RNA–Protein interactions for RNA: ENST00000541169.1

VPS33A-205, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-205ENST00000541169 FURINP09958 794 aa17.66■□□□□ 0.42
VPS33A-205ENST00000541169 PCSK2P16519 638 aa17.66■□□□□ 0.42
VPS33A-205ENST00000541169 RPL14P50914 215 aaKnown RBP17.66■□□□□ 0.42
VPS33A-205ENST00000541169 HK2P52789 917 aa17.66■□□□□ 0.42
VPS33A-205ENST00000541169 SOX8P57073 446 aa17.66■□□□□ 0.42
VPS33A-205ENST00000541169 TNFRSF17Q02223 184 aa17.66■□□□□ 0.42
VPS33A-205ENST00000541169 SLC13A2Q13183 592 aa17.66■□□□□ 0.42
VPS33A-205ENST00000541169 ATP1A4Q13733 1029 aa17.66■□□□□ 0.42
VPS33A-205ENST00000541169 TERF2Q15554 542 aa17.66■□□□□ 0.42
VPS33A-205ENST00000541169 UGT3A2Q3SY77 523 aa17.66■□□□□ 0.42
VPS33A-205ENST00000541169 SPDYAQ5MJ70 313 aa17.66■□□□□ 0.42
VPS33A-205ENST00000541169 TCHHL1Q5QJ38 904 aaPredicted RBP17.66■□□□□ 0.42
VPS33A-205ENST00000541169 DCAF10Q5QP82 559 aa17.66■□□□□ 0.42
VPS33A-205ENST00000541169 CLEC6AQ6EIG7 209 aa17.66■□□□□ 0.42
VPS33A-205ENST00000541169 RIPOR1Q6ZS17 1223 aa17.66■□□□□ 0.42
VPS33A-205ENST00000541169 CPEB2Q7Z5Q1 589 aaKnown RBP17.66■□□□□ 0.42
VPS33A-205ENST00000541169 SCUBE1Q8IWY4 988 aa17.66■□□□□ 0.42
VPS33A-205ENST00000541169 PARP9Q8IXQ6 854 aa17.66■□□□□ 0.42
VPS33A-205ENST00000541169 ARFGAP2Q8N6H7 521 aa17.66■□□□□ 0.42
VPS33A-205ENST00000541169 EFCAB3Q8N7B9 438 aa17.66■□□□□ 0.42
VPS33A-205ENST00000541169 OR11G2Q8NGC1 345 aa17.66■□□□□ 0.42
VPS33A-205ENST00000541169 MGARPQ8TDB4 240 aa17.66■□□□□ 0.42
VPS33A-205ENST00000541169 MAPKAP1Q9BPZ7 522 aa17.66■□□□□ 0.42
VPS33A-205ENST00000541169 ARHGAP9Q9BRR9 750 aa17.66■□□□□ 0.42
VPS33A-205ENST00000541169 FAIM2Q9BWQ8 316 aa17.66■□□□□ 0.42
VPS33A-205ENST00000541169 ZNF700Q9H0M5 742 aa17.66■□□□□ 0.42
VPS33A-205ENST00000541169 ING2Q9H160 280 aa17.66■□□□□ 0.42
VPS33A-205ENST00000541169 RPF2Q9H7B2 306 aaKnown RBP17.66■□□□□ 0.42
VPS33A-205ENST00000541169 PRTFDC1Q9NRG1 225 aa17.66■□□□□ 0.42
VPS33A-205ENST00000541169 ASB4Q9Y574 426 aa17.66■□□□□ 0.42
VPS33A-205ENST00000541169 EPG5Q9HCE0 2579 aa17.66■□□□□ 0.42
VPS33A-205ENST00000541169 IGKV3D-11A0A0A0MRZ8 115 aa17.65■□□□□ 0.42
VPS33A-205ENST00000541169 NSG1A0A0A6YYJ2 146 aa17.65■□□□□ 0.42
VPS33A-205ENST00000541169 EEDO75530 441 aaKnown RBP17.65■□□□□ 0.42
VPS33A-205ENST00000541169 JRKO75564 520 aa17.65■□□□□ 0.42
VPS33A-205ENST00000541169 NR2F6P10588 404 aa17.65■□□□□ 0.42
VPS33A-205ENST00000541169 BGNP21810 368 aa17.65■□□□□ 0.42
VPS33A-205ENST00000541169 TPP2P29144 1249 aaPredicted RBP17.65■□□□□ 0.42
VPS33A-205ENST00000541169 HTR6P50406 440 aa17.65■□□□□ 0.42
VPS33A-205ENST00000541169 EXT1Q16394 746 aa17.65■□□□□ 0.42
VPS33A-205ENST00000541169 TBR1Q16650 682 aa17.65■□□□□ 0.42
VPS33A-205ENST00000541169 IRAK1BP1Q5VVH5 260 aa17.65■□□□□ 0.42
VPS33A-205ENST00000541169 LRRC34Q8IZ02 419 aa17.65■□□□□ 0.42
VPS33A-205ENST00000541169 C1orf52Q8N6N3 182 aaKnown RBP17.65■□□□□ 0.42
VPS33A-205ENST00000541169 TWIST2Q8WVJ9 160 aa17.65■□□□□ 0.42
VPS33A-205ENST00000541169 DYDC1Q8WWB3 177 aa17.65■□□□□ 0.42
VPS33A-205ENST00000541169 C11orf24Q96F05 449 aaPredicted RBP17.65■□□□□ 0.42
VPS33A-205ENST00000541169 HBEGFQ99075 208 aa17.65■□□□□ 0.42
VPS33A-205ENST00000541169 LPAR4Q99677 370 aa17.65■□□□□ 0.42
VPS33A-205ENST00000541169 PELOQ9BRX2 385 aaKnown RBP17.65■□□□□ 0.42
VPS33A-205ENST00000541169 MLXIPLQ9NP71 852 aa17.65■□□□□ 0.42
VPS33A-205ENST00000541169 C1orf109Q9NX04 203 aa17.65■□□□□ 0.42
VPS33A-205ENST00000541169 FBXL4Q9UKA2 621 aa17.65■□□□□ 0.42
VPS33A-205ENST00000541169 FBXW2Q9UKT8 454 aa17.65■□□□□ 0.42
VPS33A-205ENST00000541169 PSME2Q9UL46 239 aa17.65■□□□□ 0.42
VPS33A-205ENST00000541169 IGHV1-45A0A0A0MS14 117 aa17.64■□□□□ 0.41
VPS33A-205ENST00000541169 TCRBV16S1A1N1A0A5B0 115 aa17.64■□□□□ 0.41
VPS33A-205ENST00000541169 DYNC1I1O14576 645 aa17.64■□□□□ 0.41
VPS33A-205ENST00000541169 DNAJB6O75190 326 aa17.64■□□□□ 0.41
VPS33A-205ENST00000541169 CDC123O75794 336 aaPredicted RBP17.64■□□□□ 0.41
VPS33A-205ENST00000541169 DRD2P14416 443 aa17.64■□□□□ 0.41
VPS33A-205ENST00000541169 NR1D1P20393 614 aa17.64■□□□□ 0.41
VPS33A-205ENST00000541169 HMGCS1Q01581 520 aa17.64■□□□□ 0.41
VPS33A-205ENST00000541169 ACTN3Q08043 901 aaPredicted RBP17.64■□□□□ 0.41
VPS33A-205ENST00000541169 BST1Q10588 318 aa17.64■□□□□ 0.41
VPS33A-205ENST00000541169 STX4Q12846 297 aa17.64■□□□□ 0.41
VPS33A-205ENST00000541169 COL9A2Q14055 689 aaPredicted RBP17.64■□□□□ 0.41
VPS33A-205ENST00000541169 HEPACAMQ14CZ8 416 aa17.64■□□□□ 0.41
VPS33A-205ENST00000541169 SMU1Q2TAY7 513 aa17.64■□□□□ 0.41
VPS33A-205ENST00000541169 ATP1A1-AS1Q5TC04 95 aa17.64■□□□□ 0.41
VPS33A-205ENST00000541169 FAM69BQ5VUD6 431 aa17.64■□□□□ 0.41
VPS33A-205ENST00000541169 OR52E8Q6IFG1 317 aa17.64■□□□□ 0.41
VPS33A-205ENST00000541169 ANKRD37Q7Z713 158 aa17.64■□□□□ 0.41
VPS33A-205ENST00000541169 DDIASQ8IXT1 998 aa17.64■□□□□ 0.41
VPS33A-205ENST00000541169 SAMD14Q8IZD0 417 aaPredicted RBP17.64■□□□□ 0.41
VPS33A-205ENST00000541169 FAM47BQ8NA70 645 aa17.64■□□□□ 0.41
VPS33A-205ENST00000541169 PPP3R2Q96LZ3 170 aa17.64■□□□□ 0.41
VPS33A-205ENST00000541169 UBL7Q96S82 380 aaPredicted RBP17.64■□□□□ 0.41
VPS33A-205ENST00000541169 TNFRSF12AQ9NP84 129 aa17.64■□□□□ 0.41
VPS33A-205ENST00000541169 INTS9Q9NV88 658 aaKnown RBP17.64■□□□□ 0.41
VPS33A-205ENST00000541169 ZDHHC2Q9UIJ5 367 aa17.64■□□□□ 0.41
VPS33A-205ENST00000541169 LHX6Q9UPM6 363 aa17.64■□□□□ 0.41
VPS33A-205ENST00000541169 ATG4BQ9Y4P1 393 aa17.64■□□□□ 0.41
VPS33A-205ENST00000541169 PCDHGB7Q9Y5F8 929 aa17.64■□□□□ 0.41
VPS33A-205ENST00000541169 GNG14A0A1W2PPG7 69 aa17.63■□□□□ 0.41
VPS33A-205ENST00000541169 C1orf226A1L170 272 aa17.63■□□□□ 0.41
VPS33A-205ENST00000541169 FAM227AF5H4B4 570 aa17.63■□□□□ 0.41
VPS33A-205ENST00000541169 MKRN2OSH3BPM6 223 aa17.63■□□□□ 0.41
VPS33A-205ENST00000541169 TMPRSS11DO60235 418 aa17.63■□□□□ 0.41
VPS33A-205ENST00000541169 PCDH7O60245 1069 aa17.63■□□□□ 0.41
VPS33A-205ENST00000541169 SNNO75324 88 aaPredicted RBP17.63■□□□□ 0.41
VPS33A-205ENST00000541169 VPS4BO75351 444 aa17.63■□□□□ 0.41
VPS33A-205ENST00000541169 SEC22BO75396 215 aa17.63■□□□□ 0.41
VPS33A-205ENST00000541169 COX6A1P12074 109 aa17.63■□□□□ 0.41
VPS33A-205ENST00000541169 MAPK1P28482 360 aa17.63■□□□□ 0.41
VPS33A-205ENST00000541169 SERPINB3P29508 390 aa17.63■□□□□ 0.41
VPS33A-205ENST00000541169 TIA1P31483 386 aaKnown RBP eCLIP17.63■□□□□ 0.41
VPS33A-205ENST00000541169 OR4D2P58180 307 aa17.63■□□□□ 0.41
VPS33A-205ENST00000541169 MAD2L1Q13257 205 aaPredicted RBP17.63■□□□□ 0.41
VPS33A-205ENST00000541169 JMJD6Q6NYC1 403 aaPredicted RBP17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms