RNA–Protein interactions for RNA: ENST00000536274.5

MCF2-210, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-210ENST00000536274 ITGB5P18084 799 aa3.57□□□□□ -1.84
MCF2-210ENST00000536274 LHCGRP22888 699 aa3.57□□□□□ -1.84
MCF2-210ENST00000536274 CNTFP26441 200 aa3.57□□□□□ -1.84
MCF2-210ENST00000536274 ADH6P28332 368 aa3.57□□□□□ -1.84
MCF2-210ENST00000536274 AVPR1BP47901 424 aa3.57□□□□□ -1.84
MCF2-210ENST00000536274 GNG10P50151 68 aa3.57□□□□□ -1.84
MCF2-210ENST00000536274 TAS2R39P59534 338 aa3.57□□□□□ -1.84
MCF2-210ENST00000536274 DCDC1P59894 354 aa3.57□□□□□ -1.84
MCF2-210ENST00000536274 RNF4P78317 190 aa3.57□□□□□ -1.84
MCF2-210ENST00000536274 SNTB1Q13884 538 aaKnown RBP3.57□□□□□ -1.84
MCF2-210ENST00000536274 IL18Q14116 193 aa3.57□□□□□ -1.84
MCF2-210ENST00000536274 MBTPS1Q14703 1052 aa3.57□□□□□ -1.84
MCF2-210ENST00000536274 GLYR1Q49A26 553 aaPredicted RBP3.57□□□□□ -1.84
MCF2-210ENST00000536274 SBK1Q52WX2 424 aa3.57□□□□□ -1.84
MCF2-210ENST00000536274 LRRC38Q5VT99 294 aa3.57□□□□□ -1.84
MCF2-210ENST00000536274 SLC27A4Q6P1M0 643 aa3.57□□□□□ -1.84
MCF2-210ENST00000536274 AFTPHQ6ULP2 937 aa3.57□□□□□ -1.84
MCF2-210ENST00000536274 IL20RBQ6UXL0 311 aa3.57□□□□□ -1.84
MCF2-210ENST00000536274 ETV3LQ6ZN32 361 aa3.57□□□□□ -1.84
MCF2-210ENST00000536274 RTL10Q7L3V2 364 aa3.57□□□□□ -1.84
MCF2-210ENST00000536274 KCNMB4Q86W47 210 aa3.57□□□□□ -1.84
MCF2-210ENST00000536274 C12orf40Q86WS4 652 aa3.57□□□□□ -1.84
MCF2-210ENST00000536274 STX12Q86Y82 276 aa3.57□□□□□ -1.84
MCF2-210ENST00000536274 TGIF2LXQ8IUE1 241 aa3.57□□□□□ -1.84
MCF2-210ENST00000536274 CMIPQ8IY22 773 aa3.57□□□□□ -1.84
MCF2-210ENST00000536274 C19orf18Q8NEA5 215 aa3.57□□□□□ -1.84
MCF2-210ENST00000536274 CCDC54Q8NEL0 328 aa3.57□□□□□ -1.84
MCF2-210ENST00000536274 MCPH1Q8NEM0 835 aa3.57□□□□□ -1.84
MCF2-210ENST00000536274 GPRC5AQ8NFJ5 357 aa3.57□□□□□ -1.84
MCF2-210ENST00000536274 IPMKQ8NFU5 416 aa3.57□□□□□ -1.84
MCF2-210ENST00000536274 OR2T4Q8NH00 348 aa3.57□□□□□ -1.84
MCF2-210ENST00000536274 NETO1Q8TDF5 533 aa3.57□□□□□ -1.84
MCF2-210ENST00000536274 CNOT9Q92600 299 aaKnown RBP3.57□□□□□ -1.84
MCF2-210ENST00000536274 FAM162AQ96A26 154 aa3.57□□□□□ -1.84
MCF2-210ENST00000536274 COL26A1Q96A83 441 aa3.57□□□□□ -1.84
MCF2-210ENST00000536274 RAB7BQ96AH8 199 aa3.57□□□□□ -1.84
MCF2-210ENST00000536274 ROPN1LQ96C74 230 aa3.57□□□□□ -1.84
MCF2-210ENST00000536274 SLC2A13Q96QE2 648 aa3.57□□□□□ -1.84
MCF2-210ENST00000536274 CPNE1Q99829 537 aa3.57□□□□□ -1.84
MCF2-210ENST00000536274 HOPXQ9BPY8 73 aaPredicted RBP3.57□□□□□ -1.84
MCF2-210ENST00000536274 SOX7Q9BT81 388 aa3.57□□□□□ -1.84
MCF2-210ENST00000536274 THUMPD3Q9BV44 507 aaKnown RBP3.57□□□□□ -1.84
MCF2-210ENST00000536274 HAPLN2Q9GZV7 340 aa3.57□□□□□ -1.84
MCF2-210ENST00000536274 ATXN3LQ9H3M9 355 aa3.57□□□□□ -1.84
MCF2-210ENST00000536274 ALG9Q9H6U8 611 aa3.57□□□□□ -1.84
MCF2-210ENST00000536274 SLC6A13Q9NSD5 602 aa3.57□□□□□ -1.84
MCF2-210ENST00000536274 NRBP2Q9NSY0 501 aa3.57□□□□□ -1.84
MCF2-210ENST00000536274 NUDT15Q9NV35 164 aa3.57□□□□□ -1.84
MCF2-210ENST00000536274 PDP1Q9P0J1 537 aaPredicted RBP3.57□□□□□ -1.84
MCF2-210ENST00000536274 SEC14L4Q9UDX3 406 aa3.57□□□□□ -1.84
MCF2-210ENST00000536274 SLC2A6Q9UGQ3 507 aa3.57□□□□□ -1.84
MCF2-210ENST00000536274 CLEC4AQ9UMR7 237 aa3.57□□□□□ -1.84
MCF2-210ENST00000536274 NOD1Q9Y239 953 aa3.57□□□□□ -1.84
MCF2-210ENST00000536274 NCKAP1Q9Y2A7 1128 aa3.57□□□□□ -1.84
MCF2-210ENST00000536274 CMAHPQ9Y471 501 aa3.57□□□□□ -1.84
MCF2-210ENST00000536274 FKBP7Q9Y680 259 aa3.57□□□□□ -1.84
MCF2-210ENST00000536274 SIP14410 1827 aa3.57□□□□□ -1.84
MCF2-210ENST00000536274 ZCWPW2A0A1B0GU75 182 aa3.56□□□□□ -1.84
MCF2-210ENST00000536274 OR6C74A6NCV1 312 aa3.56□□□□□ -1.84
MCF2-210ENST00000536274 NCF1BA6NI72 391 aaPredicted RBP3.56□□□□□ -1.84
MCF2-210ENST00000536274 NCF1CA8MVU1 366 aaPredicted RBP3.56□□□□□ -1.84
MCF2-210ENST00000536274 K7ERI5 159 aa3.56□□□□□ -1.84
MCF2-210ENST00000536274 UBXN8O00124 270 aa3.56□□□□□ -1.84
MCF2-210ENST00000536274 DVL2O14641 736 aa3.56□□□□□ -1.84
MCF2-210ENST00000536274 ULK1O75385 1050 aa3.56□□□□□ -1.84
MCF2-210ENST00000536274 SNAPINO95295 136 aa3.56□□□□□ -1.84
MCF2-210ENST00000536274 SERPINA1P01009 418 aa3.56□□□□□ -1.84
MCF2-210ENST00000536274 PIGRP01833 764 aa3.56□□□□□ -1.84
MCF2-210ENST00000536274 ANXA6P08133 673 aa3.56□□□□□ -1.84
MCF2-210ENST00000536274 ADRB1P08588 477 aa3.56□□□□□ -1.84
MCF2-210ENST00000536274 NCF1P14598 390 aaPredicted RBP3.56□□□□□ -1.84
MCF2-210ENST00000536274 PGAM1P18669 254 aa3.56□□□□□ -1.84
MCF2-210ENST00000536274 CXCL2P19875 107 aa3.56□□□□□ -1.84
MCF2-210ENST00000536274 TNFRSF1BP20333 461 aa3.56□□□□□ -1.84
MCF2-210ENST00000536274 DRD5P21918 477 aa3.56□□□□□ -1.84
MCF2-210ENST00000536274 RYKP34925 604 aa3.56□□□□□ -1.84
MCF2-210ENST00000536274 PTPN7P35236 360 aa3.56□□□□□ -1.84
MCF2-210ENST00000536274 GSTM5P46439 218 aa3.56□□□□□ -1.84
MCF2-210ENST00000536274 ZFP36L2P47974 494 aaKnown RBP3.56□□□□□ -1.84
MCF2-210ENST00000536274 CCL23P55773 120 aa3.56□□□□□ -1.84
MCF2-210ENST00000536274 BACE1P56817 501 aa3.56□□□□□ -1.84
MCF2-210ENST00000536274 MC2RQ01718 297 aa3.56□□□□□ -1.84
MCF2-210ENST00000536274 BAMBIQ13145 260 aa3.56□□□□□ -1.84
MCF2-210ENST00000536274 PUM1Q14671 1186 aaKnown RBP eCLIP3.56□□□□□ -1.84
MCF2-210ENST00000536274 SSX2Q16385 188 aa3.56□□□□□ -1.84
MCF2-210ENST00000536274 PFKFB4Q16877 469 aa3.56□□□□□ -1.84
MCF2-210ENST00000536274 MICAQ29983 383 aa3.56□□□□□ -1.84
MCF2-210ENST00000536274 ZNF792Q3KQV3 632 aa3.56□□□□□ -1.84
MCF2-210ENST00000536274 NOMO2Q5JPE7 1267 aa3.56□□□□□ -1.84
MCF2-210ENST00000536274 GCNT6Q5T4J0 391 aa3.56□□□□□ -1.84
MCF2-210ENST00000536274 DDI2Q5TDH0 399 aa3.56□□□□□ -1.84
MCF2-210ENST00000536274 LCN1P1Q5VSP4 162 aa3.56□□□□□ -1.84
MCF2-210ENST00000536274 FAM171A1Q5VUB5 890 aa3.56□□□□□ -1.84
MCF2-210ENST00000536274 TRIQKQ629K1 86 aa3.56□□□□□ -1.84
MCF2-210ENST00000536274 TIGD3Q6B0B8 471 aa3.56□□□□□ -1.84
MCF2-210ENST00000536274 C22orf42Q6IC83 251 aa3.56□□□□□ -1.84
MCF2-210ENST00000536274 PSRC1Q6PGN9 363 aaPredicted RBP3.56□□□□□ -1.84
MCF2-210ENST00000536274 HAGHLQ6PII5 290 aaPredicted RBP3.56□□□□□ -1.84
MCF2-210ENST00000536274 C16orf54Q6UWD8 224 aa3.56□□□□□ -1.84
MCF2-210ENST00000536274 SEZ6L2Q6UXD5 910 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms