RNA–Protein interactions for RNA: ENST00000540891.1

CD9-209, Transcript of CD9 molecule, humanhuman

TSL 3

Gene CD9, Length 642 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-209ENST00000540891 CENPKQ9BS16 269 aa15.81■□□□□ 0.12
CD9-209ENST00000540891 ROPN1BQ9BZX4 212 aaPredicted RBP15.81■□□□□ 0.12
CD9-209ENST00000540891 DDX31Q9H8H2 851 aaKnown RBP15.81■□□□□ 0.12
CD9-209ENST00000540891 ROPN1Q9HAT0 212 aaPredicted RBP15.81■□□□□ 0.12
CD9-209ENST00000540891 KCNK13Q9HB14 408 aa15.81■□□□□ 0.12
CD9-209ENST00000540891 MKS1Q9NXB0 559 aa15.81■□□□□ 0.12
CD9-209ENST00000540891 PLA2G3Q9NZ20 509 aa15.81■□□□□ 0.12
CD9-209ENST00000540891 PLAAQ9Y263 795 aa15.81■□□□□ 0.12
CD9-209ENST00000540891 MRPS33Q9Y291 106 aaKnown RBP15.81■□□□□ 0.12
CD9-209ENST00000540891 ATG4BQ9Y4P1 393 aa15.81■□□□□ 0.12
CD9-209ENST00000540891 CPAMD8Q8IZJ3 1885 aa15.8■□□□□ 0.12
CD9-209ENST00000540891 MAN1A2O60476 641 aa15.8■□□□□ 0.12
CD9-209ENST00000540891 SEMA3DO95025 777 aa15.8■□□□□ 0.12
CD9-209ENST00000540891 PDYNP01213 254 aa15.8■□□□□ 0.12
CD9-209ENST00000540891 MYL2P10916 166 aa15.8■□□□□ 0.12
CD9-209ENST00000540891 CPN2P22792 545 aa15.8■□□□□ 0.12
CD9-209ENST00000540891 IFFO1Q0D2I5 559 aa15.8■□□□□ 0.12
CD9-209ENST00000540891 LCP2Q13094 533 aa15.8■□□□□ 0.12
CD9-209ENST00000540891 RCN2Q14257 317 aa15.8■□□□□ 0.12
CD9-209ENST00000540891 SGO1Q5FBB7 561 aa15.8■□□□□ 0.12
CD9-209ENST00000540891 C10orf62Q5T681 223 aaPredicted RBP15.8■□□□□ 0.12
CD9-209ENST00000540891 FCRLBQ6BAA4 426 aa15.8■□□□□ 0.12
CD9-209ENST00000540891 GPRIN3Q6ZVF9 776 aa15.8■□□□□ 0.12
CD9-209ENST00000540891 CRLF3Q8IUI8 442 aa15.8■□□□□ 0.12
CD9-209ENST00000540891 CDYL2Q8N8U2 506 aa15.8■□□□□ 0.12
CD9-209ENST00000540891 BANPQ8N9N5 519 aa15.8■□□□□ 0.12
CD9-209ENST00000540891 DNAJB14Q8TBM8 379 aa15.8■□□□□ 0.12
CD9-209ENST00000540891 ANKRD9Q96BM1 317 aaPredicted RBP15.8■□□□□ 0.12
CD9-209ENST00000540891 CCDC126Q96EE4 140 aa15.8■□□□□ 0.12
CD9-209ENST00000540891 TMEM109Q9BVC6 243 aa15.8■□□□□ 0.12
CD9-209ENST00000540891 ELOVL6Q9H5J4 265 aa15.8■□□□□ 0.12
CD9-209ENST00000540891 SLAMF7Q9NQ25 335 aa15.8■□□□□ 0.12
CD9-209ENST00000540891 PPIEQ9UNP9 301 aaKnown RBP15.8■□□□□ 0.12
CD9-209ENST00000540891 ASB4Q9Y574 426 aa15.8■□□□□ 0.12
CD9-209ENST00000540891 PCDHGA10Q9Y5H3 936 aa15.8■□□□□ 0.12
CD9-209ENST00000540891 MYOCOSA0A1B0GUC4 107 aa15.79■□□□□ 0.12
CD9-209ENST00000540891 A8MUI8 341 aa15.79■□□□□ 0.12
CD9-209ENST00000540891 UBFD1O14562 309 aaKnown RBP15.79■□□□□ 0.12
CD9-209ENST00000540891 LDB3O75112 727 aa15.79■□□□□ 0.12
CD9-209ENST00000540891 PRKRAO75569 313 aaKnown RBP15.79■□□□□ 0.12
CD9-209ENST00000540891 MYO1DO94832 1006 aa15.79■□□□□ 0.12
CD9-209ENST00000540891 WISP1O95388 367 aa15.79■□□□□ 0.12
CD9-209ENST00000540891 MLYCDO95822 493 aa15.79■□□□□ 0.12
CD9-209ENST00000540891 WDPCPO95876 746 aa15.79■□□□□ 0.12
CD9-209ENST00000540891 F10P00742 488 aa15.79■□□□□ 0.12
CD9-209ENST00000540891 GBAP04062 536 aa15.79■□□□□ 0.12
CD9-209ENST00000540891 GPR143P51810 404 aa15.79■□□□□ 0.12
CD9-209ENST00000540891 DNAJB13P59910 316 aa15.79■□□□□ 0.12
CD9-209ENST00000540891 TNFRSF17Q02223 184 aa15.79■□□□□ 0.12
CD9-209ENST00000540891 INPP5JQ15735 1006 aaPredicted RBP15.79■□□□□ 0.12
CD9-209ENST00000540891 C18orf63Q68DL7 685 aa15.79■□□□□ 0.12
CD9-209ENST00000540891 GPR180Q86V85 440 aa15.79■□□□□ 0.12
CD9-209ENST00000540891 NUDT13Q86X67 352 aa15.79■□□□□ 0.12
CD9-209ENST00000540891 EFCAB3Q8N7B9 438 aa15.79■□□□□ 0.12
CD9-209ENST00000540891 APCDD1LQ8NCL9 501 aa15.79■□□□□ 0.12
CD9-209ENST00000540891 RDH11Q8TC12 318 aa15.79■□□□□ 0.12
CD9-209ENST00000540891 CPT1CQ8TCG5 803 aa15.79■□□□□ 0.12
CD9-209ENST00000540891 AGAP11Q8TF27 550 aa15.79■□□□□ 0.12
CD9-209ENST00000540891 SELENOMQ8WWX9 145 aa15.79■□□□□ 0.12
CD9-209ENST00000540891 HAS2Q92819 552 aa15.79■□□□□ 0.12
CD9-209ENST00000540891 APOPT1Q96IL0 206 aa15.79■□□□□ 0.12
CD9-209ENST00000540891 CNDP1Q96KN2 507 aa15.79■□□□□ 0.12
CD9-209ENST00000540891 HBEGFQ99075 208 aa15.79■□□□□ 0.12
CD9-209ENST00000540891 MRPL1Q9BYD6 325 aaKnown RBP15.79■□□□□ 0.12
CD9-209ENST00000540891 RNF32Q9H0A6 362 aa15.79■□□□□ 0.12
CD9-209ENST00000540891 ILKAPQ9H0C8 392 aaPredicted RBP15.79■□□□□ 0.12
CD9-209ENST00000540891 PNO1Q9NRX1 252 aaKnown RBP15.79■□□□□ 0.12
CD9-209ENST00000540891 OXSMQ9NWU1 459 aa15.79■□□□□ 0.12
CD9-209ENST00000540891 ZNF223Q9UK11 482 aaPredicted RBP15.79■□□□□ 0.12
CD9-209ENST00000540891 SNX6Q9UNH7 406 aa15.79■□□□□ 0.12
CD9-209ENST00000540891 SPACA6W5XKT8 324 aa15.79■□□□□ 0.12
CD9-209ENST00000540891 A0A1W2PR48 441 aa15.78■□□□□ 0.12
CD9-209ENST00000540891 WASHC1A8K0Z3 465 aa15.78■□□□□ 0.12
CD9-209ENST00000540891 MANBAO00462 879 aa15.78■□□□□ 0.12
CD9-209ENST00000540891 PROM1O43490 865 aa15.78■□□□□ 0.12
CD9-209ENST00000540891 FGF17O60258 216 aa15.78■□□□□ 0.12
CD9-209ENST00000540891 CPA3P15088 417 aa15.78■□□□□ 0.12
CD9-209ENST00000540891 CREB1P16220 341 aa15.78■□□□□ 0.12
CD9-209ENST00000540891 TPP2P29144 1249 aaPredicted RBP15.78■□□□□ 0.12
CD9-209ENST00000540891 HTR6P50406 440 aa15.78■□□□□ 0.12
CD9-209ENST00000540891 NAGLUP54802 743 aa15.78■□□□□ 0.12
CD9-209ENST00000540891 PKNOX1P55347 436 aa15.78■□□□□ 0.12
CD9-209ENST00000540891 ARG2P78540 354 aa15.78■□□□□ 0.12
CD9-209ENST00000540891 IGLV3-21P80748 117 aaPredicted RBP15.78■□□□□ 0.12
CD9-209ENST00000540891 ID2Q02363 134 aa15.78■□□□□ 0.12
CD9-209ENST00000540891 ZNF33BQ06732 778 aa15.78■□□□□ 0.12
CD9-209ENST00000540891 ZNF844Q08AG5 666 aa15.78■□□□□ 0.12
CD9-209ENST00000540891 TBL3Q12788 808 aaKnown RBP15.78■□□□□ 0.12
CD9-209ENST00000540891 ZNF169Q14929 603 aaPredicted RBP15.78■□□□□ 0.12
CD9-209ENST00000540891 PCLAFQ15004 111 aa15.78■□□□□ 0.12
CD9-209ENST00000540891 TLR1Q15399 786 aa15.78■□□□□ 0.12
CD9-209ENST00000540891 TERF2Q15554 542 aa15.78■□□□□ 0.12
CD9-209ENST00000540891 ACER2Q5QJU3 275 aa15.78■□□□□ 0.12
CD9-209ENST00000540891 ABHD17BQ5VST6 288 aa15.78■□□□□ 0.12
CD9-209ENST00000540891 SRRM1Q8IYB3 904 aaKnown RBP15.78■□□□□ 0.12
CD9-209ENST00000540891 BEST3Q8N1M1 668 aa15.78■□□□□ 0.12
CD9-209ENST00000540891 METTL4Q8N3J2 472 aa15.78■□□□□ 0.12
CD9-209ENST00000540891 CCNYL1Q8N7R7 359 aa15.78■□□□□ 0.12
CD9-209ENST00000540891 B3GNT7Q8NFL0 401 aa15.78■□□□□ 0.12
CD9-209ENST00000540891 UCN3Q969E3 161 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms