RNA–Protein interactions for RNA: ENST00000533738.6

NUCB2-216, Transcript of nucleobindin 2, humanhuman

TSL 1 (best)

Gene NUCB2, Length 534 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCB2-216ENST00000533738 TERF2Q15554 542 aa11.12□□□□□ -0.63
NUCB2-216ENST00000533738 RPUSD3Q6P087 351 aaKnown RBP11.12□□□□□ -0.63
NUCB2-216ENST00000533738 TUBA3EQ6PEY2 450 aa11.12□□□□□ -0.63
NUCB2-216ENST00000533738 LCA5Q86VQ0 697 aa11.12□□□□□ -0.63
NUCB2-216ENST00000533738 APCDD1LQ8NCL9 501 aa11.12□□□□□ -0.63
NUCB2-216ENST00000533738 OR4F6Q8NGB9 312 aa11.12□□□□□ -0.63
NUCB2-216ENST00000533738 ACMSDQ8TDX5 336 aa11.12□□□□□ -0.63
NUCB2-216ENST00000533738 GRHL3Q8TE85 626 aa11.12□□□□□ -0.63
NUCB2-216ENST00000533738 CCDC77Q9BR77 488 aa11.12□□□□□ -0.63
NUCB2-216ENST00000533738 CENPKQ9BS16 269 aa11.12□□□□□ -0.63
NUCB2-216ENST00000533738 CDCP1Q9H5V8 836 aa11.12□□□□□ -0.63
NUCB2-216ENST00000533738 ANKRD10Q9NXR5 420 aa11.12□□□□□ -0.63
NUCB2-216ENST00000533738 ZNF223Q9UK11 482 aaPredicted RBP11.12□□□□□ -0.63
NUCB2-216ENST00000533738 TRBV11-1A0A0K0K1C0 115 aa11.11□□□□□ -0.63
NUCB2-216ENST00000533738 A0A1W2PPM1 405 aa11.11□□□□□ -0.63
NUCB2-216ENST00000533738 SMIM23A6NLE4 172 aa11.11□□□□□ -0.63
NUCB2-216ENST00000533738 GABRR3A8MPY1 467 aa11.11□□□□□ -0.63
NUCB2-216ENST00000533738 FOXE1O00358 373 aaPredicted RBP11.11□□□□□ -0.63
NUCB2-216ENST00000533738 DLX3O60479 287 aa11.11□□□□□ -0.63
NUCB2-216ENST00000533738 PRAMEF2O60811 474 aa11.11□□□□□ -0.63
NUCB2-216ENST00000533738 LDB3O75112 727 aa11.11□□□□□ -0.63
NUCB2-216ENST00000533738 EEDO75530 441 aaKnown RBP11.11□□□□□ -0.63
NUCB2-216ENST00000533738 CBX6O95503 412 aa11.11□□□□□ -0.63
NUCB2-216ENST00000533738 TAC1P20366 129 aa11.11□□□□□ -0.63
NUCB2-216ENST00000533738 CPN2P22792 545 aa11.11□□□□□ -0.63
NUCB2-216ENST00000533738 TPP2P29144 1249 aaPredicted RBP11.11□□□□□ -0.63
NUCB2-216ENST00000533738 BSGP35613 385 aa11.11□□□□□ -0.63
NUCB2-216ENST00000533738 SLCO1A2P46721 670 aa11.11□□□□□ -0.63
NUCB2-216ENST00000533738 ARFIP1P53367 373 aa11.11□□□□□ -0.63
NUCB2-216ENST00000533738 CDH13P55290 713 aa11.11□□□□□ -0.63
NUCB2-216ENST00000533738 HNRNPH2P55795 449 aaKnown RBP11.11□□□□□ -0.63
NUCB2-216ENST00000533738 VSNL1P62760 191 aa11.11□□□□□ -0.63
NUCB2-216ENST00000533738 HERVK_113P63132 956 aa11.11□□□□□ -0.63
NUCB2-216ENST00000533738 ID2Q02363 134 aa11.11□□□□□ -0.63
NUCB2-216ENST00000533738 CUL3Q13618 768 aa11.11□□□□□ -0.63
NUCB2-216ENST00000533738 UBAP2LQ14157 1087 aaKnown RBP11.11□□□□□ -0.63
NUCB2-216ENST00000533738 INAQ16352 499 aa11.11□□□□□ -0.63
NUCB2-216ENST00000533738 GGTA1PQ4G0N0 100 aa11.11□□□□□ -0.63
NUCB2-216ENST00000533738 ZNF678Q5SXM1 525 aa11.11□□□□□ -0.63
NUCB2-216ENST00000533738 FRG2Q64ET8 278 aa11.11□□□□□ -0.63
NUCB2-216ENST00000533738 LETMD1Q6P1Q0 360 aa11.11□□□□□ -0.63
NUCB2-216ENST00000533738 LGI4Q8N135 537 aa11.11□□□□□ -0.63
NUCB2-216ENST00000533738 ZCCHC7Q8N3Z6 543 aaKnown RBP11.11□□□□□ -0.63
NUCB2-216ENST00000533738 FAM26EQ8N5C1 309 aa11.11□□□□□ -0.63
NUCB2-216ENST00000533738 MDS2Q8NDY4 140 aa11.11□□□□□ -0.63
NUCB2-216ENST00000533738 B3GNT7Q8NFL0 401 aa11.11□□□□□ -0.63
NUCB2-216ENST00000533738 EPS8L3Q8TE67 593 aaKnown RBP11.11□□□□□ -0.63
NUCB2-216ENST00000533738 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.11□□□□□ -0.63
NUCB2-216ENST00000533738 NCLNQ969V3 563 aa11.11□□□□□ -0.63
NUCB2-216ENST00000533738 ANKRD9Q96BM1 317 aaPredicted RBP11.11□□□□□ -0.63
NUCB2-216ENST00000533738 MTFMTQ96DP5 389 aaKnown RBP11.11□□□□□ -0.63
NUCB2-216ENST00000533738 SIGLEC12Q96PQ1 595 aa11.11□□□□□ -0.63
NUCB2-216ENST00000533738 TMEM237Q96Q45 408 aa11.11□□□□□ -0.63
NUCB2-216ENST00000533738 FRG2BQ96QU4 278 aa11.11□□□□□ -0.63
NUCB2-216ENST00000533738 TAAR6Q96RI8 345 aa11.11□□□□□ -0.63
NUCB2-216ENST00000533738 ERVK-6Q9BXR3 956 aa11.11□□□□□ -0.63
NUCB2-216ENST00000533738 ALOXE3Q9BYJ1 711 aa11.11□□□□□ -0.63
NUCB2-216ENST00000533738 ADAP2Q9NPF8 381 aa11.11□□□□□ -0.63
NUCB2-216ENST00000533738 AGPAT4Q9NRZ5 378 aa11.11□□□□□ -0.63
NUCB2-216ENST00000533738 PSD3Q9NYI0 1048 aa11.11□□□□□ -0.63
NUCB2-216ENST00000533738 ABI3Q9P2A4 366 aa11.11□□□□□ -0.63
NUCB2-216ENST00000533738 ZNF225Q9UK10 706 aa11.11□□□□□ -0.63
NUCB2-216ENST00000533738 EMCNQ9ULC0 261 aa11.11□□□□□ -0.63
NUCB2-216ENST00000533738 PPT2Q9UMR5 302 aa11.11□□□□□ -0.63
NUCB2-216ENST00000533738 PPIEQ9UNP9 301 aaKnown RBP11.11□□□□□ -0.63
NUCB2-216ENST00000533738 SPACA6W5XKT8 324 aa11.11□□□□□ -0.63
NUCB2-216ENST00000533738 PTPN13Q12923 2485 aa11.1□□□□□ -0.63
NUCB2-216ENST00000533738 A0A0A6YYD5 115 aa11.1□□□□□ -0.63
NUCB2-216ENST00000533738 BLACEA4D250 179 aa11.1□□□□□ -0.63
NUCB2-216ENST00000533738 TMPRSS11DO60235 418 aa11.1□□□□□ -0.63
NUCB2-216ENST00000533738 FGF17O60258 216 aa11.1□□□□□ -0.63
NUCB2-216ENST00000533738 PRKRAO75569 313 aaKnown RBP11.1□□□□□ -0.63
NUCB2-216ENST00000533738 OTCP00480 354 aa11.1□□□□□ -0.63
NUCB2-216ENST00000533738 IFNA16P05015 189 aa11.1□□□□□ -0.63
NUCB2-216ENST00000533738 GSTA1P08263 222 aa11.1□□□□□ -0.63
NUCB2-216ENST00000533738 ATP5F1P24539 256 aaPredicted RBP11.1□□□□□ -0.63
NUCB2-216ENST00000533738 HSD17B3P37058 310 aa11.1□□□□□ -0.63
NUCB2-216ENST00000533738 CD96P40200 585 aa11.1□□□□□ -0.63
NUCB2-216ENST00000533738 GPR143P51810 404 aa11.1□□□□□ -0.63
NUCB2-216ENST00000533738 MLF1P58340 268 aa11.1□□□□□ -0.63
NUCB2-216ENST00000533738 TNFRSF17Q02223 184 aa11.1□□□□□ -0.63
NUCB2-216ENST00000533738 CLCQ05315 142 aa11.1□□□□□ -0.63
NUCB2-216ENST00000533738 STX4Q12846 297 aa11.1□□□□□ -0.63
NUCB2-216ENST00000533738 OR1C1Q15619 314 aa11.1□□□□□ -0.63
NUCB2-216ENST00000533738 ELAVL1Q15717 326 aaKnown RBP11.1□□□□□ -0.63
NUCB2-216ENST00000533738 EIF2S3LQ2VIR3 472 aaKnown RBP11.1□□□□□ -0.63
NUCB2-216ENST00000533738 UNC50Q53HI1 259 aa11.1□□□□□ -0.63
NUCB2-216ENST00000533738 ZNF766Q5HY98 468 aa11.1□□□□□ -0.63
NUCB2-216ENST00000533738 ZNF468Q5VIY5 522 aaPredicted RBP11.1□□□□□ -0.63
NUCB2-216ENST00000533738 C18orf63Q68DL7 685 aa11.1□□□□□ -0.63
NUCB2-216ENST00000533738 TTC19Q6DKK2 380 aaPredicted RBP11.1□□□□□ -0.63
NUCB2-216ENST00000533738 MRM1Q6IN84 353 aaKnown RBP11.1□□□□□ -0.63
NUCB2-216ENST00000533738 FAM180AQ6UWF9 173 aa11.1□□□□□ -0.63
NUCB2-216ENST00000533738 SH2D5Q6ZV89 423 aa11.1□□□□□ -0.63
NUCB2-216ENST00000533738 MILR1Q7Z6M3 343 aa11.1□□□□□ -0.63
NUCB2-216ENST00000533738 GPR180Q86V85 440 aa11.1□□□□□ -0.63
NUCB2-216ENST00000533738 RPS19BP1Q86WX3 136 aaKnown RBP11.1□□□□□ -0.63
NUCB2-216ENST00000533738 TDRPQ86YL5 185 aa11.1□□□□□ -0.63
NUCB2-216ENST00000533738 ARMC10Q8N2F6 343 aa11.1□□□□□ -0.63
NUCB2-216ENST00000533738 SUN3Q8TAQ9 357 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms