RNA–Protein interactions for RNA: ENST00000532935.5

CPSF1-210, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-210ENST00000532935 ATP5F1P24539 256 aaPredicted RBP14.38□□□□□ -0.11
CPSF1-210ENST00000532935 PPP2R1BP30154 601 aa14.38□□□□□ -0.11
CPSF1-210ENST00000532935 CDH13P55290 713 aa14.38□□□□□ -0.11
CPSF1-210ENST00000532935 TAS2R50P59544 299 aa14.38□□□□□ -0.11
CPSF1-210ENST00000532935 SLAMF1Q13291 335 aa14.38□□□□□ -0.11
CPSF1-210ENST00000532935 CUL3Q13618 768 aa14.38□□□□□ -0.11
CPSF1-210ENST00000532935 RASA2Q15283 850 aa14.38□□□□□ -0.11
CPSF1-210ENST00000532935 GGTA1PQ4G0N0 100 aa14.38□□□□□ -0.11
CPSF1-210ENST00000532935 ACER2Q5QJU3 275 aa14.38□□□□□ -0.11
CPSF1-210ENST00000532935 ZNF678Q5SXM1 525 aa14.38□□□□□ -0.11
CPSF1-210ENST00000532935 FRG2Q64ET8 278 aa14.38□□□□□ -0.11
CPSF1-210ENST00000532935 TTC19Q6DKK2 380 aaPredicted RBP14.38□□□□□ -0.11
CPSF1-210ENST00000532935 SH2D5Q6ZV89 423 aa14.38□□□□□ -0.11
CPSF1-210ENST00000532935 CRLF3Q8IUI8 442 aa14.38□□□□□ -0.11
CPSF1-210ENST00000532935 ZCCHC7Q8N3Z6 543 aaKnown RBP14.38□□□□□ -0.11
CPSF1-210ENST00000532935 KIF2BQ8N4N8 673 aa14.38□□□□□ -0.11
CPSF1-210ENST00000532935 OR4F6Q8NGB9 312 aa14.38□□□□□ -0.11
CPSF1-210ENST00000532935 MTFMTQ96DP5 389 aaKnown RBP14.38□□□□□ -0.11
CPSF1-210ENST00000532935 TMEM237Q96Q45 408 aa14.38□□□□□ -0.11
CPSF1-210ENST00000532935 FRG2BQ96QU4 278 aa14.38□□□□□ -0.11
CPSF1-210ENST00000532935 NPAS2Q99743 824 aa14.38□□□□□ -0.11
CPSF1-210ENST00000532935 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.38□□□□□ -0.11
CPSF1-210ENST00000532935 PNO1Q9NRX1 252 aaKnown RBP14.38□□□□□ -0.11
CPSF1-210ENST00000532935 ASF1BQ9NVP2 202 aa14.38□□□□□ -0.11
CPSF1-210ENST00000532935 FBXW2Q9UKT8 454 aa14.38□□□□□ -0.11
CPSF1-210ENST00000532935 PPT2Q9UMR5 302 aa14.38□□□□□ -0.11
CPSF1-210ENST00000532935 VPS4AQ9UN37 437 aa14.38□□□□□ -0.11
CPSF1-210ENST00000532935 COPG1Q9Y678 874 aaKnown RBP14.38□□□□□ -0.11
CPSF1-210ENST00000532935 TRAV17A0A0B4J275 112 aa14.37□□□□□ -0.11
CPSF1-210ENST00000532935 BLACEA4D250 179 aa14.37□□□□□ -0.11
CPSF1-210ENST00000532935 SYNDIG1LA6NDD5 238 aa14.37□□□□□ -0.11
CPSF1-210ENST00000532935 PPP6CO00743 305 aa14.37□□□□□ -0.11
CPSF1-210ENST00000532935 CDH16O75309 829 aa14.37□□□□□ -0.11
CPSF1-210ENST00000532935 GLRA3O75311 464 aa14.37□□□□□ -0.11
CPSF1-210ENST00000532935 MYO1DO94832 1006 aa14.37□□□□□ -0.11
CPSF1-210ENST00000532935 SUPT7LO94864 414 aa14.37□□□□□ -0.11
CPSF1-210ENST00000532935 CPN2P22792 545 aa14.37□□□□□ -0.11
CPSF1-210ENST00000532935 PRKAA2P54646 552 aa14.37□□□□□ -0.11
CPSF1-210ENST00000532935 CLCQ05315 142 aa14.37□□□□□ -0.11
CPSF1-210ENST00000532935 IFT88Q13099 833 aa14.37□□□□□ -0.11
CPSF1-210ENST00000532935 TERF2Q15554 542 aa14.37□□□□□ -0.11
CPSF1-210ENST00000532935 MEP1AQ16819 746 aa14.37□□□□□ -0.11
CPSF1-210ENST00000532935 UNC50Q53HI1 259 aa14.37□□□□□ -0.11
CPSF1-210ENST00000532935 C10orf62Q5T681 223 aaPredicted RBP14.37□□□□□ -0.11
CPSF1-210ENST00000532935 LETMD1Q6P1Q0 360 aa14.37□□□□□ -0.11
CPSF1-210ENST00000532935 SLC22A9Q8IVM8 553 aa14.37□□□□□ -0.11
CPSF1-210ENST00000532935 BEST3Q8N1M1 668 aa14.37□□□□□ -0.11
CPSF1-210ENST00000532935 SLC5A8Q8N695 610 aa14.37□□□□□ -0.11
CPSF1-210ENST00000532935 OR1N1Q8NGS0 311 aa14.37□□□□□ -0.11
CPSF1-210ENST00000532935 TRPC4APQ8TEL6 797 aa14.37□□□□□ -0.11
CPSF1-210ENST00000532935 AENQ8WTP8 325 aaKnown RBP14.37□□□□□ -0.11
CPSF1-210ENST00000532935 SERPINI1Q99574 410 aa14.37□□□□□ -0.11
CPSF1-210ENST00000532935 ZNF717Q9BY31 904 aaPredicted RBP14.37□□□□□ -0.11
CPSF1-210ENST00000532935 SLC29A3Q9BZD2 475 aa14.37□□□□□ -0.11
CPSF1-210ENST00000532935 ADAP2Q9NPF8 381 aa14.37□□□□□ -0.11
CPSF1-210ENST00000532935 EMCNQ9ULC0 261 aa14.37□□□□□ -0.11
CPSF1-210ENST00000532935 NTNG1Q9Y2I2 539 aa14.37□□□□□ -0.11
CPSF1-210ENST00000532935 ASH1LQ9NR48 2969 aaKnown RBP14.37□□□□□ -0.11
CPSF1-210ENST00000532935 ZGRF1Q86YA3 2104 aa14.36□□□□□ -0.11
CPSF1-210ENST00000532935 A0A0A6YYD5 115 aa14.36□□□□□ -0.11
CPSF1-210ENST00000532935 OR5H15A6NDH6 313 aa14.36□□□□□ -0.11
CPSF1-210ENST00000532935 MAN1A2O60476 641 aa14.36□□□□□ -0.11
CPSF1-210ENST00000532935 LDB3O75112 727 aa14.36□□□□□ -0.11
CPSF1-210ENST00000532935 EEDO75530 441 aaKnown RBP14.36□□□□□ -0.11
CPSF1-210ENST00000532935 SEMA3DO95025 777 aa14.36□□□□□ -0.11
CPSF1-210ENST00000532935 IMPDH1P20839 514 aa14.36□□□□□ -0.11
CPSF1-210ENST00000532935 GNLYP22749 145 aa14.36□□□□□ -0.11
CPSF1-210ENST00000532935 BSGP35613 385 aa14.36□□□□□ -0.11
CPSF1-210ENST00000532935 UQCRFS1P47985 274 aa14.36□□□□□ -0.11
CPSF1-210ENST00000532935 STX4Q12846 297 aa14.36□□□□□ -0.11
CPSF1-210ENST00000532935 RPUSD3Q6P087 351 aaKnown RBP14.36□□□□□ -0.11
CPSF1-210ENST00000532935 GPR180Q86V85 440 aa14.36□□□□□ -0.11
CPSF1-210ENST00000532935 LGI4Q8N135 537 aa14.36□□□□□ -0.11
CPSF1-210ENST00000532935 B3GNT7Q8NFL0 401 aa14.36□□□□□ -0.11
CPSF1-210ENST00000532935 OR2W6PQ8NHA6 318 aa14.36□□□□□ -0.11
CPSF1-210ENST00000532935 L3HYPDHQ96EM0 354 aa14.36□□□□□ -0.11
CPSF1-210ENST00000532935 BARD1Q99728 777 aaKnown RBP14.36□□□□□ -0.11
CPSF1-210ENST00000532935 ALOXE3Q9BYJ1 711 aa14.36□□□□□ -0.11
CPSF1-210ENST00000532935 ELOVL6Q9H5J4 265 aa14.36□□□□□ -0.11
CPSF1-210ENST00000532935 CDCP1Q9H5V8 836 aa14.36□□□□□ -0.11
CPSF1-210ENST00000532935 DDX31Q9H8H2 851 aaKnown RBP14.36□□□□□ -0.11
CPSF1-210ENST00000532935 MS4A12Q9NXJ0 267 aa14.36□□□□□ -0.11
CPSF1-210ENST00000532935 ABI3Q9P2A4 366 aa14.36□□□□□ -0.11
CPSF1-210ENST00000532935 TRPS1Q9UHF7 1281 aa14.36□□□□□ -0.11
CPSF1-210ENST00000532935 PHF11Q9UIL8 331 aa14.36□□□□□ -0.11
CPSF1-210ENST00000532935 ZNF225Q9UK10 706 aa14.36□□□□□ -0.11
CPSF1-210ENST00000532935 LRRK2Q5S007 2527 aa14.36□□□□□ -0.11
CPSF1-210ENST00000532935 MYOCOSA0A1B0GUC4 107 aa14.35□□□□□ -0.11
CPSF1-210ENST00000532935 TCP11X1B4DZS4 312 aa14.35□□□□□ -0.11
CPSF1-210ENST00000532935 OR4F21O95013 312 aa14.35□□□□□ -0.11
CPSF1-210ENST00000532935 IFNA16P05015 189 aa14.35□□□□□ -0.11
CPSF1-210ENST00000532935 NUDT17P0C025 328 aa14.35□□□□□ -0.11
CPSF1-210ENST00000532935 CRHR1P34998 444 aa14.35□□□□□ -0.11
CPSF1-210ENST00000532935 CCT5P48643 541 aa14.35□□□□□ -0.11
CPSF1-210ENST00000532935 HNRNPH2P55795 449 aaKnown RBP14.35□□□□□ -0.11
CPSF1-210ENST00000532935 TNFRSF17Q02223 184 aa14.35□□□□□ -0.11
CPSF1-210ENST00000532935 SERTAD2Q14140 314 aa14.35□□□□□ -0.11
CPSF1-210ENST00000532935 ELAVL1Q15717 326 aaKnown RBP14.35□□□□□ -0.11
CPSF1-210ENST00000532935 SGO1Q5FBB7 561 aa14.35□□□□□ -0.11
CPSF1-210ENST00000532935 MRM1Q6IN84 353 aaKnown RBP14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms