RNA–Protein interactions for RNA: ENST00000533820.5

CAPN1-226, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-226ENST00000533820 MCCC1Q96RQ3 725 aaPredicted RBP18.48■□□□□ 0.55
CAPN1-226ENST00000533820 YME1L1Q96TA2 773 aa18.48■□□□□ 0.55
CAPN1-226ENST00000533820 TTYH2Q9BSA4 534 aa18.48■□□□□ 0.55
CAPN1-226ENST00000533820 ACER3Q9NUN7 267 aa18.48■□□□□ 0.55
CAPN1-226ENST00000533820 ZNF282Q9UDV7 671 aaPredicted RBP18.48■□□□□ 0.55
CAPN1-226ENST00000533820 CLEC2DQ9UHP7 191 aa18.48■□□□□ 0.55
CAPN1-226ENST00000533820 TRBC2A0A5B9 178 aa18.47■□□□□ 0.55
CAPN1-226ENST00000533820 SAGE2PA6NJ88 616 aa18.47■□□□□ 0.55
CAPN1-226ENST00000533820 CATP04040 527 aaKnown RBP18.47■□□□□ 0.55
CAPN1-226ENST00000533820 SP140Q13342 867 aa18.47■□□□□ 0.55
CAPN1-226ENST00000533820 MPEG1Q2M385 716 aa18.47■□□□□ 0.55
CAPN1-226ENST00000533820 GALNT12Q8IXK2 581 aa18.47■□□□□ 0.55
CAPN1-226ENST00000533820 CELF5Q8N6W0 485 aaKnown RBP18.47■□□□□ 0.55
CAPN1-226ENST00000533820 CHTF18Q8WVB6 975 aa18.47■□□□□ 0.55
CAPN1-226ENST00000533820 C11orf24Q96F05 449 aaPredicted RBP18.47■□□□□ 0.55
CAPN1-226ENST00000533820 SPNS1Q9H2V7 528 aa18.47■□□□□ 0.55
CAPN1-226ENST00000533820 PAQR5Q9NXK6 330 aaPredicted RBP18.47■□□□□ 0.55
CAPN1-226ENST00000533820 GSTM1P09488 218 aa18.47■□□□□ 0.55
CAPN1-226ENST00000533820 HNF4AP41235 474 aa18.47■□□□□ 0.55
CAPN1-226ENST00000533820 ARSIQ5FYB1 569 aa18.47■□□□□ 0.55
CAPN1-226ENST00000533820 ZMAT1Q5H9K5 638 aa18.47■□□□□ 0.55
CAPN1-226ENST00000533820 GDPD4Q6W3E5 623 aa18.47■□□□□ 0.55
CAPN1-226ENST00000533820 WDR53Q7Z5U6 358 aaPredicted RBP18.47■□□□□ 0.55
CAPN1-226ENST00000533820 CRIPAKQ8N1N5 446 aa18.47■□□□□ 0.55
CAPN1-226ENST00000533820 OR4C15Q8NGM1 316 aa18.47■□□□□ 0.55
CAPN1-226ENST00000533820 JPH3Q8WXH2 748 aaPredicted RBP18.47■□□□□ 0.55
CAPN1-226ENST00000533820 C5AR2Q9P296 337 aa18.47■□□□□ 0.55
CAPN1-226ENST00000533820 ZNF221Q9UK13 617 aa18.47■□□□□ 0.55
CAPN1-226ENST00000533820 KCNE2Q9Y6J6 123 aa18.47■□□□□ 0.55
CAPN1-226ENST00000533820 UNC80Q8N2C7 3258 aa18.47■□□□□ 0.55
CAPN1-226ENST00000533820 ISPDA4D126 451 aa18.46■□□□□ 0.55
CAPN1-226ENST00000533820 TFECO14948 347 aaPredicted RBP18.46■□□□□ 0.55
CAPN1-226ENST00000533820 TPST2O60704 377 aa18.46■□□□□ 0.55
CAPN1-226ENST00000533820 TNFRSF21O75509 655 aa18.46■□□□□ 0.55
CAPN1-226ENST00000533820 LEFTY1O75610 366 aa18.46■□□□□ 0.55
CAPN1-226ENST00000533820 SOD2P04179 222 aa18.46■□□□□ 0.55
CAPN1-226ENST00000533820 IL32P24001 234 aa18.46■□□□□ 0.55
CAPN1-226ENST00000533820 HTR2BP41595 481 aa18.46■□□□□ 0.55
CAPN1-226ENST00000533820 RECQLP46063 649 aaPredicted RBP18.46■□□□□ 0.55
CAPN1-226ENST00000533820 TAB1Q15750 504 aa18.46■□□□□ 0.55
CAPN1-226ENST00000533820 TPGS2Q68CL5 300 aa18.46■□□□□ 0.55
CAPN1-226ENST00000533820 TMEM220Q6QAJ8 160 aa18.46■□□□□ 0.55
CAPN1-226ENST00000533820 LACC1Q8IV20 430 aa18.46■□□□□ 0.55
CAPN1-226ENST00000533820 FLCNQ8NFG4 579 aa18.46■□□□□ 0.55
CAPN1-226ENST00000533820 CD99L2Q8TCZ2 262 aa18.46■□□□□ 0.55
CAPN1-226ENST00000533820 RAB8BQ92930 207 aa18.46■□□□□ 0.55
CAPN1-226ENST00000533820 WRAP53Q9BUR4 548 aaKnown RBP18.46■□□□□ 0.55
CAPN1-226ENST00000533820 REEP4Q9H6H4 257 aa18.46■□□□□ 0.55
CAPN1-226ENST00000533820 TOR4AQ9NXH8 423 aa18.46■□□□□ 0.55
CAPN1-226ENST00000533820 H0YIV9 168 aa18.46■□□□□ 0.55
CAPN1-226ENST00000533820 LEFTY2O00292 366 aa18.46■□□□□ 0.55
CAPN1-226ENST00000533820 SEMA3DO95025 777 aa18.46■□□□□ 0.55
CAPN1-226ENST00000533820 GABRB1P18505 474 aa18.46■□□□□ 0.55
CAPN1-226ENST00000533820 CHMP24386 653 aa18.46■□□□□ 0.55
CAPN1-226ENST00000533820 SLC9A3P48764 834 aa18.46■□□□□ 0.55
CAPN1-226ENST00000533820 CDC42P60953 191 aa18.46■□□□□ 0.55
CAPN1-226ENST00000533820 CDC20Q12834 499 aa18.46■□□□□ 0.55
CAPN1-226ENST00000533820 MED27Q6P2C8 311 aa18.46■□□□□ 0.55
CAPN1-226ENST00000533820 SLC34A3Q8N130 599 aa18.46■□□□□ 0.55
CAPN1-226ENST00000533820 NEDD4LQ96PU5 975 aa18.46■□□□□ 0.55
CAPN1-226ENST00000533820 ZSCAN5AQ9BUG6 496 aa18.46■□□□□ 0.55
CAPN1-226ENST00000533820 PLCXD1Q9NUJ7 323 aa18.46■□□□□ 0.55
CAPN1-226ENST00000533820 KLHL42Q9P2K6 505 aa18.46■□□□□ 0.55
CAPN1-226ENST00000533820 SLC25A13Q9UJS0 675 aa18.46■□□□□ 0.55
CAPN1-226ENST00000533820 ATP6V1G2-DDX39BF2Z307 99 aa18.46■□□□□ 0.54
CAPN1-226ENST00000533820 GPX5O75715 221 aa18.46■□□□□ 0.54
CAPN1-226ENST00000533820 CCNB2O95067 398 aa18.46■□□□□ 0.54
CAPN1-226ENST00000533820 XPAP23025 273 aaPredicted RBP18.46■□□□□ 0.54
CAPN1-226ENST00000533820 TBPL1P62380 186 aa18.46■□□□□ 0.54
CAPN1-226ENST00000533820 SP3Q02447 781 aa18.46■□□□□ 0.54
CAPN1-226ENST00000533820 BCL7AQ4VC05 210 aa18.46■□□□□ 0.54
CAPN1-226ENST00000533820 NXNL2Q5VZ03 156 aa18.46■□□□□ 0.54
CAPN1-226ENST00000533820 LHX8Q68G74 356 aa18.46■□□□□ 0.54
CAPN1-226ENST00000533820 SZRD1Q7Z422 152 aa18.46■□□□□ 0.54
CAPN1-226ENST00000533820 UBE2J2Q8N2K1 259 aa18.46■□□□□ 0.54
CAPN1-226ENST00000533820 NMNAT1Q9HAN9 279 aaPredicted RBP18.46■□□□□ 0.54
CAPN1-226ENST00000533820 RPRD1BQ9NQG5 326 aaKnown RBP18.46■□□□□ 0.54
CAPN1-226ENST00000533820 SNTG1Q9NSN8 517 aa18.46■□□□□ 0.54
CAPN1-226ENST00000533820 TRBV4-1A0A0J9YWV2 114 aa18.45■□□□□ 0.54
CAPN1-226ENST00000533820 H3BN98 237 aa18.45■□□□□ 0.54
CAPN1-226ENST00000533820 MRPS14O60783 128 aaKnown RBP18.45■□□□□ 0.54
CAPN1-226ENST00000533820 ENTPD6O75354 484 aa18.45■□□□□ 0.54
CAPN1-226ENST00000533820 SLCO2B1O94956 709 aa18.45■□□□□ 0.54
CAPN1-226ENST00000533820 PPIBP23284 216 aaKnown RBP18.45■□□□□ 0.54
CAPN1-226ENST00000533820 SOX6P35712 828 aa18.45■□□□□ 0.54
CAPN1-226ENST00000533820 OR3A3P47888 321 aa18.45■□□□□ 0.54
CAPN1-226ENST00000533820 ZNF45Q02386 682 aa18.45■□□□□ 0.54
CAPN1-226ENST00000533820 ZNF763Q0D2J5 394 aa18.45■□□□□ 0.54
CAPN1-226ENST00000533820 CFAP206Q8IYR0 622 aa18.45■□□□□ 0.54
CAPN1-226ENST00000533820 OR2A12Q8NGT7 310 aa18.45■□□□□ 0.54
CAPN1-226ENST00000533820 ZNF480Q8WV37 535 aa18.45■□□□□ 0.54
CAPN1-226ENST00000533820 COQ8BQ96D53 544 aa18.45■□□□□ 0.54
CAPN1-226ENST00000533820 PIP5K1AQ99755 562 aa18.45■□□□□ 0.54
CAPN1-226ENST00000533820 MKRN2Q9H000 416 aaKnown RBP18.45■□□□□ 0.54
CAPN1-226ENST00000533820 CORO2BQ9UQ03 480 aa18.45■□□□□ 0.54
CAPN1-226ENST00000533820 HCN4Q9Y3Q4 1203 aa18.45■□□□□ 0.54
CAPN1-226ENST00000533820 CDH23Q9H251 3354 aa18.45■□□□□ 0.54
CAPN1-226ENST00000533820 RTCAO00442 366 aaKnown RBP18.45■□□□□ 0.54
CAPN1-226ENST00000533820 SLC16A5O15375 505 aa18.45■□□□□ 0.54
CAPN1-226ENST00000533820 APOL3O95236 402 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms