RNA–Protein interactions for RNA: ENST00000535689.5

SNHG1-202, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-202ENST00000535689 CCER2I3L3R5 266 aa3.03□□□□□ -1.92
SNHG1-202ENST00000535689 P2RY10O00398 339 aa3.03□□□□□ -1.92
SNHG1-202ENST00000535689 SLC9A3R1O14745 358 aaPredicted RBP3.03□□□□□ -1.92
SNHG1-202ENST00000535689 PPP1R3DO95685 299 aa3.03□□□□□ -1.92
SNHG1-202ENST00000535689 NR3C1P04150 777 aa3.03□□□□□ -1.92
SNHG1-202ENST00000535689 HLA-DOBP13765 273 aa3.03□□□□□ -1.92
SNHG1-202ENST00000535689 CD59P13987 128 aa3.03□□□□□ -1.92
SNHG1-202ENST00000535689 ADSSP30520 456 aa3.03□□□□□ -1.92
SNHG1-202ENST00000535689 GABRA5P31644 462 aa3.03□□□□□ -1.92
SNHG1-202ENST00000535689 SOAT1P35610 550 aa3.03□□□□□ -1.92
SNHG1-202ENST00000535689 P2RY2P41231 377 aa3.03□□□□□ -1.92
SNHG1-202ENST00000535689 MATKP42679 507 aa3.03□□□□□ -1.92
SNHG1-202ENST00000535689 TNFRSF4P43489 277 aa3.03□□□□□ -1.92
SNHG1-202ENST00000535689 ZNF41P51814 821 aaPredicted RBP3.03□□□□□ -1.92
SNHG1-202ENST00000535689 ARPP19P56211 112 aa3.03□□□□□ -1.92
SNHG1-202ENST00000535689 RIPPLY3P57055 190 aa3.03□□□□□ -1.92
SNHG1-202ENST00000535689 KRTAP10-11P60412 298 aa3.03□□□□□ -1.92
SNHG1-202ENST00000535689 CX3CL1P78423 397 aa3.03□□□□□ -1.92
SNHG1-202ENST00000535689 ROR1Q01973 937 aa3.03□□□□□ -1.92
SNHG1-202ENST00000535689 ZNF33AQ06730 810 aa3.03□□□□□ -1.92
SNHG1-202ENST00000535689 SCN1BQ07699 218 aa3.03□□□□□ -1.92
SNHG1-202ENST00000535689 TWF1Q12792 350 aa3.03□□□□□ -1.92
SNHG1-202ENST00000535689 DRP2Q13474 957 aa3.03□□□□□ -1.92
SNHG1-202ENST00000535689 CUL3Q13618 768 aa3.03□□□□□ -1.92
SNHG1-202ENST00000535689 IL11RAQ14626 422 aa3.03□□□□□ -1.92
SNHG1-202ENST00000535689 TEAD2Q15562 447 aa3.03□□□□□ -1.92
SNHG1-202ENST00000535689 UBE2SQ16763 222 aa3.03□□□□□ -1.92
SNHG1-202ENST00000535689 PHKG1Q16816 387 aa3.03□□□□□ -1.92
SNHG1-202ENST00000535689 ODF4Q2M2E3 257 aa3.03□□□□□ -1.92
SNHG1-202ENST00000535689 DCAF4L1Q3SXM0 396 aa3.03□□□□□ -1.92
SNHG1-202ENST00000535689 ZNF718Q3SXZ3 478 aa3.03□□□□□ -1.92
SNHG1-202ENST00000535689 RNASEH2BQ5TBB1 312 aaKnown RBP3.03□□□□□ -1.92
SNHG1-202ENST00000535689 C20orf194Q5TEA3 1177 aa3.03□□□□□ -1.92
SNHG1-202ENST00000535689 C6orf163Q5TEZ5 329 aa3.03□□□□□ -1.92
SNHG1-202ENST00000535689 RPUSD3Q6P087 351 aaKnown RBP3.03□□□□□ -1.92
SNHG1-202ENST00000535689 ENPP7Q6UWV6 458 aa3.03□□□□□ -1.92
SNHG1-202ENST00000535689 CWC27Q6UX04 472 aaKnown RBP3.03□□□□□ -1.92
SNHG1-202ENST00000535689 RBPMS2Q6ZRY4 209 aaKnown RBP3.03□□□□□ -1.92
SNHG1-202ENST00000535689 Q6ZS52 159 aa3.03□□□□□ -1.92
SNHG1-202ENST00000535689 ZBTB49Q6ZSB9 765 aa3.03□□□□□ -1.92
SNHG1-202ENST00000535689 PIWIL4Q7Z3Z4 852 aaKnown RBP3.03□□□□□ -1.92
SNHG1-202ENST00000535689 DNAJB7Q7Z6W7 309 aaPredicted RBP3.03□□□□□ -1.92
SNHG1-202ENST00000535689 PLD3Q8IV08 490 aa3.03□□□□□ -1.92
SNHG1-202ENST00000535689 NAXDQ8IW45 347 aa3.03□□□□□ -1.92
SNHG1-202ENST00000535689 ZBTB8OSQ8IWT0 167 aa3.03□□□□□ -1.92
SNHG1-202ENST00000535689 CFAP206Q8IYR0 622 aa3.03□□□□□ -1.92
SNHG1-202ENST00000535689 NOA1Q8NC60 698 aaKnown RBP3.03□□□□□ -1.92
SNHG1-202ENST00000535689 CAMKVQ8NCB2 501 aa3.03□□□□□ -1.92
SNHG1-202ENST00000535689 ZNF248Q8NDW4 579 aa3.03□□□□□ -1.92
SNHG1-202ENST00000535689 CCDC148Q8NFR7 591 aa3.03□□□□□ -1.92
SNHG1-202ENST00000535689 OR2T12Q8NG77 320 aa3.03□□□□□ -1.92
SNHG1-202ENST00000535689 KIF18AQ8NI77 898 aa3.03□□□□□ -1.92
SNHG1-202ENST00000535689 OLIG1Q8TAK6 271 aa3.03□□□□□ -1.92
SNHG1-202ENST00000535689 C9orf43Q8TAL5 461 aaPredicted RBP3.03□□□□□ -1.92
SNHG1-202ENST00000535689 SPATA18Q8TC71 538 aa3.03□□□□□ -1.92
SNHG1-202ENST00000535689 C2orf15Q8WU43 125 aaKnown RBP3.03□□□□□ -1.92
SNHG1-202ENST00000535689 MRPS31Q92665 395 aaKnown RBP3.03□□□□□ -1.92
SNHG1-202ENST00000535689 NXNL1Q96CM4 212 aa3.03□□□□□ -1.92
SNHG1-202ENST00000535689 SPDL1Q96EA4 605 aa3.03□□□□□ -1.92
SNHG1-202ENST00000535689 TCEAL4Q96EI5 215 aa3.03□□□□□ -1.92
SNHG1-202ENST00000535689 FAM20AQ96MK3 541 aa3.03□□□□□ -1.92
SNHG1-202ENST00000535689 TSPAN18Q96SJ8 248 aa3.03□□□□□ -1.92
SNHG1-202ENST00000535689 ABHD6Q9BV23 337 aa3.03□□□□□ -1.92
SNHG1-202ENST00000535689 SPRY4Q9C004 299 aa3.03□□□□□ -1.92
SNHG1-202ENST00000535689 PPIL3Q9H2H8 161 aaKnown RBP3.03□□□□□ -1.92
SNHG1-202ENST00000535689 NXF3Q9H4D5 531 aaKnown RBP3.03□□□□□ -1.92
SNHG1-202ENST00000535689 TFB2MQ9H5Q4 396 aaKnown RBP3.03□□□□□ -1.92
SNHG1-202ENST00000535689 DHX33Q9H6R0 707 aaKnown RBP3.03□□□□□ -1.92
SNHG1-202ENST00000535689 ZNF556Q9HAH1 456 aa3.03□□□□□ -1.92
SNHG1-202ENST00000535689 CHST11Q9NPF2 352 aa3.03□□□□□ -1.92
SNHG1-202ENST00000535689 FGF21Q9NSA1 209 aa3.03□□□□□ -1.92
SNHG1-202ENST00000535689 BARHL2Q9NY43 387 aa3.03□□□□□ -1.92
SNHG1-202ENST00000535689 KLHL9Q9P2J3 617 aa3.03□□□□□ -1.92
SNHG1-202ENST00000535689 TXNDC16Q9P2K2 825 aa3.03□□□□□ -1.92
SNHG1-202ENST00000535689 ZDHHC2Q9UIJ5 367 aa3.03□□□□□ -1.92
SNHG1-202ENST00000535689 ACAD8Q9UKU7 415 aa3.03□□□□□ -1.92
SNHG1-202ENST00000535689 GRID1Q9ULK0 1009 aa3.03□□□□□ -1.92
SNHG1-202ENST00000535689 MMP17Q9ULZ9 603 aa3.03□□□□□ -1.92
SNHG1-202ENST00000535689 PADI2Q9Y2J8 665 aa3.03□□□□□ -1.92
SNHG1-202ENST00000535689 PCDHGA1Q9Y5H4 931 aa3.03□□□□□ -1.92
SNHG1-202ENST00000535689 MYOFQ9NZM1 2061 aa3.03□□□□□ -1.92
SNHG1-202ENST00000535689 COL4A2P08572 1712 aa3.02□□□□□ -1.93
SNHG1-202ENST00000535689 MYH11P35749 1972 aa3.02□□□□□ -1.93
SNHG1-202ENST00000535689 DOPEY2Q9Y3R5 2298 aa3.02□□□□□ -1.93
SNHG1-202ENST00000535689 IGLV3-22A0A075B6J6 115 aa3.02□□□□□ -1.93
SNHG1-202ENST00000535689 ESYT2A0FGR8 921 aa3.02□□□□□ -1.93
SNHG1-202ENST00000535689 CASTOR2A6NHX0 329 aa3.02□□□□□ -1.93
SNHG1-202ENST00000535689 ANXA2P2A6NMY6 339 aa3.02□□□□□ -1.93
SNHG1-202ENST00000535689 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.02□□□□□ -1.93
SNHG1-202ENST00000535689 E7EWF7 191 aa3.02□□□□□ -1.93
SNHG1-202ENST00000535689 FAM86B1E9PN63 330 aa3.02□□□□□ -1.93
SNHG1-202ENST00000535689 BMPR1BO00238 502 aa3.02□□□□□ -1.93
SNHG1-202ENST00000535689 O00370 1275 aa3.02□□□□□ -1.93
SNHG1-202ENST00000535689 KLF11O14901 512 aa3.02□□□□□ -1.93
SNHG1-202ENST00000535689 STX6O43752 255 aa3.02□□□□□ -1.93
SNHG1-202ENST00000535689 CREG1O75629 220 aa3.02□□□□□ -1.93
SNHG1-202ENST00000535689 MOCS3O95396 460 aa3.02□□□□□ -1.93
SNHG1-202ENST00000535689 IGHV2-70P01814 119 aa3.02□□□□□ -1.93
SNHG1-202ENST00000535689 C9P02748 559 aa3.02□□□□□ -1.93
SNHG1-202ENST00000535689 PRB1P04280 392 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms