RNA–Protein interactions for RNA: ENST00000534442.5

ECHDC1-223, Transcript of ethylmalonyl-CoA decarboxylase 1, human

TSL 5

Gene ECHDC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC1-223	ENST00000534442	PRR26	Q8N8Z3	221 aa		4.19	□□□□□ -1.74
ECHDC1-223	ENST00000534442	DNAAF3	Q8N9W5	541 aa		4.19	□□□□□ -1.74
ECHDC1-223	ENST00000534442	GANC	Q8TET4	914 aa		4.19	□□□□□ -1.74
ECHDC1-223	ENST00000534442	ARHGAP45	Q92619	1136 aa		4.19	□□□□□ -1.74
ECHDC1-223	ENST00000534442	ESR2	Q92731	530 aa		4.19	□□□□□ -1.74
ECHDC1-223	ENST00000534442	TXNDC15	Q96J42	360 aa		4.19	□□□□□ -1.74
ECHDC1-223	ENST00000534442	OLFM1	Q99784	485 aa		4.19	□□□□□ -1.74
ECHDC1-223	ENST00000534442	MMTAG2	Q9BU76	263 aa	Known RBP	4.19	□□□□□ -1.74
ECHDC1-223	ENST00000534442	TNMD	Q9H2S6	317 aa		4.19	□□□□□ -1.74
ECHDC1-223	ENST00000534442	LRRN3	Q9H3W5	708 aa		4.19	□□□□□ -1.74
ECHDC1-223	ENST00000534442	CHMP1A	Q9HD42	196 aa	Predicted RBP	4.19	□□□□□ -1.74
ECHDC1-223	ENST00000534442	POT1	Q9NUX5	634 aa		4.19	□□□□□ -1.74
ECHDC1-223	ENST00000534442	IL17C	Q9P0M4	197 aa		4.19	□□□□□ -1.74
ECHDC1-223	ENST00000534442	CA5B	Q9Y2D0	317 aa		4.19	□□□□□ -1.74
ECHDC1-223	ENST00000534442	FRAS1	Q86XX4	4008 aa		4.18	□□□□□ -1.74
ECHDC1-223	ENST00000534442	EDDM13	A0A1B0GTR0	161 aa		4.18	□□□□□ -1.74
ECHDC1-223	ENST00000534442		A0A1W2PPM1	405 aa		4.18	□□□□□ -1.74
ECHDC1-223	ENST00000534442	HS3ST1	O14792	307 aa		4.18	□□□□□ -1.74
ECHDC1-223	ENST00000534442	PPEF2	O14830	753 aa		4.18	□□□□□ -1.74
ECHDC1-223	ENST00000534442	NDUFS4	O43181	175 aa		4.18	□□□□□ -1.74
ECHDC1-223	ENST00000534442	TLX2	O43763	284 aa	Predicted RBP	4.18	□□□□□ -1.74
ECHDC1-223	ENST00000534442	TRUB2	O95900	331 aa	Known RBP	4.18	□□□□□ -1.74
ECHDC1-223	ENST00000534442	TMEM191B	P0C7N4	346 aa		4.18	□□□□□ -1.74
ECHDC1-223	ENST00000534442	VPREB1	P12018	145 aa		4.18	□□□□□ -1.74
ECHDC1-223	ENST00000534442	GNL1	P36915	607 aa	Predicted RBP	4.18	□□□□□ -1.74
ECHDC1-223	ENST00000534442	BRWD1-AS2	P59051	145 aa		4.18	□□□□□ -1.74
ECHDC1-223	ENST00000534442	NANOS3	P60323	173 aa	Known RBP	4.18	□□□□□ -1.74
ECHDC1-223	ENST00000534442	RPS14	P62263	151 aa	Known RBP	4.18	□□□□□ -1.74
ECHDC1-223	ENST00000534442	ROR2	Q01974	943 aa	Known RBP	4.18	□□□□□ -1.74
ECHDC1-223	ENST00000534442	PRKCE	Q02156	737 aa		4.18	□□□□□ -1.74
ECHDC1-223	ENST00000534442	DMP1	Q13316	513 aa	Predicted RBP	4.18	□□□□□ -1.74
ECHDC1-223	ENST00000534442	UBE2V1	Q13404	147 aa		4.18	□□□□□ -1.74
ECHDC1-223	ENST00000534442	RAPSN	Q13702	412 aa		4.18	□□□□□ -1.74
ECHDC1-223	ENST00000534442	MELK	Q14680	651 aa		4.18	□□□□□ -1.74
ECHDC1-223	ENST00000534442	KRTCAP3	Q53RY4	240 aa		4.18	□□□□□ -1.74
ECHDC1-223	ENST00000534442	LYPLAL1	Q5VWZ2	237 aa		4.18	□□□□□ -1.74
ECHDC1-223	ENST00000534442	MFSD6	Q6ZSS7	791 aa		4.18	□□□□□ -1.74
ECHDC1-223	ENST00000534442	ZNF534	Q76KX8	674 aa		4.18	□□□□□ -1.74
ECHDC1-223	ENST00000534442	EMC1	Q8N766	993 aa		4.18	□□□□□ -1.74
ECHDC1-223	ENST00000534442	OR2T34	Q8NGX1	318 aa		4.18	□□□□□ -1.74
ECHDC1-223	ENST00000534442	OR5R1	Q8NH85	324 aa		4.18	□□□□□ -1.74
ECHDC1-223	ENST00000534442	KIF18A	Q8NI77	898 aa		4.18	□□□□□ -1.74
ECHDC1-223	ENST00000534442	WDR20	Q8TBZ3	569 aa		4.18	□□□□□ -1.74
ECHDC1-223	ENST00000534442	SPACA9	Q96E40	222 aa	Predicted RBP	4.18	□□□□□ -1.74
ECHDC1-223	ENST00000534442	CSF3R	Q99062	836 aa		4.18	□□□□□ -1.74
ECHDC1-223	ENST00000534442	JPH2	Q9BR39	696 aa	Predicted RBP	4.18	□□□□□ -1.74
ECHDC1-223	ENST00000534442	SLC25A33	Q9BSK2	321 aa		4.18	□□□□□ -1.74
ECHDC1-223	ENST00000534442	ABHD6	Q9BV23	337 aa		4.18	□□□□□ -1.74
ECHDC1-223	ENST00000534442	ANKZF1	Q9H8Y5	726 aa		4.18	□□□□□ -1.74
ECHDC1-223	ENST00000534442	ELOVL5	Q9NYP7	299 aa		4.18	□□□□□ -1.74
ECHDC1-223	ENST00000534442	C1RL	Q9NZP8	487 aa		4.18	□□□□□ -1.74
ECHDC1-223	ENST00000534442	C11orf21	Q9P2W6	132 aa		4.18	□□□□□ -1.74
ECHDC1-223	ENST00000534442	THAP10	Q9P2Z0	257 aa	Predicted RBP	4.18	□□□□□ -1.74
ECHDC1-223	ENST00000534442	ANAPC5	Q9UJX4	755 aa		4.18	□□□□□ -1.74
ECHDC1-223	ENST00000534442	FZD10	Q9ULW2	581 aa		4.18	□□□□□ -1.74
ECHDC1-223	ENST00000534442	PTPRJ	Q12913	1337 aa		4.18	□□□□□ -1.74
ECHDC1-223	ENST00000534442	GTF3C1	Q12789	2109 aa		4.18	□□□□□ -1.74
ECHDC1-223	ENST00000534442	ABCA1	O95477	2261 aa		4.18	□□□□□ -1.74
ECHDC1-223	ENST00000534442		A0A0B4J293	547 aa		4.17	□□□□□ -1.74
ECHDC1-223	ENST00000534442		A0A1W2PP11	408 aa		4.17	□□□□□ -1.74
ECHDC1-223	ENST00000534442	FEZF1	A0PJY2	475 aa		4.17	□□□□□ -1.74
ECHDC1-223	ENST00000534442	GOLGA6L9	A6NEM1	432 aa		4.17	□□□□□ -1.74
ECHDC1-223	ENST00000534442	OR6C75	A6NL08	312 aa		4.17	□□□□□ -1.74
ECHDC1-223	ENST00000534442	SOCS2	O14508	198 aa		4.17	□□□□□ -1.74
ECHDC1-223	ENST00000534442	MSH4	O15457	936 aa		4.17	□□□□□ -1.74
ECHDC1-223	ENST00000534442	RECQL5	O94762	991 aa	Predicted RBP	4.17	□□□□□ -1.74
ECHDC1-223	ENST00000534442	PLA2G4B	P0C869	781 aa		4.17	□□□□□ -1.74
ECHDC1-223	ENST00000534442	C21orf33	P30042	268 aa	Predicted RBP	4.17	□□□□□ -1.74
ECHDC1-223	ENST00000534442	HOXD3	P31249	432 aa	Predicted RBP	4.17	□□□□□ -1.74
ECHDC1-223	ENST00000534442	TUFM	P49411	452 aa	Known RBP	4.17	□□□□□ -1.74
ECHDC1-223	ENST00000534442	NT5C2	P49902	561 aa		4.17	□□□□□ -1.74
ECHDC1-223	ENST00000534442	RAB28	P51157	221 aa		4.17	□□□□□ -1.74
ECHDC1-223	ENST00000534442	CLCNKA	P51800	687 aa		4.17	□□□□□ -1.74
ECHDC1-223	ENST00000534442	HNRNPK	P61978	463 aa	Known RBP eCLIP	4.17	□□□□□ -1.74
ECHDC1-223	ENST00000534442	OTUD4	Q01804	1114 aa	Known RBP	4.17	□□□□□ -1.74
ECHDC1-223	ENST00000534442	YWHAH	Q04917	246 aa	Predicted RBP	4.17	□□□□□ -1.74
ECHDC1-223	ENST00000534442	TRAF3	Q13114	568 aa		4.17	□□□□□ -1.74
ECHDC1-223	ENST00000534442	ZNF234	Q14588	700 aa		4.17	□□□□□ -1.74
ECHDC1-223	ENST00000534442	SMN1	Q16637	294 aa	Known RBP	4.17	□□□□□ -1.74
ECHDC1-223	ENST00000534442	HYAL4	Q2M3T9	481 aa		4.17	□□□□□ -1.74
ECHDC1-223	ENST00000534442	SETMAR	Q53H47	684 aa	Predicted RBP	4.17	□□□□□ -1.74
ECHDC1-223	ENST00000534442	DCAF12	Q5T6F0	453 aa		4.17	□□□□□ -1.74
ECHDC1-223	ENST00000534442	ALS2CL	Q60I27	953 aa		4.17	□□□□□ -1.74
ECHDC1-223	ENST00000534442	C11orf87	Q6NUJ2	197 aa		4.17	□□□□□ -1.74
ECHDC1-223	ENST00000534442	SLC27A1	Q6PCB7	646 aa		4.17	□□□□□ -1.74
ECHDC1-223	ENST00000534442	TMEM207	Q6UWW9	146 aa		4.17	□□□□□ -1.74
ECHDC1-223	ENST00000534442	CCBE1	Q6UXH8	406 aa	Predicted RBP	4.17	□□□□□ -1.74
ECHDC1-223	ENST00000534442	NIPA1	Q7RTP0	329 aa		4.17	□□□□□ -1.74
ECHDC1-223	ENST00000534442	PIM3	Q86V86	326 aa		4.17	□□□□□ -1.74
ECHDC1-223	ENST00000534442	TMEM25	Q86YD3	366 aa		4.17	□□□□□ -1.74
ECHDC1-223	ENST00000534442	PM20D2	Q8IYS1	436 aa		4.17	□□□□□ -1.74
ECHDC1-223	ENST00000534442	OR8H3	Q8N146	312 aa		4.17	□□□□□ -1.74
ECHDC1-223	ENST00000534442	GCSAM	Q8N6F7	178 aa		4.17	□□□□□ -1.74
ECHDC1-223	ENST00000534442	MAPK1IP1L	Q8NDC0	245 aa		4.17	□□□□□ -1.74
ECHDC1-223	ENST00000534442	CCDC112	Q8NEF3	446 aa		4.17	□□□□□ -1.74
ECHDC1-223	ENST00000534442	CA5BP1	Q8WTZ4	195 aa		4.17	□□□□□ -1.74
ECHDC1-223	ENST00000534442	SLC44A1	Q8WWI5	657 aa		4.17	□□□□□ -1.74
ECHDC1-223	ENST00000534442	IL12RB2	Q99665	862 aa		4.17	□□□□□ -1.74
ECHDC1-223	ENST00000534442	NUP85	Q9BW27	656 aa		4.17	□□□□□ -1.74
ECHDC1-223	ENST00000534442	CALN1	Q9BXU9	219 aa		4.17	□□□□□ -1.74

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