aaPredicted RBP12.03□□□□□ -0.48
COL4A6-209ENST00000545689 PAQR7Q86WK9 346 aa12.03□□□□□ -0.48
COL4A6-209ENST00000545689 ARMC10Q8N2F6 343 aa12.03□□□□□ -0.48
COL4A6-209ENST00000545689 FAM86B1Q8N7N1 296 aa12.03□□□□□ -0.48
COL4A6-209ENST00000545689 OR52N2Q8NGI0 321 aa12.03□□□□□ -0.48
COL4A6-209ENST00000545689 SMOXQ9NWM0 555 aa12.03□□□□□ -0.48
COL4A6-209ENST00000545689 ERVK-18Q9QC07 812 aa12.03□□□□□ -0.48
COL4A6-209ENST00000545689 TJP1Q07157 1748 aa12.03□□□□□ -0.48
COL4A6-209ENST00000545689 DDX60Q8IY21 1712 aaKnown RBP12.03□□□□□ -0.48
COL4A6-209ENST00000545689 ADAMTSL3P82987 1691 aa12.03□□□□□ -0.48
COL4A6-209ENST00000545689 C9J4A7 227 aa12.02□□□□□ -0.48
COL4A6-209ENST00000545689 TMEM189-UBE2V1I3L0A0 370 aa12.02□□□□□ -0.48
COL4A6-209ENST00000545689 AHSA1O95433 338 aa12.02□□□□□ -0.48
COL4A6-209ENST00000545689 ADAP00813 363 aa12.02□□□□□ -0.48
COL4A6-209ENST00000545689 DCKP27707 260 aa12.02□□□□□ -0.48
COL4A6-209ENST00000545689 GATMP50440 423 aa12.02□□□□□ -0.48
COL4A6-209ENST00000545689 GAS6Q14393 721 aa12.02□□□□□ -0.48
COL4A6-209ENST00000545689 FAM214AQ32MH5 1076 aa12.02□□□□□ -0.48
COL4A6-209ENST00000545689 SLC37A3Q8NCC5 494 aa12.02□□□□□ -0.48
COL4A6-209ENST00000545689 SNIP1Q8TAD8 396 aaKnown RBP12.02□□□□□ -0.48
COL4A6-209ENST00000545689 PMEPA1Q969W9 287 aa12.02□□□□□ -0.48
COL4A6-209ENST00000545689 ARMC5Q96C12 935 aa12.02□□□□□ -0.48
COL4A6-209ENST00000545689 SHDQ96IW2 340 aa12.02□□□□□ -0.48
COL4A6-209ENST00000545689 FBRSQ9HAH7 460 aa12.02□□□□□ -0.48
COL4A6-209ENST00000545689 WDR6Q9NNW5 1121 aaKnown RBP12.02□□□□□ -0.48
COL4A6-209ENST00000545689 ZDHHC7Q9NXF8 308 aa12.02□□□□□ -0.48
COL4A6-209ENST00000545689 SH3PXD2BA1X283 911 aa12.02□□□□□ -0.48
COL4A6-209ENST00000545689 PROM1O43490 865 aa12.02□□□□□ -0.48
COL4A6-209ENST00000545689 ENTPD1P49961 510 aa12.02□□□□□ -0.48
COL4A6-209ENST00000545689 RPA4Q13156 261 aa12.02□□□□□ -0.48
COL4A6-209ENST00000545689 PRRT3Q5FWE3 981 aa12.02□□□□□ -0.48
COL4A6-209ENST00000545689 EIF5AL1Q6IS14 154 aaKnown RBP12.02□□□□□ -0.48
COL4A6-209ENST00000545689 SHKBP1Q8TBC3 707 aa12.02□□□□□ -0.48
COL4A6-209ENST00000545689 ZBED3Q96IU2 234 aaPredicted RBP12.02□□□□□ -0.48
COL4A6-209ENST00000545689 METTL2AQ96IZ6 378 aaKnown RBP12.02□□□□□ -0.48
COL4A6-209ENST00000545689 CCDC32Q9BV29 185 aa12.02□□□□□ -0.48
COL4A6-209ENST00000545689 GSTO2Q9H4Y5 243 aa12.02□□□□□ -0.48
COL4A6-209ENST00000545689 FKBP14Q9NWM8 211 aa12.02□□□□□ -0.48
COL4A6-209ENST00000545689 ZNF69Q9UC07 566 aa12.02□□□□□ -0.48
COL4A6-209ENST00000545689 ITGA3P26006 1051 aa12.02□□□□□ -0.49
COL4A6-209ENST00000545689 GKP32189 559 aa12.02□□□□□ -0.49
COL4A6-209ENST00000545689 ELAVL3Q14576 367 aaKnown RBP12.02□□□□□ -0.49
COL4A6-209ENST00000545689 ABCA11PQ4W5N1 156 aa12.02□□□□□ -0.49
COL4A6-209ENST00000545689 TMEM181Q9P2C4 612 aa12.02□□□□□ -0.49
COL4A6-209ENST00000545689 KIF13AQ9H1H9 1805 aa12.02□□□□□ -0.49
COL4A6-209ENST00000545689 DRGXA6NNA5 263 aa12.02□□□□□ -0.49
COL4A6-209ENST00000545689 DISC1C4P0D8 188 aa12.02□□□□□ -0.49
COL4A6-209ENST00000545689 ATP6V1G1O75348 118 aa12.02□□□□□ -0.49
COL4A6-209ENST00000545689 PGAM2P15259 253 aa12.02□□□□□ -0.49
COL4A6-209ENST00000545689 SPINT3P49223 89 aa12.02□□□□□ -0.49
COL4A6-209ENST00000545689 HNRNPA0Q13151 305 aaKnown RBP12.02□□□□□ -0.49
COL4A6-209ENST00000545689 ZNF613Q6PF04 617 aa12.02□□□□□ -0.49
COL4A6-209ENST00000545689 GALNTL5Q7Z4T8 443 aa12.02□□□□□ -0.49
COL4A6-209ENST00000545689 ZNF366Q8N895 744 aa12.02□□□□□ -0.49
COL4A6-209ENST00000545689 OR10Q1Q8NGQ4 319 aa12.02□□□□□ -0.49
COL4A6-209ENST00000545689 MAPK15Q8TD08 544 aa12.02□□□□□ -0.49
COL4A6-209ENST00000545689 LIN28AQ9H9Z2 209 aaKnown RBP12.02□□□□□ -0.49
COL4A6-209ENST00000545689 TRPV4Q9HBA0 871 aa12.02□□□□□ -0.49
COL4A6-209ENST00000545689 ENAMQ9NRM1 1142 aa12.02□□□□□ -0.49
COL4A6-209ENST00000545689 MKL2Q9ULH7 1088 aa12.02□□□□□ -0.49
COL4A6-209ENST00000545689 STUB1Q9UNE7 303 aa12.02□□□□□ -0.49
COL4A6-209ENST00000545689 LSM1O15116 133 aaKnown RBP12.02□□□□□ -0.49
COL4A6-209ENST00000545689 GBAP04062 536 aa12.02□□□□□ -0.49
COL4A6-209ENST00000545689 RHOP08100 348 aa12.02□□□□□ -0.49
COL4A6-209ENST00000545689 GSTT2P0CG29 244 aa12.02□□□□□ -0.49
COL4A6-209ENST00000545689 OR12D1P0DN82 309 aa12.02□□□□□ -0.49
COL4A6-209ENST00000545689 CASRP41180 1078 aa12.02□□□□□ -0.49
COL4A6-209ENST00000545689 RAB33AQ14088 237 aa12.02□□□□□ -0.49
COL4A6-209ENST00000545689 NFE2L1Q14494 772 aa12.02□□□□□ -0.49
COL4A6-209ENST00000545689 STX12Q86Y82 276 aa12.02□□□□□ -0.49
COL4A6-209ENST00000545689 ZNF440Q8IYI8 595 aa12.02□□□□□ -0.49
COL4A6-209ENST00000545689 TRIB2Q92519 343 aa12.02□□□□□ -0.49
COL4A6-209ENST00000545689 PRR11Q96HE9 360 aaPredicted RBP12.02□□□□□ -0.49
COL4A6-209ENST00000545689 H7BY64 318 aa12.01□□□□□ -0.49
COL4A6-209ENST00000545689 SLC1A7O00341 560 aa12.01□□□□□ -0.49
COL4A6-209ENST00000545689 RBMXL2O75526 392 aaKnown RBP12.01□□□□□ -0.49
COL4A6-209ENST00000545689 CLIC3O95833 236 aa12.01□□□□□ -0.49
COL4A6-209ENST00000545689 BPIP17213 487 aa12.01□□□□□ -0.49
COL4A6-209ENST00000545689 CTSOP43234 321 aaPredicted RBP12.01□□□□□ -0.49
COL4A6-209ENST00000545689 GPR143P51810 404 aa12.01□□□□□ -0.49
COL4A6-209ENST00000545689 UGT3A2Q3SY77 523 aa12.01□□□□□ -0.49
COL4A6-209ENST00000545689 PDSS1Q5T2R2 415 aa12.01□□□□□ -0.49
COL4A6-209ENST00000545689 OR52E8Q6IFG1 317 aa12.01□□□□□ -0.49
COL4A6-209ENST00000545689 PRSS48Q7RTY5 328 aa12.01□□□□□ -0.49
COL4A6-209ENST00000545689 AMIGO1Q86WK6 493 aa12.01□□□□□ -0.49
COL4A6-209ENST00000545689 NUP43Q8NFH3 380 aa12.01□□□□□ -0.49
COL4A6-209ENST00000545689 PXYLP1Q8TE99 480 aa12.01□□□□□ -0.49
COL4A6-209ENST00000545689 PRAP1Q96NZ9 151 aa12.01□□□□□ -0.49
COL4A6-209ENST00000545689 SORT1Q99523 831 aa12.01□□□□□ -0.49
COL4A6-209ENST00000545689 B3GNT4Q9C0J1 378 aa12.01□□□□□ -0.49
COL4A6-209ENST00000545689 MTMR10Q9NXD2 777 aa12.01□□□□□ -0.49
COL4A6-209ENST00000545689 RHCGQ9UBD6 479 aa12.01□□□□□ -0.49
COL4A6-209ENST00000545689 BTNL2Q9UIR0 455 aa12.01□□□□□ -0.49
COL4A6-209ENST00000545689 PCDHB14Q9Y5E9 798 aa12.01□□□□□ -0.49
COL4A6-209ENST00000545689 ST14Q9Y5Y6 855 aa12.01□□□□□ -0.49
COL4A6-209ENST00000545689 OR2AT4A6NND4 320 aa12.01□□□□□ -0.49
COL4A6-209ENST00000545689 SCRN3Q0VDG4 424 aa12.01□□□□□ -0.49
COL4A6-209ENST00000545689 MORN1Q5T089 497 aa12.01□□□□□ -0.49
COL4A6-209ENST00000545689 RAD9AQ99638 391 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms