RNA–Protein interactions for RNA: ENST00000536218.5

LIG1-203, Transcript of DNA ligase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIG1, Length 3,179 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-203ENST00000536218 MYO9BQ13459 2157 aa13.39□□□□□ -0.27
LIG1-203ENST00000536218 LINC00271P0C7V0 271 aa13.38□□□□□ -0.27
LIG1-203ENST00000536218 GPC1P35052 558 aa13.38□□□□□ -0.27
LIG1-203ENST00000536218 IRS1P35568 1242 aa13.38□□□□□ -0.27
LIG1-203ENST00000536218 TPMTP51580 245 aa13.38□□□□□ -0.27
LIG1-203ENST00000536218 PTPN5P54829 565 aa13.38□□□□□ -0.27
LIG1-203ENST00000536218 RAB14P61106 215 aa13.38□□□□□ -0.27
LIG1-203ENST00000536218 ERVK-21P61565 698 aa13.38□□□□□ -0.27
LIG1-203ENST00000536218 ZNF284Q2VY69 593 aa13.38□□□□□ -0.27
LIG1-203ENST00000536218 SPDYE7PQ495Y7 208 aa13.38□□□□□ -0.27
LIG1-203ENST00000536218 LY6G5CQ5SRR4 150 aa13.38□□□□□ -0.27
LIG1-203ENST00000536218 C22orf39Q6P5X5 142 aa13.38□□□□□ -0.27
LIG1-203ENST00000536218 SHQ1Q6PI26 577 aaKnown RBP13.38□□□□□ -0.27
LIG1-203ENST00000536218 CERS6Q6ZMG9 384 aa13.38□□□□□ -0.27
LIG1-203ENST00000536218 MBOAT1Q6ZNC8 495 aa13.38□□□□□ -0.27
LIG1-203ENST00000536218 GPRIN3Q6ZVF9 776 aa13.38□□□□□ -0.27
LIG1-203ENST00000536218 CHMP1BQ7LBR1 199 aa13.38□□□□□ -0.27
LIG1-203ENST00000536218 METTL3Q86U44 580 aaKnown RBP13.38□□□□□ -0.27
LIG1-203ENST00000536218 METTL6Q8TCB7 284 aa13.38□□□□□ -0.27
LIG1-203ENST00000536218 ASB12Q8WXK4 309 aa13.38□□□□□ -0.27
LIG1-203ENST00000536218 GGHQ92820 318 aa13.38□□□□□ -0.27
LIG1-203ENST00000536218 HRH3Q9Y5N1 445 aa13.38□□□□□ -0.27
LIG1-203ENST00000536218 KIAA0355O15063 1070 aa13.38□□□□□ -0.27
LIG1-203ENST00000536218 SEC22BO75396 215 aa13.38□□□□□ -0.27
LIG1-203ENST00000536218 CREG1O75629 220 aa13.38□□□□□ -0.27
LIG1-203ENST00000536218 RHOP08100 348 aa13.38□□□□□ -0.27
LIG1-203ENST00000536218 TYRP14679 529 aa13.38□□□□□ -0.27
LIG1-203ENST00000536218 EPCAMP16422 314 aa13.38□□□□□ -0.27
LIG1-203ENST00000536218 POU1F1P28069 291 aa13.38□□□□□ -0.27
LIG1-203ENST00000536218 SSTR2P30874 369 aa13.38□□□□□ -0.27
LIG1-203ENST00000536218 SPAM1P38567 509 aa13.38□□□□□ -0.27
LIG1-203ENST00000536218 ERVPABLB-1P60509 514 aa13.38□□□□□ -0.27
LIG1-203ENST00000536218 SGO1Q5FBB7 561 aa13.38□□□□□ -0.27
LIG1-203ENST00000536218 TOR1AIP1Q5JTV8 583 aa13.38□□□□□ -0.27
LIG1-203ENST00000536218 ZFAND4Q86XD8 727 aa13.38□□□□□ -0.27
LIG1-203ENST00000536218 TAGAPQ8N103 731 aa13.38□□□□□ -0.27
LIG1-203ENST00000536218 ZNF548Q8NEK5 533 aaPredicted RBP13.38□□□□□ -0.27
LIG1-203ENST00000536218 ZSWIM3Q96MP5 696 aa13.38□□□□□ -0.27
LIG1-203ENST00000536218 OR5M11Q96RB7 305 aa13.38□□□□□ -0.27
LIG1-203ENST00000536218 TDP1Q9NUW8 608 aa13.38□□□□□ -0.27
LIG1-203ENST00000536218 ELF5Q9UKW6 265 aaPredicted RBP13.38□□□□□ -0.27
LIG1-203ENST00000536218 SAMHD1Q9Y3Z3 626 aaKnown RBP13.38□□□□□ -0.27
LIG1-203ENST00000536218 ZNF98A6NK75 572 aa13.38□□□□□ -0.27
LIG1-203ENST00000536218 M0R129 80 aa13.38□□□□□ -0.27
LIG1-203ENST00000536218 E2F3O00716 465 aa13.38□□□□□ -0.27
LIG1-203ENST00000536218 PSMA3P25788 255 aa13.38□□□□□ -0.27
LIG1-203ENST00000536218 ST3GAL4Q11206 333 aa13.38□□□□□ -0.27
LIG1-203ENST00000536218 AADATQ8N5Z0 425 aa13.38□□□□□ -0.27
LIG1-203ENST00000536218 GDPD1Q8N9F7 314 aa13.38□□□□□ -0.27
LIG1-203ENST00000536218 C19orf18Q8NEA5 215 aa13.38□□□□□ -0.27
LIG1-203ENST00000536218 OR2T11Q8NH01 316 aa13.38□□□□□ -0.27
LIG1-203ENST00000536218 QRFPRQ96P65 431 aa13.38□□□□□ -0.27
LIG1-203ENST00000536218 BARHL1Q9BZE3 327 aa13.38□□□□□ -0.27
LIG1-203ENST00000536218 SLC25A13Q9UJS0 675 aa13.38□□□□□ -0.27
LIG1-203ENST00000536218 PCDHB1Q9Y5F3 818 aa13.38□□□□□ -0.27
LIG1-203ENST00000536218 FFAR3O14843 346 aa13.37□□□□□ -0.27
LIG1-203ENST00000536218 GPR42O15529 346 aa13.37□□□□□ -0.27
LIG1-203ENST00000536218 FFAR2O15552 330 aa13.37□□□□□ -0.27
LIG1-203ENST00000536218 VPS4BO75351 444 aa13.37□□□□□ -0.27
LIG1-203ENST00000536218 ZNF254O75437 659 aa13.37□□□□□ -0.27
LIG1-203ENST00000536218 G6PDP11413 515 aa13.37□□□□□ -0.27
LIG1-203ENST00000536218 LHCGRP22888 699 aa13.37□□□□□ -0.27
LIG1-203ENST00000536218 ACRV1P26436 265 aa13.37□□□□□ -0.27
LIG1-203ENST00000536218 HOXA9P31269 272 aa13.37□□□□□ -0.27
LIG1-203ENST00000536218 HTR6P50406 440 aa13.37□□□□□ -0.27
LIG1-203ENST00000536218 ABATP80404 500 aa13.37□□□□□ -0.27
LIG1-203ENST00000536218 PWP1Q13610 501 aa13.37□□□□□ -0.27
LIG1-203ENST00000536218 GTDC1Q4AE62 458 aa13.37□□□□□ -0.27
LIG1-203ENST00000536218 ATP13A5Q4VNC0 1218 aa13.37□□□□□ -0.27
LIG1-203ENST00000536218 MPP7Q5T2T1 576 aa13.37□□□□□ -0.27
LIG1-203ENST00000536218 IL27RAQ6UWB1 636 aa13.37□□□□□ -0.27
LIG1-203ENST00000536218 GRASPQ7Z6J2 395 aaPredicted RBP13.37□□□□□ -0.27
LIG1-203ENST00000536218 GALNT10Q86SR1 603 aa13.37□□□□□ -0.27
LIG1-203ENST00000536218 MRPL43Q8N983 215 aaKnown RBP13.37□□□□□ -0.27
LIG1-203ENST00000536218 OR8K3Q8NH51 312 aa13.37□□□□□ -0.27
LIG1-203ENST00000536218 RAD18Q9NS91 495 aa13.37□□□□□ -0.27
LIG1-203ENST00000536218 ZNF222Q9UK12 451 aa13.37□□□□□ -0.27
LIG1-203ENST00000536218 STX16O14662 325 aa13.37□□□□□ -0.27
LIG1-203ENST00000536218 PLA2G10O15496 165 aa13.37□□□□□ -0.27
LIG1-203ENST00000536218 MLYCDO95822 493 aa13.37□□□□□ -0.27
LIG1-203ENST00000536218 CDK1P06493 297 aa13.37□□□□□ -0.27
LIG1-203ENST00000536218 SYN1P17600 705 aa13.37□□□□□ -0.27
LIG1-203ENST00000536218 MAP2K3P46734 347 aa13.37□□□□□ -0.27
LIG1-203ENST00000536218 RGS4P49798 205 aa13.37□□□□□ -0.27
LIG1-203ENST00000536218 RRAS2P62070 204 aaPredicted RBP13.37□□□□□ -0.27
LIG1-203ENST00000536218 NPRL3Q12980 569 aa13.37□□□□□ -0.27
LIG1-203ENST00000536218 RIN1Q13671 783 aa13.37□□□□□ -0.27
LIG1-203ENST00000536218 CDKN3Q16667 212 aa13.37□□□□□ -0.27
LIG1-203ENST00000536218 SBSNQ6UWP8 590 aa13.37□□□□□ -0.27
LIG1-203ENST00000536218 LURAP1LQ8IV03 231 aa13.37□□□□□ -0.27
LIG1-203ENST00000536218 RBPMSQ93062 196 aaKnown RBP13.37□□□□□ -0.27
LIG1-203ENST00000536218 ZNF578Q96N58 590 aaPredicted RBP13.37□□□□□ -0.27
LIG1-203ENST00000536218 CDCP1Q9H5V8 836 aa13.37□□□□□ -0.27
LIG1-203ENST00000536218 BRD9Q9H8M2 597 aa13.37□□□□□ -0.27
LIG1-203ENST00000536218 C3orf14Q9HBI5 128 aa13.37□□□□□ -0.27
LIG1-203ENST00000536218 SPASTQ9UBP0 616 aa13.37□□□□□ -0.27
LIG1-203ENST00000536218 PSORS1C1Q9UIG5 152 aa13.37□□□□□ -0.27
LIG1-203ENST00000536218 MBD1Q9UIS9 605 aaPredicted RBP13.37□□□□□ -0.27
LIG1-203ENST00000536218 CMAHPQ9Y471 501 aa13.37□□□□□ -0.27
LIG1-203ENST00000536218 SOCS5O75159 536 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms