RNA–Protein interactions for RNA: ENST00000531727.5

CPSF1-207, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3 BASIC

Gene CPSF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-207ENST00000531727 MSH2P43246 934 aa15.64■□□□□ 0.09
CPSF1-207ENST00000531727 GPR85P60893 370 aa15.64■□□□□ 0.09
CPSF1-207ENST00000531727 CAV1Q03135 178 aa15.64■□□□□ 0.09
CPSF1-207ENST00000531727 STX4Q12846 297 aa15.64■□□□□ 0.09
CPSF1-207ENST00000531727 DLG1Q12959 904 aa15.64■□□□□ 0.09
CPSF1-207ENST00000531727 KBTBD12Q3ZCT8 623 aa15.64■□□□□ 0.09
CPSF1-207ENST00000531727 HSDL2Q6YN16 418 aa15.64■□□□□ 0.09
CPSF1-207ENST00000531727 ZNF793Q6ZN11 406 aa15.64■□□□□ 0.09
CPSF1-207ENST00000531727 RAPH1Q70E73 1250 aa15.64■□□□□ 0.09
CPSF1-207ENST00000531727 UBE3DQ7Z6J8 389 aa15.64■□□□□ 0.09
CPSF1-207ENST00000531727 ISCA2Q86U28 154 aa15.64■□□□□ 0.09
CPSF1-207ENST00000531727 MORN4Q8NDC4 146 aa15.64■□□□□ 0.09
CPSF1-207ENST00000531727 PSD4Q8NDX1 1056 aa15.64■□□□□ 0.09
CPSF1-207ENST00000531727 OR14A16Q8NHC5 309 aa15.64■□□□□ 0.09
CPSF1-207ENST00000531727 FAM57AQ8TBR7 257 aa15.64■□□□□ 0.09
CPSF1-207ENST00000531727 ZNF473Q8WTR7 871 aaKnown RBP15.64■□□□□ 0.09
CPSF1-207ENST00000531727 PTPMT1Q8WUK0 201 aaPredicted RBP15.64■□□□□ 0.09
CPSF1-207ENST00000531727 UBE2E3Q969T4 207 aa15.64■□□□□ 0.09
CPSF1-207ENST00000531727 ALOXE3Q9BYJ1 711 aa15.64■□□□□ 0.09
CPSF1-207ENST00000531727 TRIM8Q9BZR9 551 aa15.64■□□□□ 0.09
CPSF1-207ENST00000531727 HPF1Q9NWY4 346 aa15.64■□□□□ 0.09
CPSF1-207ENST00000531727 NUDT4Q9NZJ9 180 aa15.64■□□□□ 0.09
CPSF1-207ENST00000531727 MYOTQ9UBF9 498 aa15.64■□□□□ 0.09
CPSF1-207ENST00000531727 VTI1BQ9UEU0 232 aa15.64■□□□□ 0.09
CPSF1-207ENST00000531727 ERVK-11Q9UQG0 969 aa15.64■□□□□ 0.09
CPSF1-207ENST00000531727 UTP11Q9Y3A2 253 aaKnown RBP15.64■□□□□ 0.09
CPSF1-207ENST00000531727 MYOCOSA0A1B0GUC4 107 aa15.63■□□□□ 0.09
CPSF1-207ENST00000531727 C19orf84I3L1E1 186 aa15.63■□□□□ 0.09
CPSF1-207ENST00000531727 CDC40O60508 579 aaKnown RBP eCLIP15.63■□□□□ 0.09
CPSF1-207ENST00000531727 OR6B1O95007 311 aa15.63■□□□□ 0.09
CPSF1-207ENST00000531727 SLC35E2BP0CK96 405 aa15.63■□□□□ 0.09
CPSF1-207ENST00000531727 ATP5A1P25705 553 aaKnown RBP15.63■□□□□ 0.09
CPSF1-207ENST00000531727 ELAVL4P26378 380 aaKnown RBP15.63■□□□□ 0.09
CPSF1-207ENST00000531727 CRABP2P29373 138 aa15.63■□□□□ 0.09
CPSF1-207ENST00000531727 PLTPP55058 493 aa15.63■□□□□ 0.09
CPSF1-207ENST00000531727 PCDH1Q08174 1060 aa15.63■□□□□ 0.09
CPSF1-207ENST00000531727 GTF3C1Q12789 2109 aa15.63■□□□□ 0.09
CPSF1-207ENST00000531727 SERTAD2Q14140 314 aa15.63■□□□□ 0.09
CPSF1-207ENST00000531727 SLMAPQ14BN4 828 aa15.63■□□□□ 0.09
CPSF1-207ENST00000531727 TMEM35AQ53FP2 167 aa15.63■□□□□ 0.09
CPSF1-207ENST00000531727 MED27Q6P2C8 311 aa15.63■□□□□ 0.09
CPSF1-207ENST00000531727 CMC1Q7Z7K0 106 aa15.63■□□□□ 0.09
CPSF1-207ENST00000531727 TBC1D1Q86TI0 1168 aaPredicted RBP15.63■□□□□ 0.09
CPSF1-207ENST00000531727 CCDC25Q86WR0 208 aa15.63■□□□□ 0.09
CPSF1-207ENST00000531727 LAS2Q8IYD9 372 aa15.63■□□□□ 0.09
CPSF1-207ENST00000531727 PPM1NQ8N819 430 aa15.63■□□□□ 0.09
CPSF1-207ENST00000531727 ACOT4Q8N9L9 421 aa15.63■□□□□ 0.09
CPSF1-207ENST00000531727 UBTD2Q8WUN7 234 aa15.63■□□□□ 0.09
CPSF1-207ENST00000531727 ASB15Q8WXK1 588 aa15.63■□□□□ 0.09
CPSF1-207ENST00000531727 RASL10BQ96S79 203 aa15.63■□□□□ 0.09
CPSF1-207ENST00000531727 ATOH8Q96SQ7 321 aa15.63■□□□□ 0.09
CPSF1-207ENST00000531727 MAPKAP1Q9BPZ7 522 aa15.63■□□□□ 0.09
CPSF1-207ENST00000531727 LIN28AQ9H9Z2 209 aaKnown RBP15.63■□□□□ 0.09
CPSF1-207ENST00000531727 NMRAL1Q9HBL8 299 aa15.63■□□□□ 0.09
CPSF1-207ENST00000531727 PLSCR2Q9NRY7 297 aa15.63■□□□□ 0.09
CPSF1-207ENST00000531727 OPTCQ9UBM4 332 aa15.63■□□□□ 0.09
CPSF1-207ENST00000531727 PPT2Q9UMR5 302 aa15.63■□□□□ 0.09
CPSF1-207ENST00000531727 SPACA6W5XKT8 324 aa15.63■□□□□ 0.09
CPSF1-207ENST00000531727 SUPT3HB4E1H0 165 aa15.62■□□□□ 0.09
CPSF1-207ENST00000531727 K7EPI3 171 aa15.62■□□□□ 0.09
CPSF1-207ENST00000531727 UBXN8O00124 270 aa15.62■□□□□ 0.09
CPSF1-207ENST00000531727 WWP2O00308 870 aa15.62■□□□□ 0.09
CPSF1-207ENST00000531727 RTCAO00442 366 aaKnown RBP15.62■□□□□ 0.09
CPSF1-207ENST00000531727 KERAO60938 352 aa15.62■□□□□ 0.09
CPSF1-207ENST00000531727 LDB3O75112 727 aa15.62■□□□□ 0.09
CPSF1-207ENST00000531727 SUPT3HO75486 399 aa15.62■□□□□ 0.09
CPSF1-207ENST00000531727 SCELO95171 688 aa15.62■□□□□ 0.09
CPSF1-207ENST00000531727 TPOP07202 933 aa15.62■□□□□ 0.09
CPSF1-207ENST00000531727 PCNAP12004 261 aa15.62■□□□□ 0.09
CPSF1-207ENST00000531727 HIST1H1TP22492 207 aaPredicted RBP15.62■□□□□ 0.09
CPSF1-207ENST00000531727 SERPINB1P30740 379 aa15.62■□□□□ 0.09
CPSF1-207ENST00000531727 STX2P32856 288 aa15.62■□□□□ 0.09
CPSF1-207ENST00000531727 MAGEA4P43358 317 aa15.62■□□□□ 0.09
CPSF1-207ENST00000531727 KIR3DL1P43629 444 aa15.62■□□□□ 0.09
CPSF1-207ENST00000531727 HK2P52789 917 aa15.62■□□□□ 0.09
CPSF1-207ENST00000531727 IL20RBQ6UXL0 311 aa15.62■□□□□ 0.09
CPSF1-207ENST00000531727 CHSY3Q70JA7 882 aa15.62■□□□□ 0.09
CPSF1-207ENST00000531727 CD163Q86VB7 1156 aa15.62■□□□□ 0.09
CPSF1-207ENST00000531727 OR7G3Q8NG95 312 aa15.62■□□□□ 0.09
CPSF1-207ENST00000531727 OR8K3Q8NH51 312 aa15.62■□□□□ 0.09
CPSF1-207ENST00000531727 FBXO25Q8TCJ0 367 aa15.62■□□□□ 0.09
CPSF1-207ENST00000531727 FBF1Q8TES7 1133 aa15.62■□□□□ 0.09
CPSF1-207ENST00000531727 OR8D2Q9GZM6 311 aa15.62■□□□□ 0.09
CPSF1-207ENST00000531727 RAB17Q9H0T7 212 aa15.62■□□□□ 0.09
CPSF1-207ENST00000531727 PRM3Q9NNZ6 103 aa15.62■□□□□ 0.09
CPSF1-207ENST00000531727 IGSF5Q9NSI5 407 aa15.62■□□□□ 0.09
CPSF1-207ENST00000531727 DEPPQ9NTK1 212 aa15.62■□□□□ 0.09
CPSF1-207ENST00000531727 PDZD2O15018 2839 aa15.61■□□□□ 0.09
CPSF1-207ENST00000531727 C17orf105B2RV13 164 aa15.61■□□□□ 0.09
CPSF1-207ENST00000531727 TGFB1P01137 390 aa15.61■□□□□ 0.09
CPSF1-207ENST00000531727 LTA4HP09960 611 aaKnown RBP15.61■□□□□ 0.09
CPSF1-207ENST00000531727 TNNI3P19429 210 aa15.61■□□□□ 0.09
CPSF1-207ENST00000531727 SOX3P41225 446 aa15.61■□□□□ 0.09
CPSF1-207ENST00000531727 SSR2P43308 183 aa15.61■□□□□ 0.09
CPSF1-207ENST00000531727 NAB1Q13506 487 aa15.61■□□□□ 0.09
CPSF1-207ENST00000531727 AP5B1Q2VPB7 878 aa15.61■□□□□ 0.09
CPSF1-207ENST00000531727 KHDRBS2Q5VWX1 349 aaKnown RBP15.61■□□□□ 0.09
CPSF1-207ENST00000531727 GRHL2Q6ISB3 625 aa15.61■□□□□ 0.09
CPSF1-207ENST00000531727 ARHGAP11AQ6P4F7 1023 aa15.61■□□□□ 0.09
CPSF1-207ENST00000531727 ZDHHC24Q6UX98 284 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms