RNA–Protein interactions for RNA: ENST00000541341.5

CHFR-219, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-219ENST00000541341 SLC32A1Q9H598 525 aa9.97□□□□□ -0.81
CHFR-219ENST00000541341 PIF1Q9H611 641 aa9.97□□□□□ -0.81
CHFR-219ENST00000541341 THUMPD1Q9NXG2 353 aaKnown RBP9.97□□□□□ -0.81
CHFR-219ENST00000541341 ING3Q9NXR8 418 aa9.97□□□□□ -0.81
CHFR-219ENST00000541341 WWOXQ9NZC7 414 aa9.97□□□□□ -0.81
CHFR-219ENST00000541341 SLAMF8Q9P0V8 285 aa9.97□□□□□ -0.81
CHFR-219ENST00000541341 GIMAP2Q9UG22 337 aa9.97□□□□□ -0.81
CHFR-219ENST00000541341 ADAM30Q9UKF2 790 aa9.97□□□□□ -0.81
CHFR-219ENST00000541341 CCL27Q9Y4X3 112 aa9.97□□□□□ -0.81
CHFR-219ENST00000541341 NOX1Q9Y5S8 564 aa9.97□□□□□ -0.81
CHFR-219ENST00000541341 PTGDR2Q9Y5Y4 395 aa9.97□□□□□ -0.81
CHFR-219ENST00000541341 PMF1-BGLAPU3KQ54 211 aa9.97□□□□□ -0.81
CHFR-219ENST00000541341 IGF2RP11717 2491 aa9.97□□□□□ -0.81
CHFR-219ENST00000541341 DSPP15924 2871 aaKnown RBP9.96□□□□□ -0.81
CHFR-219ENST00000541341 IQCMA0A1B0GVH7 501 aa9.96□□□□□ -0.82
CHFR-219ENST00000541341 A0A1W2PQF6 199 aa9.96□□□□□ -0.82
CHFR-219ENST00000541341 PRRT4C9JH25 899 aa9.96□□□□□ -0.82
CHFR-219ENST00000541341 J3KR12 359 aa9.96□□□□□ -0.82
CHFR-219ENST00000541341 PPP6CO00743 305 aa9.96□□□□□ -0.82
CHFR-219ENST00000541341 OR7A17O14581 309 aa9.96□□□□□ -0.82
CHFR-219ENST00000541341 HOXC11O43248 304 aaPredicted RBP9.96□□□□□ -0.82
CHFR-219ENST00000541341 KDELR3O43731 214 aa9.96□□□□□ -0.82
CHFR-219ENST00000541341 CLDN11O75508 207 aa9.96□□□□□ -0.82
CHFR-219ENST00000541341 STK16O75716 305 aa9.96□□□□□ -0.82
CHFR-219ENST00000541341 TSPAN12O95859 305 aa9.96□□□□□ -0.82
CHFR-219ENST00000541341 SEMG1P04279 462 aa9.96□□□□□ -0.82
CHFR-219ENST00000541341 C8GP07360 202 aa9.96□□□□□ -0.82
CHFR-219ENST00000541341 HIST1H2AGP0C0S8 130 aaPredicted RBP9.96□□□□□ -0.82
CHFR-219ENST00000541341 DBTP11182 482 aaKnown RBP9.96□□□□□ -0.82
CHFR-219ENST00000541341 IL7P13232 177 aa9.96□□□□□ -0.82
CHFR-219ENST00000541341 TYRP14679 529 aa9.96□□□□□ -0.82
CHFR-219ENST00000541341 HIST1H2ADP20671 130 aa9.96□□□□□ -0.82
CHFR-219ENST00000541341 ITGALP20701 1170 aa9.96□□□□□ -0.82
CHFR-219ENST00000541341 CD6P30203 668 aa9.96□□□□□ -0.82
CHFR-219ENST00000541341 MC4RP32245 332 aa9.96□□□□□ -0.82
CHFR-219ENST00000541341 TNFRSF4P43489 277 aa9.96□□□□□ -0.82
CHFR-219ENST00000541341 MAP2K4P45985 399 aa9.96□□□□□ -0.82
CHFR-219ENST00000541341 DGKQP52824 942 aa9.96□□□□□ -0.82
CHFR-219ENST00000541341 PGGT1BP53609 377 aa9.96□□□□□ -0.82
CHFR-219ENST00000541341 SMIM11AP58511 58 aa9.96□□□□□ -0.82
CHFR-219ENST00000541341 IL1RL1Q01638 556 aa9.96□□□□□ -0.82
CHFR-219ENST00000541341 ASAH1Q13510 395 aa9.96□□□□□ -0.82
CHFR-219ENST00000541341 CAMK2BQ13554 666 aa9.96□□□□□ -0.82
CHFR-219ENST00000541341 ABRAXAS2Q15018 415 aa9.96□□□□□ -0.82
CHFR-219ENST00000541341 HKDC1Q2TB90 917 aa9.96□□□□□ -0.82
CHFR-219ENST00000541341 ZRANB3Q5FWF4 1079 aa9.96□□□□□ -0.82
CHFR-219ENST00000541341 SPANXN4Q5MJ08 99 aa9.96□□□□□ -0.82
CHFR-219ENST00000541341 ZNF362Q5T0B9 420 aaPredicted RBP9.96□□□□□ -0.82
CHFR-219ENST00000541341 TMEM236Q5W0B7 351 aa9.96□□□□□ -0.82
CHFR-219ENST00000541341 BICRALQ6AI39 1079 aa9.96□□□□□ -0.82
CHFR-219ENST00000541341 LETMD1Q6P1Q0 360 aa9.96□□□□□ -0.82
CHFR-219ENST00000541341 SLC23A3Q6PIS1 610 aa9.96□□□□□ -0.82
CHFR-219ENST00000541341 C19orf48Q6RUI8 117 aa9.96□□□□□ -0.82
CHFR-219ENST00000541341 TMPRSS11AQ6ZMR5 421 aa9.96□□□□□ -0.82
CHFR-219ENST00000541341 DSG4Q86SJ6 1040 aa9.96□□□□□ -0.82
CHFR-219ENST00000541341 CYP4Z1Q86W10 505 aa9.96□□□□□ -0.82
CHFR-219ENST00000541341 ETFBKMTQ8IXQ9 262 aa9.96□□□□□ -0.82
CHFR-219ENST00000541341 TCTE3Q8IZS6 198 aa9.96□□□□□ -0.82
CHFR-219ENST00000541341 NATD1Q8N6N6 113 aa9.96□□□□□ -0.82
CHFR-219ENST00000541341 CLDN22Q8N7P3 220 aa9.96□□□□□ -0.82
CHFR-219ENST00000541341 KDF1Q8NAX2 398 aaPredicted RBP9.96□□□□□ -0.82
CHFR-219ENST00000541341 HJURPQ8NCD3 748 aaPredicted RBP9.96□□□□□ -0.82
CHFR-219ENST00000541341 OR8J2Q8NGG1 315 aa9.96□□□□□ -0.82
CHFR-219ENST00000541341 SUN5Q8TC36 379 aa9.96□□□□□ -0.82
CHFR-219ENST00000541341 EEF1AKMT1Q8WVE0 214 aa9.96□□□□□ -0.82
CHFR-219ENST00000541341 IGSF8Q969P0 613 aa9.96□□□□□ -0.82
CHFR-219ENST00000541341 MYEOVQ96EZ4 313 aa9.96□□□□□ -0.82
CHFR-219ENST00000541341 HIST1H2AHQ96KK5 128 aa9.96□□□□□ -0.82
CHFR-219ENST00000541341 RPRD1AQ96P16 312 aaPredicted RBP9.96□□□□□ -0.82
CHFR-219ENST00000541341 COQ7Q99807 217 aa9.96□□□□□ -0.82
CHFR-219ENST00000541341 HIST1H2AJQ99878 128 aa9.96□□□□□ -0.82
CHFR-219ENST00000541341 H2AFJQ9BTM1 129 aa9.96□□□□□ -0.82
CHFR-219ENST00000541341 DOHHQ9BU89 302 aa9.96□□□□□ -0.82
CHFR-219ENST00000541341 CDADC1Q9BWV3 514 aa9.96□□□□□ -0.82
CHFR-219ENST00000541341 BBS2Q9BXC9 721 aa9.96□□□□□ -0.82
CHFR-219ENST00000541341 ELOVL6Q9H5J4 265 aa9.96□□□□□ -0.82
CHFR-219ENST00000541341 RPRD1BQ9NQG5 326 aaKnown RBP9.96□□□□□ -0.82
CHFR-219ENST00000541341 EVLQ9UI08 416 aaPredicted RBP9.96□□□□□ -0.82
CHFR-219ENST00000541341 BTNL2Q9UIR0 455 aa9.96□□□□□ -0.82
CHFR-219ENST00000541341 ZNF225Q9UK10 706 aa9.96□□□□□ -0.82
CHFR-219ENST00000541341 FBXO10Q9UK96 956 aa9.96□□□□□ -0.82
CHFR-219ENST00000541341 SLC6A14Q9UN76 642 aa9.96□□□□□ -0.82
CHFR-219ENST00000541341 ASB4Q9Y574 426 aa9.96□□□□□ -0.82
CHFR-219ENST00000541341 N6AMT1Q9Y5N5 214 aa9.96□□□□□ -0.82
CHFR-219ENST00000541341 SNX10Q9Y5X0 201 aa9.96□□□□□ -0.82
CHFR-219ENST00000541341 ARL5AQ9Y689 179 aa9.96□□□□□ -0.82
CHFR-219ENST00000541341 BPTFQ12830 3046 aa9.96□□□□□ -0.82
CHFR-219ENST00000541341 CACNA1EQ15878 2313 aa9.96□□□□□ -0.82
CHFR-219ENST00000541341 CACNA1GO43497 2377 aa9.96□□□□□ -0.82
CHFR-219ENST00000541341 FREM2Q5SZK8 3169 aa9.96□□□□□ -0.82
CHFR-219ENST00000541341 LAMA5O15230 3695 aa9.95□□□□□ -0.82
CHFR-219ENST00000541341 IGHV1OR15-9A0A0B4J2B8 117 aa9.95□□□□□ -0.82
CHFR-219ENST00000541341 CXorf51AA0A1B0GTR3 108 aa9.95□□□□□ -0.82
CHFR-219ENST00000541341 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.95□□□□□ -0.82
CHFR-219ENST00000541341 A0A1B0GVM2 712 aa9.95□□□□□ -0.82
CHFR-219ENST00000541341 MAGEB17A8MXT2 336 aa9.95□□□□□ -0.82
CHFR-219ENST00000541341 CLIC1O00299 241 aa9.95□□□□□ -0.82
CHFR-219ENST00000541341 SEC14L5O43304 696 aa9.95□□□□□ -0.82
CHFR-219ENST00000541341 SH3BP5O60239 455 aa9.95□□□□□ -0.82
CHFR-219ENST00000541341 HCN1O60741 890 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms