RNA–Protein interactions for RNA: ENST00000538456.3

SMARCA4-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 3

Gene SMARCA4, Length 738 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-206ENST00000538456 PLA2G16P53816 162 aa12.95□□□□□ -0.34
SMARCA4-206ENST00000538456 FOXO1Q12778 655 aa12.95□□□□□ -0.34
SMARCA4-206ENST00000538456 SLC10A1Q14973 349 aa12.95□□□□□ -0.34
SMARCA4-206ENST00000538456 FLYWCH1Q4VC44 716 aa12.95□□□□□ -0.34
SMARCA4-206ENST00000538456 FBXW10Q5XX13 1052 aa12.95□□□□□ -0.34
SMARCA4-206ENST00000538456 SBSNQ6UWP8 590 aa12.95□□□□□ -0.34
SMARCA4-206ENST00000538456 PAMR1Q6UXH9 720 aa12.95□□□□□ -0.34
SMARCA4-206ENST00000538456 KLHDC8AQ8IYD2 350 aa12.95□□□□□ -0.34
SMARCA4-206ENST00000538456 TMEM132CQ8N3T6 1108 aa12.95□□□□□ -0.34
SMARCA4-206ENST00000538456 SPC24Q8NBT2 197 aa12.95□□□□□ -0.34
SMARCA4-206ENST00000538456 RELL2Q8NC24 303 aaPredicted RBP12.95□□□□□ -0.34
SMARCA4-206ENST00000538456 ANP32BQ92688 251 aaKnown RBP12.95□□□□□ -0.34
SMARCA4-206ENST00000538456 MS4A6EQ96DS6 147 aa12.95□□□□□ -0.34
SMARCA4-206ENST00000538456 TRMT1Q9NXH9 659 aaKnown RBP12.95□□□□□ -0.34
SMARCA4-206ENST00000538456 B4GALT7Q9UBV7 327 aa12.95□□□□□ -0.34
SMARCA4-206ENST00000538456 CBLCQ9ULV8 474 aa12.95□□□□□ -0.34
SMARCA4-206ENST00000538456 KCNE2Q9Y6J6 123 aa12.95□□□□□ -0.34
SMARCA4-206ENST00000538456 JMJD1CQ15652 2540 aa12.95□□□□□ -0.34
SMARCA4-206ENST00000538456 TRGV5A0A0B4J1U4 118 aa12.94□□□□□ -0.34
SMARCA4-206ENST00000538456 FAM47E-STBD1D6RA91 191 aa12.94□□□□□ -0.34
SMARCA4-206ENST00000538456 BANF1O75531 89 aa12.94□□□□□ -0.34
SMARCA4-206ENST00000538456 AHSGP02765 367 aa12.94□□□□□ -0.34
SMARCA4-206ENST00000538456 ENO2P09104 434 aaPredicted RBP12.94□□□□□ -0.34
SMARCA4-206ENST00000538456 CCDC175P0C221 793 aa12.94□□□□□ -0.34
SMARCA4-206ENST00000538456 PGAM1P18669 254 aa12.94□□□□□ -0.34
SMARCA4-206ENST00000538456 CERS1P27544 350 aa12.94□□□□□ -0.34
SMARCA4-206ENST00000538456 PIGAP37287 484 aa12.94□□□□□ -0.34
SMARCA4-206ENST00000538456 WNT3P56703 355 aa12.94□□□□□ -0.34
SMARCA4-206ENST00000538456 RNF4P78317 190 aa12.94□□□□□ -0.34
SMARCA4-206ENST00000538456 RIPPLY2Q5TAB7 128 aa12.94□□□□□ -0.34
SMARCA4-206ENST00000538456 BIVMQ86UB2 503 aa12.94□□□□□ -0.34
SMARCA4-206ENST00000538456 ZNF595Q8IYB9 648 aa12.94□□□□□ -0.34
SMARCA4-206ENST00000538456 GOLM1Q8NBJ4 401 aa12.94□□□□□ -0.34
SMARCA4-206ENST00000538456 PTPMT1Q8WUK0 201 aaPredicted RBP12.94□□□□□ -0.34
SMARCA4-206ENST00000538456 DAZLQ92904 295 aaKnown RBP12.94□□□□□ -0.34
SMARCA4-206ENST00000538456 MBD6Q96DN6 1003 aa12.94□□□□□ -0.34
SMARCA4-206ENST00000538456 CAPZA3Q96KX2 299 aa12.94□□□□□ -0.34
SMARCA4-206ENST00000538456 SGCZQ96LD1 299 aa12.94□□□□□ -0.34
SMARCA4-206ENST00000538456 NPLQ9BXD5 320 aaPredicted RBP12.94□□□□□ -0.34
SMARCA4-206ENST00000538456 LZTFL1Q9NQ48 299 aa12.94□□□□□ -0.34
SMARCA4-206ENST00000538456 ATG4BQ9Y4P1 393 aa12.94□□□□□ -0.34
SMARCA4-206ENST00000538456 NINQ8N4C6 2090 aa12.93□□□□□ -0.34
SMARCA4-206ENST00000538456 A0A088AWK7 358 aa12.93□□□□□ -0.34
SMARCA4-206ENST00000538456 LRIT2A6NDA9 550 aa12.93□□□□□ -0.34
SMARCA4-206ENST00000538456 NPEPPSL1A6NEC2 478 aa12.93□□□□□ -0.34
SMARCA4-206ENST00000538456 C17orf105B2RV13 164 aa12.93□□□□□ -0.34
SMARCA4-206ENST00000538456 SYT5O00445 386 aa12.93□□□□□ -0.34
SMARCA4-206ENST00000538456 RAF1P04049 648 aa12.93□□□□□ -0.34
SMARCA4-206ENST00000538456 GABRA1P14867 456 aa12.93□□□□□ -0.34
SMARCA4-206ENST00000538456 TNNI3P19429 210 aa12.93□□□□□ -0.34
SMARCA4-206ENST00000538456 ZNF10P21506 573 aaPredicted RBP12.93□□□□□ -0.34
SMARCA4-206ENST00000538456 TACR1P25103 407 aa12.93□□□□□ -0.34
SMARCA4-206ENST00000538456 PEX19P40855 299 aa12.93□□□□□ -0.34
SMARCA4-206ENST00000538456 LIM2P55344 173 aa12.93□□□□□ -0.34
SMARCA4-206ENST00000538456 STX4Q12846 297 aa12.93□□□□□ -0.34
SMARCA4-206ENST00000538456 KEAP1Q14145 624 aa12.93□□□□□ -0.34
SMARCA4-206ENST00000538456 SLBPQ14493 270 aaKnown RBP eCLIP12.93□□□□□ -0.34
SMARCA4-206ENST00000538456 PPP1R3AQ16821 1122 aa12.93□□□□□ -0.34
SMARCA4-206ENST00000538456 HYAL4Q2M3T9 481 aa12.93□□□□□ -0.34
SMARCA4-206ENST00000538456 DEFB113Q30KQ7 82 aa12.93□□□□□ -0.34
SMARCA4-206ENST00000538456 OPN5Q6U736 354 aa12.93□□□□□ -0.34
SMARCA4-206ENST00000538456 SEM1Q6ZVN7 128 aa12.93□□□□□ -0.34
SMARCA4-206ENST00000538456 TAOK1Q7L7X3 1001 aa12.93□□□□□ -0.34
SMARCA4-206ENST00000538456 CAMKMTQ7Z624 323 aa12.93□□□□□ -0.34
SMARCA4-206ENST00000538456 NAT8LQ8N9F0 302 aa12.93□□□□□ -0.34
SMARCA4-206ENST00000538456 NAXEQ8NCW5 288 aa12.93□□□□□ -0.34
SMARCA4-206ENST00000538456 MORN4Q8NDC4 146 aa12.93□□□□□ -0.34
SMARCA4-206ENST00000538456 OR14A16Q8NHC5 309 aa12.93□□□□□ -0.34
SMARCA4-206ENST00000538456 GABPB2Q8TAK5 448 aaPredicted RBP12.93□□□□□ -0.34
SMARCA4-206ENST00000538456 SLC2A12Q8TD20 617 aa12.93□□□□□ -0.34
SMARCA4-206ENST00000538456 FAM222BQ8WU58 562 aa12.93□□□□□ -0.34
SMARCA4-206ENST00000538456 MAGOHBQ96A72 148 aaKnown RBP12.93□□□□□ -0.34
SMARCA4-206ENST00000538456 RUNDC3BQ96NL0 473 aa12.93□□□□□ -0.34
SMARCA4-206ENST00000538456 EGFL8Q99944 293 aa12.93□□□□□ -0.34
SMARCA4-206ENST00000538456 SH3GL2Q99962 352 aa12.93□□□□□ -0.34
SMARCA4-206ENST00000538456 ALOXE3Q9BYJ1 711 aa12.93□□□□□ -0.34
SMARCA4-206ENST00000538456 SLC6A15Q9H2J7 730 aa12.93□□□□□ -0.34
SMARCA4-206ENST00000538456 ZNF703Q9H7S9 590 aaPredicted RBP12.93□□□□□ -0.34
SMARCA4-206ENST00000538456 PPANQ9NQ55 473 aaKnown RBP12.93□□□□□ -0.34
SMARCA4-206ENST00000538456 FN1P02751 2386 aaKnown RBP12.92□□□□□ -0.34
SMARCA4-206ENST00000538456 HSPB2A8KAH6 182 aa12.92□□□□□ -0.34
SMARCA4-206ENST00000538456 CDC7O00311 574 aa12.92□□□□□ -0.34
SMARCA4-206ENST00000538456 CYR61O00622 381 aa12.92□□□□□ -0.34
SMARCA4-206ENST00000538456 HCN1O60741 890 aa12.92□□□□□ -0.34
SMARCA4-206ENST00000538456 LDB3O75112 727 aa12.92□□□□□ -0.34
SMARCA4-206ENST00000538456 WDR47O94967 919 aa12.92□□□□□ -0.34
SMARCA4-206ENST00000538456 ATE1O95260 518 aa12.92□□□□□ -0.34
SMARCA4-206ENST00000538456 RFPL3SP0C7P2 107 aa12.92□□□□□ -0.34
SMARCA4-206ENST00000538456 ADSLP30566 484 aaPredicted RBP12.92□□□□□ -0.34
SMARCA4-206ENST00000538456 GDF5P43026 501 aa12.92□□□□□ -0.34
SMARCA4-206ENST00000538456 TRPC1P48995 793 aa12.92□□□□□ -0.34
SMARCA4-206ENST00000538456 ASCL1P50553 236 aa12.92□□□□□ -0.34
SMARCA4-206ENST00000538456 KCNJ2P63252 427 aa12.92□□□□□ -0.34
SMARCA4-206ENST00000538456 ID2Q02363 134 aa12.92□□□□□ -0.34
SMARCA4-206ENST00000538456 ASPHQ12797 758 aa12.92□□□□□ -0.34
SMARCA4-206ENST00000538456 HSPB2Q16082 182 aa12.92□□□□□ -0.34
SMARCA4-206ENST00000538456 C18orf21Q32NC0 220 aaPredicted RBP12.92□□□□□ -0.34
SMARCA4-206ENST00000538456 BBS9Q3SYG4 887 aa12.92□□□□□ -0.34
SMARCA4-206ENST00000538456 PRAMEF20Q5VT98 475 aa12.92□□□□□ -0.34
SMARCA4-206ENST00000538456 ADNP2Q6IQ32 1131 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms