RNA–Protein interactions for RNA: ENST00000538291.5

SCARB1-205, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 5,527 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-205ENST00000538291 PPM1BO75688 479 aa16.16■□□□□ 0.18
SCARB1-205ENST00000538291 AOC1P19801 751 aa16.16■□□□□ 0.18
SCARB1-205ENST00000538291 TIA1P31483 386 aaKnown RBP eCLIP16.16■□□□□ 0.18
SCARB1-205ENST00000538291 MEDAGQ5VYS4 303 aa16.16■□□□□ 0.18
SCARB1-205ENST00000538291 C3orf33Q6P1S2 294 aa16.16■□□□□ 0.18
SCARB1-205ENST00000538291 UNQ6126/PRO20091Q6UXV3 157 aa16.16■□□□□ 0.18
SCARB1-205ENST00000538291 SLC39A5Q6ZMH5 540 aa16.16■□□□□ 0.18
SCARB1-205ENST00000538291 TMPRSS11EQ9UL52 423 aa16.16■□□□□ 0.18
SCARB1-205ENST00000538291 OR12D1P0DN82 309 aa16.16■□□□□ 0.18
SCARB1-205ENST00000538291 LBX1P52954 281 aa16.16■□□□□ 0.18
SCARB1-205ENST00000538291 DNASE1L3Q13609 305 aa16.16■□□□□ 0.18
SCARB1-205ENST00000538291 FBXO46Q6PJ61 603 aaPredicted RBP16.16■□□□□ 0.18
SCARB1-205ENST00000538291 ZSWIM9Q86XI8 627 aa16.16■□□□□ 0.18
SCARB1-205ENST00000538291 ZNF100Q8IYN0 542 aa16.16■□□□□ 0.18
SCARB1-205ENST00000538291 SLC7A11Q9UPY5 501 aa16.16■□□□□ 0.18
SCARB1-205ENST00000538291 CDRT1O95170 752 aa16.16■□□□□ 0.18
SCARB1-205ENST00000538291 H2BFMP0C1H6 154 aa16.16■□□□□ 0.18
SCARB1-205ENST00000538291 LEPRP48357 1165 aaKnown RBP16.16■□□□□ 0.18
SCARB1-205ENST00000538291 RHDQ02161 417 aa16.16■□□□□ 0.18
SCARB1-205ENST00000538291 C6orf136Q5SQH8 315 aa16.16■□□□□ 0.18
SCARB1-205ENST00000538291 NCEH1Q6PIU2 408 aa16.16■□□□□ 0.18
SCARB1-205ENST00000538291 ERMP1Q7Z2K6 904 aa16.16■□□□□ 0.18
SCARB1-205ENST00000538291 LRRC25Q8N386 305 aaPredicted RBP16.16■□□□□ 0.18
SCARB1-205ENST00000538291 ZNF689Q96CS4 500 aaPredicted RBP16.16■□□□□ 0.18
SCARB1-205ENST00000538291 NAA11Q9BSU3 229 aaPredicted RBP16.16■□□□□ 0.18
SCARB1-205ENST00000538291 FUZQ9BT04 418 aa16.16■□□□□ 0.18
SCARB1-205ENST00000538291 ZNF700Q9H0M5 742 aa16.16■□□□□ 0.18
SCARB1-205ENST00000538291 VNN3Q9NY84 501 aa16.16■□□□□ 0.18
SCARB1-205ENST00000538291 PGCP20142 388 aa16.16■□□□□ 0.18
SCARB1-205ENST00000538291 CD72P21854 359 aa16.16■□□□□ 0.18
SCARB1-205ENST00000538291 GLT8D1Q68CQ7 371 aa16.16■□□□□ 0.18
SCARB1-205ENST00000538291 MAMDC4Q6UXC1 1216 aa16.16■□□□□ 0.18
SCARB1-205ENST00000538291 TTLL10Q6ZVT0 673 aa16.16■□□□□ 0.18
SCARB1-205ENST00000538291 JPH3Q8WXH2 748 aaPredicted RBP16.16■□□□□ 0.18
SCARB1-205ENST00000538291 DMRTB1Q96MA1 342 aa16.16■□□□□ 0.18
SCARB1-205ENST00000538291 DNAJC27Q9NZQ0 273 aa16.16■□□□□ 0.18
SCARB1-205ENST00000538291 SSX6Q7RTT6 188 aa16.15■□□□□ 0.18
SCARB1-205ENST00000538291 CARM1Q86X55 608 aa16.15■□□□□ 0.18
SCARB1-205ENST00000538291 ALG5Q9Y673 324 aa16.15■□□□□ 0.18
SCARB1-205ENST00000538291 NFAT5O94916 1531 aa16.15■□□□□ 0.18
SCARB1-205ENST00000538291 ST3GAL4Q11206 333 aa16.15■□□□□ 0.18
SCARB1-205ENST00000538291 OR52E8Q6IFG1 317 aa16.15■□□□□ 0.18
SCARB1-205ENST00000538291 USP53Q70EK8 1073 aa16.15■□□□□ 0.18
SCARB1-205ENST00000538291 OR10T2Q8NGX3 314 aa16.15■□□□□ 0.18
SCARB1-205ENST00000538291 GRPEL2Q8TAA5 225 aa16.15■□□□□ 0.18
SCARB1-205ENST00000538291 ADAMTS18Q8TE60 1221 aa16.15■□□□□ 0.18
SCARB1-205ENST00000538291 HSPA12BQ96MM6 686 aa16.15■□□□□ 0.18
SCARB1-205ENST00000538291 BARD1Q99728 777 aaKnown RBP16.15■□□□□ 0.18
SCARB1-205ENST00000538291 IRF2BPLQ9H1B7 796 aa16.15■□□□□ 0.18
SCARB1-205ENST00000538291 ZNF395Q9H8N7 513 aaPredicted RBP16.15■□□□□ 0.18
SCARB1-205ENST00000538291 MEAF6Q9HAF1 191 aa16.15■□□□□ 0.18
SCARB1-205ENST00000538291 HRGP04196 525 aa16.15■□□□□ 0.18
SCARB1-205ENST00000538291 ZNF35P13682 527 aa16.15■□□□□ 0.18
SCARB1-205ENST00000538291 GPR143P51810 404 aa16.15■□□□□ 0.18
SCARB1-205ENST00000538291 TBPL1P62380 186 aa16.15■□□□□ 0.18
SCARB1-205ENST00000538291 MLLT1Q03111 559 aaPredicted RBP16.15■□□□□ 0.18
SCARB1-205ENST00000538291 ECH1Q13011 328 aa16.15■□□□□ 0.18
SCARB1-205ENST00000538291 EMC10Q5UCC4 262 aa16.15■□□□□ 0.18
SCARB1-205ENST00000538291 RAET1LQ5VY80 246 aa16.15■□□□□ 0.18
SCARB1-205ENST00000538291 LRRC69Q6ZNQ3 347 aa16.15■□□□□ 0.18
SCARB1-205ENST00000538291 TMED4Q7Z7H5 227 aa16.15■□□□□ 0.18
SCARB1-205ENST00000538291 PHTF2Q8N3S3 785 aa16.15■□□□□ 0.18
SCARB1-205ENST00000538291 TSPEARQ8WU66 669 aa16.15■□□□□ 0.18
SCARB1-205ENST00000538291 AURKBQ96GD4 344 aaPredicted RBP16.15■□□□□ 0.18
SCARB1-205ENST00000538291 OR10A4Q9H209 315 aa16.15■□□□□ 0.18
SCARB1-205ENST00000538291 HSD3B7Q9H2F3 369 aa16.15■□□□□ 0.18
SCARB1-205ENST00000538291 ADAMTS10Q9H324 1103 aa16.15■□□□□ 0.18
SCARB1-205ENST00000538291 BHMG1C9JSJ3 638 aaPredicted RBP16.15■□□□□ 0.18
SCARB1-205ENST00000538291 C6P13671 934 aa16.15■□□□□ 0.18
SCARB1-205ENST00000538291 TUBA1BP68363 451 aa16.15■□□□□ 0.18
SCARB1-205ENST00000538291 TUBA4AP68366 448 aa16.15■□□□□ 0.18
SCARB1-205ENST00000538291 FADDQ13158 208 aa16.15■□□□□ 0.18
SCARB1-205ENST00000538291 ZBED5Q49AG3 693 aa16.15■□□□□ 0.18
SCARB1-205ENST00000538291 RPL13AP3Q6NVV1 102 aa16.15■□□□□ 0.18
SCARB1-205ENST00000538291 BEND4Q6ZU67 534 aa16.15■□□□□ 0.18
SCARB1-205ENST00000538291 TUBA1AQ71U36 451 aa16.15■□□□□ 0.18
SCARB1-205ENST00000538291 TAMM41Q96BW9 452 aa16.15■□□□□ 0.18
SCARB1-205ENST00000538291 C1orf21Q9H246 121 aa16.15■□□□□ 0.18
SCARB1-205ENST00000538291 MOV10Q9HCE1 1003 aaKnown RBP16.15■□□□□ 0.18
SCARB1-205ENST00000538291 ERVK-18Q9QC07 812 aa16.15■□□□□ 0.18
SCARB1-205ENST00000538291 SCP2D1Q9UJQ7 156 aa16.15■□□□□ 0.18
SCARB1-205ENST00000538291 NOP16Q9Y3C1 178 aaKnown RBP16.15■□□□□ 0.18
SCARB1-205ENST00000538291 ACADVLP49748 655 aa16.14■□□□□ 0.18
SCARB1-205ENST00000538291 SOX4Q06945 474 aaPredicted RBP16.14■□□□□ 0.18
SCARB1-205ENST00000538291 LRP8Q14114 963 aa16.14■□□□□ 0.18
SCARB1-205ENST00000538291 GINS1Q14691 196 aa16.14■□□□□ 0.18
SCARB1-205ENST00000538291 SHQ1Q6PI26 577 aaKnown RBP16.14■□□□□ 0.18
SCARB1-205ENST00000538291 MRGPRX2Q96LB1 330 aa16.14■□□□□ 0.18
SCARB1-205ENST00000538291 GMLQ99445 158 aa16.14■□□□□ 0.18
SCARB1-205ENST00000538291 EHD1Q9H4M9 534 aa16.14■□□□□ 0.18
SCARB1-205ENST00000538291 GIMAP2Q9UG22 337 aa16.14■□□□□ 0.18
SCARB1-205ENST00000538291 LOC100509620A0A075B734 347 aa16.14■□□□□ 0.17
SCARB1-205ENST00000538291 A0A1B0GVC2 190 aa16.14■□□□□ 0.17
SCARB1-205ENST00000538291 SH3D21A4FU49 640 aa16.14■□□□□ 0.17
SCARB1-205ENST00000538291 FAM227AF5H4B4 570 aa16.14■□□□□ 0.17
SCARB1-205ENST00000538291 FAM72CH0Y354 149 aa16.14■□□□□ 0.17
SCARB1-205ENST00000538291 FLRT2O43155 660 aa16.14■□□□□ 0.17
SCARB1-205ENST00000538291 RFPL2O75678 378 aa16.14■□□□□ 0.17
SCARB1-205ENST00000538291 GBX1Q14549 363 aa16.14■□□□□ 0.17
SCARB1-205ENST00000538291 ZNF542PQ5EBM4 170 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms