RNA–Protein interactions for RNA: ENST00000543542.1

LTBR-212, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 367 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-212ENST00000543542 CATSPER2Q96P56 530 aa5.95□□□□□ -1.46
LTBR-212ENST00000543542 IP6K3Q96PC2 410 aa5.95□□□□□ -1.46
LTBR-212ENST00000543542 CSF3RQ99062 836 aa5.95□□□□□ -1.46
LTBR-212ENST00000543542 SORT1Q99523 831 aa5.95□□□□□ -1.46
LTBR-212ENST00000543542 CCT7Q99832 543 aa5.95□□□□□ -1.46
LTBR-212ENST00000543542 FAIM2Q9BWQ8 316 aa5.95□□□□□ -1.46
LTBR-212ENST00000543542 NUF2Q9BZD4 464 aa5.95□□□□□ -1.46
LTBR-212ENST00000543542 TGIF2Q9GZN2 237 aa5.95□□□□□ -1.46
LTBR-212ENST00000543542 C20orf27Q9GZN8 174 aa5.95□□□□□ -1.46
LTBR-212ENST00000543542 VN1R1Q9GZP7 353 aa5.95□□□□□ -1.46
LTBR-212ENST00000543542 DDX31Q9H8H2 851 aaKnown RBP5.95□□□□□ -1.46
LTBR-212ENST00000543542 PRDM9Q9NQV7 894 aa5.95□□□□□ -1.46
LTBR-212ENST00000543542 PNO1Q9NRX1 252 aaKnown RBP5.95□□□□□ -1.46
LTBR-212ENST00000543542 VTI1BQ9UEU0 232 aa5.95□□□□□ -1.46
LTBR-212ENST00000543542 MCM8Q9UJA3 840 aa5.95□□□□□ -1.46
LTBR-212ENST00000543542 ADAM29Q9UKF5 820 aa5.95□□□□□ -1.46
LTBR-212ENST00000543542 PSME2Q9UL46 239 aa5.95□□□□□ -1.46
LTBR-212ENST00000543542 POLHQ9Y253 713 aa5.95□□□□□ -1.46
LTBR-212ENST00000543542 POLR3HQ9Y535 204 aaPredicted RBP5.95□□□□□ -1.46
LTBR-212ENST00000543542 PTGDR2Q9Y5Y4 395 aa5.95□□□□□ -1.46
LTBR-212ENST00000543542 CACNA1AO00555 2505 aa5.95□□□□□ -1.46
LTBR-212ENST00000543542 SPTBN2O15020 2390 aa5.95□□□□□ -1.46
LTBR-212ENST00000543542 FER1L5A0AVI2 2057 aa5.95□□□□□ -1.46
LTBR-212ENST00000543542 ASPMQ8IZT6 3477 aa5.94□□□□□ -1.46
LTBR-212ENST00000543542 IGLV3-12A0A075B6K2 115 aa5.94□□□□□ -1.46
LTBR-212ENST00000543542 A0A0A6YYD5 115 aa5.94□□□□□ -1.46
LTBR-212ENST00000543542 NSG1A0A0A6YYJ2 146 aa5.94□□□□□ -1.46
LTBR-212ENST00000543542 MYOCOSA0A1B0GUC4 107 aa5.94□□□□□ -1.46
LTBR-212ENST00000543542 GLOD5A6NK44 160 aa5.94□□□□□ -1.46
LTBR-212ENST00000543542 TCP11X1B4DZS4 312 aa5.94□□□□□ -1.46
LTBR-212ENST00000543542 TERTO14746 1132 aaKnown RBP5.94□□□□□ -1.46
LTBR-212ENST00000543542 KLF11O14901 512 aa5.94□□□□□ -1.46
LTBR-212ENST00000543542 PCDH17O14917 1159 aa5.94□□□□□ -1.46
LTBR-212ENST00000543542 HDAC3O15379 428 aa5.94□□□□□ -1.46
LTBR-212ENST00000543542 PROM1O43490 865 aa5.94□□□□□ -1.46
LTBR-212ENST00000543542 DYRK3O43781 588 aa5.94□□□□□ -1.46
LTBR-212ENST00000543542 TMPRSS11DO60235 418 aa5.94□□□□□ -1.46
LTBR-212ENST00000543542 OR10H2O60403 315 aa5.94□□□□□ -1.46
LTBR-212ENST00000543542 LDB3O75112 727 aa5.94□□□□□ -1.46
LTBR-212ENST00000543542 VPS4BO75351 444 aa5.94□□□□□ -1.46
LTBR-212ENST00000543542 PRKRAO75569 313 aaKnown RBP5.94□□□□□ -1.46
LTBR-212ENST00000543542 ERAL1O75616 437 aaKnown RBP5.94□□□□□ -1.46
LTBR-212ENST00000543542 SCELO95171 688 aa5.94□□□□□ -1.46
LTBR-212ENST00000543542 UMODP07911 640 aa5.94□□□□□ -1.46
LTBR-212ENST00000543542 VIMP08670 466 aaKnown RBP5.94□□□□□ -1.46
LTBR-212ENST00000543542 IL3P08700 152 aa5.94□□□□□ -1.46
LTBR-212ENST00000543542 FURINP09958 794 aa5.94□□□□□ -1.46
LTBR-212ENST00000543542 COX7A2P14406 83 aa5.94□□□□□ -1.46
LTBR-212ENST00000543542 MAOAP21397 527 aa5.94□□□□□ -1.46
LTBR-212ENST00000543542 PIK3R1P27986 724 aa5.94□□□□□ -1.46
LTBR-212ENST00000543542 TPP2P29144 1249 aaPredicted RBP5.94□□□□□ -1.46
LTBR-212ENST00000543542 ARRB2P32121 409 aa5.94□□□□□ -1.46
LTBR-212ENST00000543542 HK2P52789 917 aa5.94□□□□□ -1.46
LTBR-212ENST00000543542 HNRNPH2P55795 449 aaKnown RBP5.94□□□□□ -1.46
LTBR-212ENST00000543542 HSD17B7P56937 341 aa5.94□□□□□ -1.46
LTBR-212ENST00000543542 TAS2R50P59544 299 aa5.94□□□□□ -1.46
LTBR-212ENST00000543542 TRA2BP62995 288 aaKnown RBP5.94□□□□□ -1.46
LTBR-212ENST00000543542 BTG2P78543 158 aa5.94□□□□□ -1.46
LTBR-212ENST00000543542 ID2Q02363 134 aa5.94□□□□□ -1.46
LTBR-212ENST00000543542 ZNF763Q0D2J5 394 aa5.94□□□□□ -1.46
LTBR-212ENST00000543542 C2orf80Q0P641 193 aa5.94□□□□□ -1.46
LTBR-212ENST00000543542 TBL3Q12788 808 aaKnown RBP5.94□□□□□ -1.46
LTBR-212ENST00000543542 CHAF1BQ13112 559 aa5.94□□□□□ -1.46
LTBR-212ENST00000543542 MAD2L1Q13257 205 aaPredicted RBP5.94□□□□□ -1.46
LTBR-212ENST00000543542 ATP1A4Q13733 1029 aa5.94□□□□□ -1.46
LTBR-212ENST00000543542 HEPACAMQ14CZ8 416 aa5.94□□□□□ -1.46
LTBR-212ENST00000543542 COL28A1Q2UY09 1125 aa5.94□□□□□ -1.46
LTBR-212ENST00000543542 UGT3A2Q3SY77 523 aa5.94□□□□□ -1.46
LTBR-212ENST00000543542 SFT2D3Q587I9 215 aa5.94□□□□□ -1.46
LTBR-212ENST00000543542 NDUFAF5Q5TEU4 345 aa5.94□□□□□ -1.46
LTBR-212ENST00000543542 C18orf63Q68DL7 685 aa5.94□□□□□ -1.46
LTBR-212ENST00000543542 OR52E8Q6IFG1 317 aa5.94□□□□□ -1.46
LTBR-212ENST00000543542 NOXRED1Q6NXP6 359 aa5.94□□□□□ -1.46
LTBR-212ENST00000543542 QSOX2Q6ZRP7 698 aa5.94□□□□□ -1.46
LTBR-212ENST00000543542 FAM47EQ6ZV65 393 aa5.94□□□□□ -1.46
LTBR-212ENST00000543542 LANCL3Q6ZV70 420 aa5.94□□□□□ -1.46
LTBR-212ENST00000543542 ACAD11Q709F0 780 aa5.94□□□□□ -1.46
LTBR-212ENST00000543542 GPR155Q7Z3F1 870 aa5.94□□□□□ -1.46
LTBR-212ENST00000543542 CPEB2Q7Z5Q1 589 aaKnown RBP5.94□□□□□ -1.46
LTBR-212ENST00000543542 MRGPREQ86SM8 312 aa5.94□□□□□ -1.46
LTBR-212ENST00000543542 OR4N5Q8IXE1 308 aa5.94□□□□□ -1.46
LTBR-212ENST00000543542 SHISA5Q8N114 240 aa5.94□□□□□ -1.46
LTBR-212ENST00000543542 CLEC1AQ8NC01 280 aa5.94□□□□□ -1.46
LTBR-212ENST00000543542 PLPP5Q8NEB5 264 aa5.94□□□□□ -1.46
LTBR-212ENST00000543542 C7orf57Q8NEG2 295 aa5.94□□□□□ -1.46
LTBR-212ENST00000543542 PIWIL2Q8TC59 973 aaKnown RBP5.94□□□□□ -1.46
LTBR-212ENST00000543542 C16orf78Q8WTQ4 265 aa5.94□□□□□ -1.46
LTBR-212ENST00000543542 TANKQ92844 425 aa5.94□□□□□ -1.46
LTBR-212ENST00000543542 TSLPQ969D9 159 aa5.94□□□□□ -1.46
LTBR-212ENST00000543542 DGAT2Q96PD7 388 aa5.94□□□□□ -1.46
LTBR-212ENST00000543542 LPAR4Q99677 370 aa5.94□□□□□ -1.46
LTBR-212ENST00000543542 C1orf50Q9BV19 199 aa5.94□□□□□ -1.46
LTBR-212ENST00000543542 ALOXE3Q9BYJ1 711 aa5.94□□□□□ -1.46
LTBR-212ENST00000543542 TUBB1Q9H4B7 451 aa5.94□□□□□ -1.46
LTBR-212ENST00000543542 RPF2Q9H7B2 306 aaKnown RBP5.94□□□□□ -1.46
LTBR-212ENST00000543542 ZNF160Q9HCG1 818 aa5.94□□□□□ -1.46
LTBR-212ENST00000543542 MIEF1Q9NQG6 463 aa5.94□□□□□ -1.46
LTBR-212ENST00000543542 NECTIN3Q9NQS3 549 aa5.94□□□□□ -1.46
LTBR-212ENST00000543542 LANCL2Q9NS86 450 aa5.94□□□□□ -1.46
LTBR-212ENST00000543542 GIMAP4Q9NUV9 329 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms