RNA–Protein interactions for RNA: ENST00000539533.3

PCDHB17P-201, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 2,393 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-201ENST00000539533 ATAD3AQ9NVI7 634 aa16.28■□□□□ 0.2
PCDHB17P-201ENST00000539533 DNAJB9Q9UBS3 223 aa16.28■□□□□ 0.2
PCDHB17P-201ENST00000539533 MUTYHQ9UIF7 546 aa16.28■□□□□ 0.2
PCDHB17P-201ENST00000539533 SNRNP200O75643 2136 aaKnown RBP16.28■□□□□ 0.2
PCDHB17P-201ENST00000539533 ABCA7Q8IZY2 2146 aa16.28■□□□□ 0.2
PCDHB17P-201ENST00000539533 PLXND1Q9Y4D7 1925 aa16.27■□□□□ 0.2
PCDHB17P-201ENST00000539533 GOLGA4Q13439 2230 aaKnown RBP16.27■□□□□ 0.2
PCDHB17P-201ENST00000539533 ISM1B1AKI9 464 aa16.27■□□□□ 0.2
PCDHB17P-201ENST00000539533 BTN3A3O00478 584 aa16.27■□□□□ 0.2
PCDHB17P-201ENST00000539533 BCAS1O75363 584 aaPredicted RBP16.27■□□□□ 0.2
PCDHB17P-201ENST00000539533 KLHL18O94889 574 aa16.27■□□□□ 0.2
PCDHB17P-201ENST00000539533 GSNP06396 782 aa16.27■□□□□ 0.2
PCDHB17P-201ENST00000539533 KLK1P06870 262 aa16.27■□□□□ 0.2
PCDHB17P-201ENST00000539533 CHRM5P08912 532 aaPredicted RBP16.27■□□□□ 0.2
PCDHB17P-201ENST00000539533 COX7A2P14406 83 aa16.27■□□□□ 0.2
PCDHB17P-201ENST00000539533 HOXB3P14651 431 aaPredicted RBP16.27■□□□□ 0.2
PCDHB17P-201ENST00000539533 CD27P26842 260 aa16.27■□□□□ 0.2
PCDHB17P-201ENST00000539533 OPRL1P41146 370 aa16.27■□□□□ 0.2
PCDHB17P-201ENST00000539533 KIR3DL1P43629 444 aa16.27■□□□□ 0.2
PCDHB17P-201ENST00000539533 RPL6Q02878 288 aaKnown RBP16.27■□□□□ 0.2
PCDHB17P-201ENST00000539533 EPS8Q12929 822 aa16.27■□□□□ 0.2
PCDHB17P-201ENST00000539533 CTU2Q2VPK5 515 aaKnown RBP16.27■□□□□ 0.2
PCDHB17P-201ENST00000539533 ENPP6Q6UWR7 440 aa16.27■□□□□ 0.2
PCDHB17P-201ENST00000539533 SLC16A12Q6ZSM3 486 aa16.27■□□□□ 0.2
PCDHB17P-201ENST00000539533 TMCO5AQ8N6Q1 288 aa16.27■□□□□ 0.2
PCDHB17P-201ENST00000539533 OR8J3Q8NGG0 315 aa16.27■□□□□ 0.2
PCDHB17P-201ENST00000539533 FBXO30Q8TB52 745 aa16.27■□□□□ 0.2
PCDHB17P-201ENST00000539533 MUL1Q969V5 352 aa16.27■□□□□ 0.2
PCDHB17P-201ENST00000539533 F2RL3Q96RI0 385 aa16.27■□□□□ 0.2
PCDHB17P-201ENST00000539533 ZNF347Q96SE7 839 aa16.27■□□□□ 0.2
PCDHB17P-201ENST00000539533 OSBPL10Q9BXB5 764 aa16.27■□□□□ 0.2
PCDHB17P-201ENST00000539533 DGCR6LQ9BY27 220 aa16.27■□□□□ 0.2
PCDHB17P-201ENST00000539533 REXO4Q9GZR2 422 aaKnown RBP16.27■□□□□ 0.2
PCDHB17P-201ENST00000539533 GORASP2Q9H8Y8 452 aa16.27■□□□□ 0.2
PCDHB17P-201ENST00000539533 OR6C2Q9NZP2 312 aa16.27■□□□□ 0.2
PCDHB17P-201ENST00000539533 DAPK2Q9UIK4 370 aa16.27■□□□□ 0.2
PCDHB17P-201ENST00000539533 SIT1Q9Y3P8 196 aa16.27■□□□□ 0.2
PCDHB17P-201ENST00000539533 LAMA1P25391 3075 aa16.27■□□□□ 0.2
PCDHB17P-201ENST00000539533 GABRR3A8MPY1 467 aa16.27■□□□□ 0.19
PCDHB17P-201ENST00000539533 KPNA4O00629 521 aaPredicted RBP16.27■□□□□ 0.19
PCDHB17P-201ENST00000539533 KDM1AO60341 852 aa16.27■□□□□ 0.19
PCDHB17P-201ENST00000539533 NOBOXO60393 691 aa16.27■□□□□ 0.19
PCDHB17P-201ENST00000539533 CTSEP14091 401 aa16.27■□□□□ 0.19
PCDHB17P-201ENST00000539533 PCSK2P16519 638 aa16.27■□□□□ 0.19
PCDHB17P-201ENST00000539533 IDUAP35475 653 aa16.27■□□□□ 0.19
PCDHB17P-201ENST00000539533 PPP2R2BQ00005 443 aa16.27■□□□□ 0.19
PCDHB17P-201ENST00000539533 PIGFQ07326 219 aa16.27■□□□□ 0.19
PCDHB17P-201ENST00000539533 NKG7Q16617 165 aa16.27■□□□□ 0.19
PCDHB17P-201ENST00000539533 DPY19L1Q2PZI1 675 aa16.27■□□□□ 0.19
PCDHB17P-201ENST00000539533 PRRT3Q5FWE3 981 aa16.27■□□□□ 0.19
PCDHB17P-201ENST00000539533 KIAA1614Q5VZ46 1190 aa16.27■□□□□ 0.19
PCDHB17P-201ENST00000539533 TAF8Q7Z7C8 310 aa16.27■□□□□ 0.19
PCDHB17P-201ENST00000539533 UBALD2Q8IYN6 164 aa16.27■□□□□ 0.19
PCDHB17P-201ENST00000539533 ADGRF3Q8IZF5 1079 aa16.27■□□□□ 0.19
PCDHB17P-201ENST00000539533 HS3ST5Q8IZT8 346 aa16.27■□□□□ 0.19
PCDHB17P-201ENST00000539533 OR2T12Q8NG77 320 aa16.27■□□□□ 0.19
PCDHB17P-201ENST00000539533 C17orf50Q8WW18 174 aa16.27■□□□□ 0.19
PCDHB17P-201ENST00000539533 DPH7Q9BTV6 452 aa16.27■□□□□ 0.19
PCDHB17P-201ENST00000539533 MS4A8Q9BY19 250 aa16.27■□□□□ 0.19
PCDHB17P-201ENST00000539533 GSDMCQ9BYG8 508 aa16.27■□□□□ 0.19
PCDHB17P-201ENST00000539533 SRMSQ9H3Y6 488 aa16.27■□□□□ 0.19
PCDHB17P-201ENST00000539533 SIRT5Q9NXA8 310 aa16.27■□□□□ 0.19
PCDHB17P-201ENST00000539533 EXO1Q9UQ84 846 aaKnown RBP16.27■□□□□ 0.19
PCDHB17P-201ENST00000539533 PCDHB14Q9Y5E9 798 aa16.27■□□□□ 0.19
PCDHB17P-201ENST00000539533 RTCAO00442 366 aaKnown RBP16.26■□□□□ 0.19
PCDHB17P-201ENST00000539533 YY2O15391 372 aa16.26■□□□□ 0.19
PCDHB17P-201ENST00000539533 PRMT3O60678 531 aa16.26■□□□□ 0.19
PCDHB17P-201ENST00000539533 CST1P01037 141 aa16.26■□□□□ 0.19
PCDHB17P-201ENST00000539533 LAMP1P11279 417 aa16.26■□□□□ 0.19
PCDHB17P-201ENST00000539533 NR4A1P22736 598 aa16.26■□□□□ 0.19
PCDHB17P-201ENST00000539533 CDKN2CP42773 168 aa16.26■□□□□ 0.19
PCDHB17P-201ENST00000539533 WNT3P56703 355 aa16.26■□□□□ 0.19
PCDHB17P-201ENST00000539533 CD47Q08722 323 aa16.26■□□□□ 0.19
PCDHB17P-201ENST00000539533 GPR18Q14330 331 aa16.26■□□□□ 0.19
PCDHB17P-201ENST00000539533 DEPDC1Q5TB30 811 aa16.26■□□□□ 0.19
PCDHB17P-201ENST00000539533 SLC9B2Q86UD5 537 aa16.26■□□□□ 0.19
PCDHB17P-201ENST00000539533 PARGQ86W56 976 aa16.26■□□□□ 0.19
PCDHB17P-201ENST00000539533 GJD3Q8N144 294 aa16.26■□□□□ 0.19
PCDHB17P-201ENST00000539533 CAMKK1Q8N5S9 505 aa16.26■□□□□ 0.19
PCDHB17P-201ENST00000539533 SH3YL1Q96HL8 342 aaPredicted RBP16.26■□□□□ 0.19
PCDHB17P-201ENST00000539533 MIR1-1HGQ9H1L0 117 aa16.26■□□□□ 0.19
PCDHB17P-201ENST00000539533 IKZF5Q9H5V7 419 aa16.26■□□□□ 0.19
PCDHB17P-201ENST00000539533 NT5DC2Q9H857 520 aa16.26■□□□□ 0.19
PCDHB17P-201ENST00000539533 USE1Q9NZ43 259 aa16.26■□□□□ 0.19
PCDHB17P-201ENST00000539533 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.26■□□□□ 0.19
PCDHB17P-201ENST00000539533 ENPP5Q9UJA9 477 aa16.26■□□□□ 0.19
PCDHB17P-201ENST00000539533 BAG5Q9UL15 447 aa16.26■□□□□ 0.19
PCDHB17P-201ENST00000539533 SCAMP2O15127 329 aaKnown RBP16.26■□□□□ 0.19
PCDHB17P-201ENST00000539533 GSTA4O15217 222 aa16.26■□□□□ 0.19
PCDHB17P-201ENST00000539533 AQP9O43315 295 aa16.26■□□□□ 0.19
PCDHB17P-201ENST00000539533 SCN2BO60939 215 aa16.26■□□□□ 0.19
PCDHB17P-201ENST00000539533 STATHP02808 62 aa16.26■□□□□ 0.19
PCDHB17P-201ENST00000539533 ASMTP46597 345 aa16.26■□□□□ 0.19
PCDHB17P-201ENST00000539533 SRSF11Q05519 484 aaKnown RBP16.26■□□□□ 0.19
PCDHB17P-201ENST00000539533 KCNAB2Q13303 367 aa16.26■□□□□ 0.19
PCDHB17P-201ENST00000539533 KHDRBS2Q5VWX1 349 aaKnown RBP16.26■□□□□ 0.19
PCDHB17P-201ENST00000539533 TRIM48Q8IWZ4 208 aa16.26■□□□□ 0.19
PCDHB17P-201ENST00000539533 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.26■□□□□ 0.19
PCDHB17P-201ENST00000539533 KCNH6Q9H252 994 aa16.26■□□□□ 0.19
PCDHB17P-201ENST00000539533 ADGRE2Q9UHX3 823 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms