RNA–Protein interactions for RNA: ENST00000544907.6

TNFAIP1-202, Transcript of TNF alpha induced protein 1, humanhuman

TSL 2 BASIC

Gene TNFAIP1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP1-202ENST00000544907 EXD2Q9NVH0 621 aa17.18■□□□□ 0.34
TNFAIP1-202ENST00000544907 WARS2Q9UGM6 360 aaKnown RBP17.18■□□□□ 0.34
TNFAIP1-202ENST00000544907 KCND3Q9UK17 655 aa17.18■□□□□ 0.34
TNFAIP1-202ENST00000544907 MAP4K5Q9Y4K4 846 aa17.18■□□□□ 0.34
TNFAIP1-202ENST00000544907 PCDHGA6Q9Y5G7 932 aa17.18■□□□□ 0.34
TNFAIP1-202ENST00000544907 NDUFS4O43181 175 aa17.17■□□□□ 0.34
TNFAIP1-202ENST00000544907 KDM1AO60341 852 aa17.17■□□□□ 0.34
TNFAIP1-202ENST00000544907 WBP4O75554 376 aaKnown RBP17.17■□□□□ 0.34
TNFAIP1-202ENST00000544907 CLPXO76031 633 aa17.17■□□□□ 0.34
TNFAIP1-202ENST00000544907 CYP4B1P13584 511 aa17.17■□□□□ 0.34
TNFAIP1-202ENST00000544907 HTR1BP28222 390 aa17.17■□□□□ 0.34
TNFAIP1-202ENST00000544907 CD6P30203 668 aa17.17■□□□□ 0.34
TNFAIP1-202ENST00000544907 STT3AP46977 705 aa17.17■□□□□ 0.34
TNFAIP1-202ENST00000544907 CLCNKAP51800 687 aa17.17■□□□□ 0.34
TNFAIP1-202ENST00000544907 CSNK1G2P78368 415 aa17.17■□□□□ 0.34
TNFAIP1-202ENST00000544907 IER5LQ5T953 404 aa17.17■□□□□ 0.34
TNFAIP1-202ENST00000544907 CCDC71Q8IV32 467 aaPredicted RBP17.17■□□□□ 0.34
TNFAIP1-202ENST00000544907 ENTHD1Q8IYW4 607 aa17.17■□□□□ 0.34
TNFAIP1-202ENST00000544907 HDDC3Q8N4P3 179 aa17.17■□□□□ 0.34
TNFAIP1-202ENST00000544907 ZNF540Q8NDQ6 660 aa17.17■□□□□ 0.34
TNFAIP1-202ENST00000544907 DENND6BQ8NEG7 585 aa17.17■□□□□ 0.34
TNFAIP1-202ENST00000544907 ASB12Q8WXK4 309 aa17.17■□□□□ 0.34
TNFAIP1-202ENST00000544907 FEVQ99581 238 aa17.17■□□□□ 0.34
TNFAIP1-202ENST00000544907 S1PR5Q9H228 398 aa17.17■□□□□ 0.34
TNFAIP1-202ENST00000544907 CUEDC1Q9NWM3 386 aaPredicted RBP17.17■□□□□ 0.34
TNFAIP1-202ENST00000544907 HCN4Q9Y3Q4 1203 aa17.17■□□□□ 0.34
TNFAIP1-202ENST00000544907 FAM32AQ9Y421 112 aaKnown RBP17.17■□□□□ 0.34
TNFAIP1-202ENST00000544907 XIRP2A4UGR9 3374 aa17.17■□□□□ 0.34
TNFAIP1-202ENST00000544907 PCDHGA12O60330 932 aa17.16■□□□□ 0.34
TNFAIP1-202ENST00000544907 BCAS1O75363 584 aaPredicted RBP17.16■□□□□ 0.34
TNFAIP1-202ENST00000544907 INMTO95050 263 aa17.16■□□□□ 0.34
TNFAIP1-202ENST00000544907 HOXC4P09017 264 aaPredicted RBP17.16■□□□□ 0.34
TNFAIP1-202ENST00000544907 PKLRP30613 574 aa17.16■□□□□ 0.34
TNFAIP1-202ENST00000544907 SOAT1P35610 550 aa17.16■□□□□ 0.34
TNFAIP1-202ENST00000544907 ENTPD1P49961 510 aa17.16■□□□□ 0.34
TNFAIP1-202ENST00000544907 ST13P50502 369 aaKnown RBP17.16■□□□□ 0.34
TNFAIP1-202ENST00000544907 MANFP55145 182 aaKnown RBP17.16■□□□□ 0.34
TNFAIP1-202ENST00000544907 IL1RL1Q01638 556 aa17.16■□□□□ 0.34
TNFAIP1-202ENST00000544907 SPIBQ01892 262 aa17.16■□□□□ 0.34
TNFAIP1-202ENST00000544907 CTF1Q16619 201 aa17.16■□□□□ 0.34
TNFAIP1-202ENST00000544907 ATAT1Q5SQI0 421 aa17.16■□□□□ 0.34
TNFAIP1-202ENST00000544907 LMNTD1Q8N9Z9 388 aa17.16■□□□□ 0.34
TNFAIP1-202ENST00000544907 LINC01555Q8NAE3 123 aa17.16■□□□□ 0.34
TNFAIP1-202ENST00000544907 RHOXF1Q8NHV9 184 aa17.16■□□□□ 0.34
TNFAIP1-202ENST00000544907 PPP1R14BQ96C90 147 aa17.16■□□□□ 0.34
TNFAIP1-202ENST00000544907 YIPF6Q96EC8 236 aa17.16■□□□□ 0.34
TNFAIP1-202ENST00000544907 SCARF2Q96GP6 870 aaPredicted RBP17.16■□□□□ 0.34
TNFAIP1-202ENST00000544907 RIPOR3Q96MK2 946 aa17.16■□□□□ 0.34
TNFAIP1-202ENST00000544907 F2RL3Q96RI0 385 aa17.16■□□□□ 0.34
TNFAIP1-202ENST00000544907 CSF3RQ99062 836 aa17.16■□□□□ 0.34
TNFAIP1-202ENST00000544907 ACAT2Q9BWD1 397 aa17.16■□□□□ 0.34
TNFAIP1-202ENST00000544907 CCDC90BQ9GZT6 254 aa17.16■□□□□ 0.34
TNFAIP1-202ENST00000544907 BTBD1Q9H0C5 482 aa17.16■□□□□ 0.34
TNFAIP1-202ENST00000544907 ZNF556Q9HAH1 456 aa17.16■□□□□ 0.34
TNFAIP1-202ENST00000544907 LHX9Q9NQ69 397 aa17.16■□□□□ 0.34
TNFAIP1-202ENST00000544907 MBNL1Q9NR56 388 aaKnown RBP17.16■□□□□ 0.34
TNFAIP1-202ENST00000544907 ERVK-18Q9QC07 812 aa17.16■□□□□ 0.34
TNFAIP1-202ENST00000544907 ACSL6Q9UKU0 697 aa17.16■□□□□ 0.34
TNFAIP1-202ENST00000544907 TESMINQ9Y4I5 508 aa17.16■□□□□ 0.34
TNFAIP1-202ENST00000544907 PCDHGA2Q9Y5H1 932 aa17.16■□□□□ 0.34
TNFAIP1-202ENST00000544907 FAM20BO75063 409 aa17.16■□□□□ 0.34
TNFAIP1-202ENST00000544907 IFNW1P05000 195 aa17.16■□□□□ 0.34
TNFAIP1-202ENST00000544907 ZNF182P17025 639 aaPredicted RBP17.16■□□□□ 0.34
TNFAIP1-202ENST00000544907 FMO3P31513 532 aa17.16■□□□□ 0.34
TNFAIP1-202ENST00000544907 KRT20P35900 424 aa17.16■□□□□ 0.34
TNFAIP1-202ENST00000544907 TSFMP43897 325 aaKnown RBP17.16■□□□□ 0.34
TNFAIP1-202ENST00000544907 ADPRMQ3LIE5 342 aa17.16■□□□□ 0.34
TNFAIP1-202ENST00000544907 C2orf27AQ580R0 203 aa17.16■□□□□ 0.34
TNFAIP1-202ENST00000544907 UBE2UQ5VVX9 321 aa17.16■□□□□ 0.34
TNFAIP1-202ENST00000544907 CEACAM20Q6UY09 585 aa17.16■□□□□ 0.34
TNFAIP1-202ENST00000544907 P3H2Q8IVL5 708 aa17.16■□□□□ 0.34
TNFAIP1-202ENST00000544907 LGI4Q8N135 537 aa17.16■□□□□ 0.34
TNFAIP1-202ENST00000544907 SLC5A8Q8N695 610 aa17.16■□□□□ 0.34
TNFAIP1-202ENST00000544907 FNDC8Q8TC99 324 aa17.16■□□□□ 0.34
TNFAIP1-202ENST00000544907 CREB3L4Q8TEY5 395 aa17.16■□□□□ 0.34
TNFAIP1-202ENST00000544907 APOBEC4Q8WW27 367 aaKnown RBP17.16■□□□□ 0.34
TNFAIP1-202ENST00000544907 TANKQ92844 425 aa17.16■□□□□ 0.34
TNFAIP1-202ENST00000544907 CAMK1GQ96NX5 476 aa17.16■□□□□ 0.34
TNFAIP1-202ENST00000544907 INSM2Q96T92 566 aaPredicted RBP17.16■□□□□ 0.34
TNFAIP1-202ENST00000544907 MAPKAP1Q9BPZ7 522 aa17.16■□□□□ 0.34
TNFAIP1-202ENST00000544907 DGCR6LQ9BY27 220 aa17.16■□□□□ 0.34
TNFAIP1-202ENST00000544907 ACOT13Q9NPJ3 140 aa17.16■□□□□ 0.34
TNFAIP1-202ENST00000544907 TM7SF3Q9NS93 570 aa17.16■□□□□ 0.34
TNFAIP1-202ENST00000544907 ACER3Q9NUN7 267 aa17.16■□□□□ 0.34
TNFAIP1-202ENST00000544907 TBC1D23Q9NUY8 699 aa17.16■□□□□ 0.34
TNFAIP1-202ENST00000544907 FKBP14Q9NWM8 211 aa17.16■□□□□ 0.34
TNFAIP1-202ENST00000544907 ZFR2Q9UPR6 939 aaKnown RBP17.16■□□□□ 0.34
TNFAIP1-202ENST00000544907 PRUNE2Q8WUY3 3088 aa17.16■□□□□ 0.34
TNFAIP1-202ENST00000544907 A0A0A6YYD5 115 aa17.15■□□□□ 0.34
TNFAIP1-202ENST00000544907 PRAMEF25A6NGN4 478 aa17.15■□□□□ 0.34
TNFAIP1-202ENST00000544907 H7BY64 318 aa17.15■□□□□ 0.34
TNFAIP1-202ENST00000544907 PLRG1O43660 514 aaKnown RBP17.15■□□□□ 0.34
TNFAIP1-202ENST00000544907 MPZL2O60487 215 aa17.15■□□□□ 0.34
TNFAIP1-202ENST00000544907 GUCY1B2O75343 617 aa17.15■□□□□ 0.34
TNFAIP1-202ENST00000544907 TFPTP0C1Z6 253 aa17.15■□□□□ 0.34
TNFAIP1-202ENST00000544907 EPHA2P29317 976 aa17.15■□□□□ 0.34
TNFAIP1-202ENST00000544907 AHRP35869 848 aa17.15■□□□□ 0.34
TNFAIP1-202ENST00000544907 SGCGQ13326 291 aa17.15■□□□□ 0.34
TNFAIP1-202ENST00000544907 SMAD4Q13485 552 aaKnown RBP17.15■□□□□ 0.34
TNFAIP1-202ENST00000544907 CLCA4Q14CN2 919 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms