RNA–Protein interactions for RNA: ENST00000535094.6

MCF2L-232, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2L, Length 3,752 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-232ENST00000535094 MZT2BQ6NZ67 158 aa15.21■□□□□ 0.03
MCF2L-232ENST00000535094 FAHD1Q6P587 224 aa15.21■□□□□ 0.03
MCF2L-232ENST00000535094 C11orf54Q9H0W9 315 aaPredicted RBP15.21■□□□□ 0.03
MCF2L-232ENST00000535094 EQTNQ9NQ60 294 aa15.21■□□□□ 0.03
MCF2L-232ENST00000535094 ING3Q9NXR8 418 aa15.21■□□□□ 0.03
MCF2L-232ENST00000535094 CCDC59Q9P031 241 aaKnown RBP15.21■□□□□ 0.03
MCF2L-232ENST00000535094 A0A0G2JMZ2 1700 aa15.21■□□□□ 0.03
MCF2L-232ENST00000535094 LRRC37A2A6NM11 1700 aa15.21■□□□□ 0.03
MCF2L-232ENST00000535094 ISM1B1AKI9 464 aa15.21■□□□□ 0.03
MCF2L-232ENST00000535094 H3BNC9 293 aa15.21■□□□□ 0.03
MCF2L-232ENST00000535094 CHRNB1P11230 501 aa15.21■□□□□ 0.03
MCF2L-232ENST00000535094 MRPL19P49406 292 aaKnown RBP15.21■□□□□ 0.03
MCF2L-232ENST00000535094 MAN2A2P49641 1150 aa15.21■□□□□ 0.03
MCF2L-232ENST00000535094 GZMMP51124 257 aa15.21■□□□□ 0.03
MCF2L-232ENST00000535094 RPS7P62081 194 aaKnown RBP15.21■□□□□ 0.03
MCF2L-232ENST00000535094 HOXC5Q00444 222 aa15.21■□□□□ 0.03
MCF2L-232ENST00000535094 CRB2Q5IJ48 1285 aa15.21■□□□□ 0.03
MCF2L-232ENST00000535094 CEP78Q5JTW2 689 aa15.21■□□□□ 0.03
MCF2L-232ENST00000535094 LINC00299Q6ZSB3 139 aa15.21■□□□□ 0.03
MCF2L-232ENST00000535094 PCSK9Q8NBP7 692 aaKnown RBP15.21■□□□□ 0.03
MCF2L-232ENST00000535094 WDR48Q8TAF3 677 aa15.21■□□□□ 0.03
MCF2L-232ENST00000535094 ASB15Q8WXK1 588 aa15.21■□□□□ 0.03
MCF2L-232ENST00000535094 GULP1Q9UBP9 304 aa15.21■□□□□ 0.03
MCF2L-232ENST00000535094 BTN3A3O00478 584 aa15.21■□□□□ 0.02
MCF2L-232ENST00000535094 SEPT4O43236 478 aa15.21■□□□□ 0.02
MCF2L-232ENST00000535094 IGLV3-27P01718 113 aa15.21■□□□□ 0.02
MCF2L-232ENST00000535094 PRKAR1AP10644 381 aa15.21■□□□□ 0.02
MCF2L-232ENST00000535094 CSTF1Q05048 431 aaKnown RBP15.21■□□□□ 0.02
MCF2L-232ENST00000535094 AMIGO1Q86WK6 493 aa15.21■□□□□ 0.02
MCF2L-232ENST00000535094 ASB11Q8WXH4 323 aa15.21■□□□□ 0.02
MCF2L-232ENST00000535094 LRR1Q96L50 414 aa15.21■□□□□ 0.02
MCF2L-232ENST00000535094 KCTD7Q96MP8 289 aa15.21■□□□□ 0.02
MCF2L-232ENST00000535094 MAPKAP1Q9BPZ7 522 aa15.21■□□□□ 0.02
MCF2L-232ENST00000535094 PTGFRNQ9P2B2 879 aa15.21■□□□□ 0.02
MCF2L-232ENST00000535094 RPL36Q9Y3U8 105 aaKnown RBP15.21■□□□□ 0.02
MCF2L-232ENST00000535094 PSME4Q14997 1843 aa15.21■□□□□ 0.02
MCF2L-232ENST00000535094 ARHGEF33A8MVX0 844 aa15.2■□□□□ 0.02
MCF2L-232ENST00000535094 SLC30A4O14863 429 aa15.2■□□□□ 0.02
MCF2L-232ENST00000535094 NCR1O76036 304 aa15.2■□□□□ 0.02
MCF2L-232ENST00000535094 RPS3P23396 243 aaKnown RBP eCLIP15.2■□□□□ 0.02
MCF2L-232ENST00000535094 CXCR2P25025 360 aa15.2■□□□□ 0.02
MCF2L-232ENST00000535094 HOXD11P31277 338 aaPredicted RBP15.2■□□□□ 0.02
MCF2L-232ENST00000535094 NNMTP40261 264 aa15.2■□□□□ 0.02
MCF2L-232ENST00000535094 EPHB3P54753 998 aa15.2■□□□□ 0.02
MCF2L-232ENST00000535094 LMAN2Q12907 356 aa15.2■□□□□ 0.02
MCF2L-232ENST00000535094 CDK10Q15131 360 aa15.2■□□□□ 0.02
MCF2L-232ENST00000535094 COMMD6Q7Z4G1 85 aa15.2■□□□□ 0.02
MCF2L-232ENST00000535094 LSRQ86X29 649 aaPredicted RBP15.2■□□□□ 0.02
MCF2L-232ENST00000535094 RBM45Q8IUH3 476 aaKnown RBP15.2■□□□□ 0.02
MCF2L-232ENST00000535094 Q8N402 240 aa15.2■□□□□ 0.02
MCF2L-232ENST00000535094 RNFT2Q96EX2 444 aa15.2■□□□□ 0.02
MCF2L-232ENST00000535094 IL17FQ96PD4 163 aa15.2■□□□□ 0.02
MCF2L-232ENST00000535094 ZIC5Q96T25 663 aa15.2■□□□□ 0.02
MCF2L-232ENST00000535094 CCDC32Q9BV29 185 aa15.2■□□□□ 0.02
MCF2L-232ENST00000535094 SEC14L4Q9UDX3 406 aa15.2■□□□□ 0.02
MCF2L-232ENST00000535094 NEDD8-MDP1E9PL57 170 aa15.2■□□□□ 0.02
MCF2L-232ENST00000535094 IL3P08700 152 aa15.2■□□□□ 0.02
MCF2L-232ENST00000535094 SDHBP21912 280 aa15.2■□□□□ 0.02
MCF2L-232ENST00000535094 TIA1P31483 386 aaKnown RBP eCLIP15.2■□□□□ 0.02
MCF2L-232ENST00000535094 PRKCZQ05513 592 aa15.2■□□□□ 0.02
MCF2L-232ENST00000535094 GINS1Q14691 196 aa15.2■□□□□ 0.02
MCF2L-232ENST00000535094 CHST9Q7L1S5 443 aa15.2■□□□□ 0.02
MCF2L-232ENST00000535094 YIPF7Q8N8F6 280 aa15.2■□□□□ 0.02
MCF2L-232ENST00000535094 CHST14Q8NCH0 376 aa15.2■□□□□ 0.02
MCF2L-232ENST00000535094 SORCS1Q8WY21 1168 aa15.2■□□□□ 0.02
MCF2L-232ENST00000535094 NEIL2Q969S2 332 aa15.2■□□□□ 0.02
MCF2L-232ENST00000535094 SCLYQ96I15 445 aa15.2■□□□□ 0.02
MCF2L-232ENST00000535094 ZNF717Q9BY31 904 aaPredicted RBP15.2■□□□□ 0.02
MCF2L-232ENST00000535094 GABARAPL1Q9H0R8 117 aa15.2■□□□□ 0.02
MCF2L-232ENST00000535094 PCDH10Q9P2E7 1040 aa15.2■□□□□ 0.02
MCF2L-232ENST00000535094 SLC25A13Q9UJS0 675 aa15.2■□□□□ 0.02
MCF2L-232ENST00000535094 PCDHGA2Q9Y5H1 932 aa15.2■□□□□ 0.02
MCF2L-232ENST00000535094 TRAV6A0A075B6T7 132 aa15.2■□□□□ 0.02
MCF2L-232ENST00000535094 GLOD5A6NK44 160 aa15.2■□□□□ 0.02
MCF2L-232ENST00000535094 SGTAO43765 313 aa15.2■□□□□ 0.02
MCF2L-232ENST00000535094 NOS1APO75052 506 aaPredicted RBP15.2■□□□□ 0.02
MCF2L-232ENST00000535094 CELP19835 753 aa15.2■□□□□ 0.02
MCF2L-232ENST00000535094 PTPN6P29350 595 aa15.2■□□□□ 0.02
MCF2L-232ENST00000535094 GPAT3Q53EU6 434 aa15.2■□□□□ 0.02
MCF2L-232ENST00000535094 ZNF385BQ569K4 471 aa15.2■□□□□ 0.02
MCF2L-232ENST00000535094 DCAF4L2Q8NA75 395 aa15.2■□□□□ 0.02
MCF2L-232ENST00000535094 ZNF740Q8NDX6 193 aa15.2■□□□□ 0.02
MCF2L-232ENST00000535094 GRPEL2Q8TAA5 225 aa15.2■□□□□ 0.02
MCF2L-232ENST00000535094 REEP4Q9H6H4 257 aa15.2■□□□□ 0.02
MCF2L-232ENST00000535094 KCNK12Q9HB15 430 aa15.2■□□□□ 0.02
MCF2L-232ENST00000535094 SATB2Q9UPW6 733 aa15.2■□□□□ 0.02
MCF2L-232ENST00000535094 MAPRE3Q9UPY8 281 aa15.2■□□□□ 0.02
MCF2L-232ENST00000535094 ZNF236Q9UL36 1845 aa15.19■□□□□ 0.02
MCF2L-232ENST00000535094 LOC102723532A0A0G2JNH3 316 aa15.19■□□□□ 0.02
MCF2L-232ENST00000535094 CD160O95971 181 aa15.19■□□□□ 0.02
MCF2L-232ENST00000535094 H1F0P07305 194 aaKnown RBP15.19■□□□□ 0.02
MCF2L-232ENST00000535094 RFX3P48380 749 aa15.19■□□□□ 0.02
MCF2L-232ENST00000535094 AP1S2P56377 157 aa15.19■□□□□ 0.02
MCF2L-232ENST00000535094 WNT3P56703 355 aa15.19■□□□□ 0.02
MCF2L-232ENST00000535094 ZNF763Q0D2J5 394 aa15.19■□□□□ 0.02
MCF2L-232ENST00000535094 CRHR2Q13324 411 aa15.19■□□□□ 0.02
MCF2L-232ENST00000535094 NLRP8Q86W28 1048 aa15.19■□□□□ 0.02
MCF2L-232ENST00000535094 OR8H3Q8N146 312 aa15.19■□□□□ 0.02
MCF2L-232ENST00000535094 OR2A14Q96R47 310 aa15.19■□□□□ 0.02
MCF2L-232ENST00000535094 NELL2Q99435 816 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms