RNA–Protein interactions for RNA: ENST00000540865.5

SNHG1-214, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 784 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-214ENST00000540865 HEPHL1Q6MZM0 1159 aa4.27□□□□□ -1.73
SNHG1-214ENST00000540865 KIAA0408Q6ZU52 694 aa4.27□□□□□ -1.73
SNHG1-214ENST00000540865 APTXQ7Z2E3 356 aaKnown RBP4.27□□□□□ -1.73
SNHG1-214ENST00000540865 THNSL2Q86YJ6 484 aa4.27□□□□□ -1.73
SNHG1-214ENST00000540865 RFX6Q8HWS3 928 aa4.27□□□□□ -1.73
SNHG1-214ENST00000540865 CYP4Z2PQ8N1L4 340 aa4.27□□□□□ -1.73
SNHG1-214ENST00000540865 RELL2Q8NC24 303 aaPredicted RBP4.27□□□□□ -1.73
SNHG1-214ENST00000540865 OR9A4Q8NGU2 314 aa4.27□□□□□ -1.73
SNHG1-214ENST00000540865 OR51Q1Q8NH59 317 aa4.27□□□□□ -1.73
SNHG1-214ENST00000540865 CFAP61Q8NHU2 1237 aa4.27□□□□□ -1.73
SNHG1-214ENST00000540865 SMPDL3BQ92485 455 aa4.27□□□□□ -1.73
SNHG1-214ENST00000540865 SLCO2A1Q92959 643 aa4.27□□□□□ -1.73
SNHG1-214ENST00000540865 DACT3Q96B18 629 aaPredicted RBP4.27□□□□□ -1.73
SNHG1-214ENST00000540865 DNAJC1Q96KC8 554 aaKnown RBP4.27□□□□□ -1.73
SNHG1-214ENST00000540865 OR2A5Q96R48 311 aa4.27□□□□□ -1.73
SNHG1-214ENST00000540865 TSSK1BQ9BXA7 367 aa4.27□□□□□ -1.73
SNHG1-214ENST00000540865 GBA3Q9H227 469 aa4.27□□□□□ -1.73
SNHG1-214ENST00000540865 ARNT2Q9HBZ2 717 aa4.27□□□□□ -1.73
SNHG1-214ENST00000540865 NLE1Q9NVX2 485 aaPredicted RBP4.27□□□□□ -1.73
SNHG1-214ENST00000540865 UTP6Q9NYH9 597 aaKnown RBP4.27□□□□□ -1.73
SNHG1-214ENST00000540865 SPATA7Q9P0W8 599 aa4.27□□□□□ -1.73
SNHG1-214ENST00000540865 UVRAGQ9P2Y5 699 aa4.27□□□□□ -1.73
SNHG1-214ENST00000540865 ZNF629Q9UEG4 869 aaPredicted RBP4.27□□□□□ -1.73
SNHG1-214ENST00000540865 CIDEBQ9UHD4 219 aa4.27□□□□□ -1.73
SNHG1-214ENST00000540865 AAR2Q9Y312 384 aaKnown RBP4.27□□□□□ -1.73
SNHG1-214ENST00000540865 PCDHGB3Q9Y5G1 929 aa4.27□□□□□ -1.73
SNHG1-214ENST00000540865 DUSP10Q9Y6W6 482 aa4.27□□□□□ -1.73
SNHG1-214ENST00000540865 CPAMD8Q8IZJ3 1885 aa4.26□□□□□ -1.73
SNHG1-214ENST00000540865 MGAM2Q2M2H8 2515 aa4.26□□□□□ -1.73
SNHG1-214ENST00000540865 A0A0U1RQJ8 604 aa4.26□□□□□ -1.73
SNHG1-214ENST00000540865 OR2W5A6NFC9 320 aa4.26□□□□□ -1.73
SNHG1-214ENST00000540865 FAM166BA8MTA8 275 aa4.26□□□□□ -1.73
SNHG1-214ENST00000540865 HACD1B0YJ81 288 aa4.26□□□□□ -1.73
SNHG1-214ENST00000540865 PHF1O43189 567 aaPredicted RBP4.26□□□□□ -1.73
SNHG1-214ENST00000540865 HCN1O60741 890 aa4.26□□□□□ -1.73
SNHG1-214ENST00000540865 DNAJB6O75190 326 aa4.26□□□□□ -1.73
SNHG1-214ENST00000540865 GLSO94925 669 aaPredicted RBP4.26□□□□□ -1.73
SNHG1-214ENST00000540865 CCNDBP1O95273 360 aa4.26□□□□□ -1.73
SNHG1-214ENST00000540865 C1orf105O95561 183 aa4.26□□□□□ -1.73
SNHG1-214ENST00000540865 CNOT4O95628 575 aaKnown RBP4.26□□□□□ -1.73
SNHG1-214ENST00000540865 TUBB4AP04350 444 aa4.26□□□□□ -1.73
SNHG1-214ENST00000540865 APOA4P06727 396 aa4.26□□□□□ -1.73
SNHG1-214ENST00000540865 SKILP12757 684 aa4.26□□□□□ -1.73
SNHG1-214ENST00000540865 BMP5P22003 454 aa4.26□□□□□ -1.73
SNHG1-214ENST00000540865 NR0B1P51843 470 aaKnown RBP4.26□□□□□ -1.73
SNHG1-214ENST00000540865 CSE1LP55060 971 aaKnown RBP4.26□□□□□ -1.73
SNHG1-214ENST00000540865 OR4D2P58180 307 aa4.26□□□□□ -1.73
SNHG1-214ENST00000540865 DYNLT1P63172 113 aa4.26□□□□□ -1.73
SNHG1-214ENST00000540865 RHAGQ02094 409 aa4.26□□□□□ -1.73
SNHG1-214ENST00000540865 PLGLB1Q02325 96 aa4.26□□□□□ -1.73
SNHG1-214ENST00000540865 DMTNQ08495 405 aa4.26□□□□□ -1.73
SNHG1-214ENST00000540865 DBPQ10586 325 aaPredicted RBP4.26□□□□□ -1.73
SNHG1-214ENST00000540865 TFDP2Q14188 446 aa4.26□□□□□ -1.73
SNHG1-214ENST00000540865 LRRC38Q5VT99 294 aa4.26□□□□□ -1.73
SNHG1-214ENST00000540865 KCTD11Q693B1 232 aa4.26□□□□□ -1.73
SNHG1-214ENST00000540865 VASNQ6EMK4 673 aa4.26□□□□□ -1.73
SNHG1-214ENST00000540865 ITPRIPL1Q6GPH6 555 aa4.26□□□□□ -1.73
SNHG1-214ENST00000540865 KIAA0930Q6ICG6 404 aaPredicted RBP4.26□□□□□ -1.73
SNHG1-214ENST00000540865 ZNF425Q6IV72 752 aa4.26□□□□□ -1.73
SNHG1-214ENST00000540865 TRILQ7L0X0 811 aa4.26□□□□□ -1.73
SNHG1-214ENST00000540865 MAATS1Q7Z4T9 603 aa4.26□□□□□ -1.73
SNHG1-214ENST00000540865 MDGA2Q7Z553 956 aa4.26□□□□□ -1.73
SNHG1-214ENST00000540865 STRA8Q7Z7C7 330 aa4.26□□□□□ -1.73
SNHG1-214ENST00000540865 SLC22A16Q86VW1 577 aa4.26□□□□□ -1.73
SNHG1-214ENST00000540865 HIPK1Q86Z02 1210 aa4.26□□□□□ -1.73
SNHG1-214ENST00000540865 VRK3Q8IV63 474 aa4.26□□□□□ -1.73
SNHG1-214ENST00000540865 GPALPP1Q8IXQ4 340 aa4.26□□□□□ -1.73
SNHG1-214ENST00000540865 FAM109AQ8N4B1 249 aa4.26□□□□□ -1.73
SNHG1-214ENST00000540865 KIF2BQ8N4N8 673 aa4.26□□□□□ -1.73
SNHG1-214ENST00000540865 TMEM156Q8N614 296 aa4.26□□□□□ -1.73
SNHG1-214ENST00000540865 LINC00482Q8N8I6 264 aa4.26□□□□□ -1.73
SNHG1-214ENST00000540865 OR2M7Q8NG81 312 aa4.26□□□□□ -1.73
SNHG1-214ENST00000540865 MAGEC3Q8TD91 643 aa4.26□□□□□ -1.73
SNHG1-214ENST00000540865 STYXQ8WUJ0 223 aa4.26□□□□□ -1.73
SNHG1-214ENST00000540865 SMPDL3AQ92484 453 aa4.26□□□□□ -1.73
SNHG1-214ENST00000540865 SYN2Q92777 582 aaPredicted RBP4.26□□□□□ -1.73
SNHG1-214ENST00000540865 SARAFQ96BY9 339 aa4.26□□□□□ -1.73
SNHG1-214ENST00000540865 LRRC45Q96CN5 670 aa4.26□□□□□ -1.73
SNHG1-214ENST00000540865 CDKN2AIPNLQ96HQ2 116 aa4.26□□□□□ -1.73
SNHG1-214ENST00000540865 DACH2Q96NX9 599 aa4.26□□□□□ -1.73
SNHG1-214ENST00000540865 PPP1R2P1Q96PQ5 205 aa4.26□□□□□ -1.73
SNHG1-214ENST00000540865 QKIQ96PU8 341 aaKnown RBP eCLIP4.26□□□□□ -1.73
SNHG1-214ENST00000540865 OR1F2PQ96R84 312 aa4.26□□□□□ -1.73
SNHG1-214ENST00000540865 TTC1Q99614 292 aa4.26□□□□□ -1.73
SNHG1-214ENST00000540865 APOL2Q9BQE5 337 aa4.26□□□□□ -1.73
SNHG1-214ENST00000540865 CARD6Q9BX69 1037 aa4.26□□□□□ -1.73
SNHG1-214ENST00000540865 DEFB126Q9BYW3 111 aa4.26□□□□□ -1.73
SNHG1-214ENST00000540865 SYNPO2LQ9H987 977 aa4.26□□□□□ -1.73
SNHG1-214ENST00000540865 MRPS30Q9NP92 439 aaKnown RBP4.26□□□□□ -1.73
SNHG1-214ENST00000540865 LANCL2Q9NS86 450 aa4.26□□□□□ -1.73
SNHG1-214ENST00000540865 CTTNBP2NLQ9P2B4 639 aa4.26□□□□□ -1.73
SNHG1-214ENST00000540865 SAE1Q9UBE0 346 aaPredicted RBP4.26□□□□□ -1.73
SNHG1-214ENST00000540865 ACAD8Q9UKU7 415 aa4.26□□□□□ -1.73
SNHG1-214ENST00000540865 BZW2Q9Y6E2 419 aaKnown RBP4.26□□□□□ -1.73
SNHG1-214ENST00000540865 DNAJC13O75165 2243 aa4.26□□□□□ -1.73
SNHG1-214ENST00000540865 IGKV1-8A0A0C4DH67 115 aa4.25□□□□□ -1.73
SNHG1-214ENST00000540865 A0A1W2PPR1 153 aa4.25□□□□□ -1.73
SNHG1-214ENST00000540865 PINLYPA6NC86 204 aa4.25□□□□□ -1.73
SNHG1-214ENST00000540865 MBD3L4A6NDZ8 208 aaPredicted RBP4.25□□□□□ -1.73
SNHG1-214ENST00000540865 MBD3L5A6NJ08 208 aaPredicted RBP4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms