RNA–Protein interactions for RNA: ENST00000531158.1

CHMP4A-205, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 4

Gene CHMP4A, Length 563 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-205ENST00000531158 SARGQ9BW04 601 aa8.57□□□□□ -1.04
CHMP4A-205ENST00000531158 DLL4Q9NR61 685 aa8.57□□□□□ -1.04
CHMP4A-205ENST00000531158 ZNF358Q9NW07 568 aa8.57□□□□□ -1.04
CHMP4A-205ENST00000531158 KLHL42Q9P2K6 505 aa8.57□□□□□ -1.04
CHMP4A-205ENST00000531158 ARL2BPQ9Y2Y0 163 aa8.57□□□□□ -1.04
CHMP4A-205ENST00000531158 FAM215AQ9Y5M1 114 aa8.57□□□□□ -1.04
CHMP4A-205ENST00000531158 LIPGQ9Y5X9 500 aa8.57□□□□□ -1.04
CHMP4A-205ENST00000531158 MED12Q93074 2177 aa8.56□□□□□ -1.04
CHMP4A-205ENST00000531158 A8MUA0 341 aa8.56□□□□□ -1.04
CHMP4A-205ENST00000531158 ZWINTO95229 277 aa8.56□□□□□ -1.04
CHMP4A-205ENST00000531158 SLC35G6P0C7Q6 338 aa8.56□□□□□ -1.04
CHMP4A-205ENST00000531158 ALOX12P18054 663 aa8.56□□□□□ -1.04
CHMP4A-205ENST00000531158 IL10P22301 178 aa8.56□□□□□ -1.04
CHMP4A-205ENST00000531158 GABRB3P28472 473 aa8.56□□□□□ -1.04
CHMP4A-205ENST00000531158 HNRNPFP52597 415 aaKnown RBP8.56□□□□□ -1.04
CHMP4A-205ENST00000531158 FOXD4Q12950 439 aaPredicted RBP8.56□□□□□ -1.04
CHMP4A-205ENST00000531158 PDIA2Q13087 525 aaKnown RBP8.56□□□□□ -1.04
CHMP4A-205ENST00000531158 NAE1Q13564 534 aa8.56□□□□□ -1.04
CHMP4A-205ENST00000531158 SNTB1Q13884 538 aaKnown RBP8.56□□□□□ -1.04
CHMP4A-205ENST00000531158 HERC3Q15034 1050 aa8.56□□□□□ -1.04
CHMP4A-205ENST00000531158 SPDYAQ5MJ70 313 aa8.56□□□□□ -1.04
CHMP4A-205ENST00000531158 LCTLQ6UWM7 567 aa8.56□□□□□ -1.04
CHMP4A-205ENST00000531158 TMEM200AQ86VY9 491 aa8.56□□□□□ -1.04
CHMP4A-205ENST00000531158 C17orf64Q86WR6 236 aa8.56□□□□□ -1.04
CHMP4A-205ENST00000531158 LIX1LQ8IVB5 337 aa8.56□□□□□ -1.04
CHMP4A-205ENST00000531158 ZBED8Q8IZ13 594 aa8.56□□□□□ -1.04
CHMP4A-205ENST00000531158 CYP4X1Q8N118 509 aa8.56□□□□□ -1.04
CHMP4A-205ENST00000531158 PDIK1LQ8N165 341 aa8.56□□□□□ -1.04
CHMP4A-205ENST00000531158 CYP4Z2PQ8N1L4 340 aa8.56□□□□□ -1.04
CHMP4A-205ENST00000531158 ANKRD42Q8N9B4 389 aa8.56□□□□□ -1.04
CHMP4A-205ENST00000531158 ANKRD53Q8N9V6 530 aa8.56□□□□□ -1.04
CHMP4A-205ENST00000531158 POGLUT1Q8NBL1 392 aa8.56□□□□□ -1.04
CHMP4A-205ENST00000531158 TMEM52Q8NDY8 209 aa8.56□□□□□ -1.04
CHMP4A-205ENST00000531158 UTP15Q8TED0 518 aaKnown RBP8.56□□□□□ -1.04
CHMP4A-205ENST00000531158 PWWP2AQ96N64 755 aa8.56□□□□□ -1.04
CHMP4A-205ENST00000531158 PTCHD1Q96NR3 888 aa8.56□□□□□ -1.04
CHMP4A-205ENST00000531158 SMC6Q96SB8 1091 aa8.56□□□□□ -1.04
CHMP4A-205ENST00000531158 NDNQ99608 321 aa8.56□□□□□ -1.04
CHMP4A-205ENST00000531158 ELAC2Q9BQ52 826 aaKnown RBP8.56□□□□□ -1.04
CHMP4A-205ENST00000531158 DEFB127Q9H1M4 99 aa8.56□□□□□ -1.04
CHMP4A-205ENST00000531158 TP63Q9H3D4 680 aaPredicted RBP8.56□□□□□ -1.04
CHMP4A-205ENST00000531158 KLHL31Q9H511 634 aa8.56□□□□□ -1.04
CHMP4A-205ENST00000531158 ACSS3Q9H6R3 686 aa8.56□□□□□ -1.04
CHMP4A-205ENST00000531158 KCNK9Q9NPC2 374 aa8.56□□□□□ -1.04
CHMP4A-205ENST00000531158 PNPLA3Q9NST1 481 aa8.56□□□□□ -1.04
CHMP4A-205ENST00000531158 FGFR1OP2Q9NVK5 253 aa8.56□□□□□ -1.04
CHMP4A-205ENST00000531158 KCNN3Q9UGI6 736 aa8.56□□□□□ -1.04
CHMP4A-205ENST00000531158 IKZF3Q9UKT9 509 aa8.56□□□□□ -1.04
CHMP4A-205ENST00000531158 PPIEQ9UNP9 301 aaKnown RBP8.56□□□□□ -1.04
CHMP4A-205ENST00000531158 RPH3AQ9Y2J0 694 aaPredicted RBP8.56□□□□□ -1.04
CHMP4A-205ENST00000531158 L3MBTL1Q9Y468 752 aa8.56□□□□□ -1.04
CHMP4A-205ENST00000531158 A0A0G2JNJ9 132 aa8.55□□□□□ -1.04
CHMP4A-205ENST00000531158 TRBV11-1A0A0K0K1C0 115 aa8.55□□□□□ -1.04
CHMP4A-205ENST00000531158 FAM237BA0A1B0GVD1 139 aa8.55□□□□□ -1.04
CHMP4A-205ENST00000531158 AP3B1O00203 1094 aa8.55□□□□□ -1.04
CHMP4A-205ENST00000531158 CDK2AP1O14519 115 aa8.55□□□□□ -1.04
CHMP4A-205ENST00000531158 OR1F1O43749 312 aa8.55□□□□□ -1.04
CHMP4A-205ENST00000531158 KLK8O60259 260 aa8.55□□□□□ -1.04
CHMP4A-205ENST00000531158 PRMT3O60678 531 aa8.55□□□□□ -1.04
CHMP4A-205ENST00000531158 ZNF354AO60765 605 aaPredicted RBP8.55□□□□□ -1.04
CHMP4A-205ENST00000531158 ITGA10O75578 1167 aa8.55□□□□□ -1.04
CHMP4A-205ENST00000531158 GSTA2P09210 222 aa8.55□□□□□ -1.04
CHMP4A-205ENST00000531158 SMIM10L1P0DMW3 83 aa8.55□□□□□ -1.04
CHMP4A-205ENST00000531158 FOSL1P15407 271 aa8.55□□□□□ -1.04
CHMP4A-205ENST00000531158 HNRNPH1P31943 449 aaKnown RBP8.55□□□□□ -1.04
CHMP4A-205ENST00000531158 ADH7P40394 386 aa8.55□□□□□ -1.04
CHMP4A-205ENST00000531158 MAGEA3P43357 314 aa8.55□□□□□ -1.04
CHMP4A-205ENST00000531158 CDKN2DP55273 166 aa8.55□□□□□ -1.04
CHMP4A-205ENST00000531158 RAB8AP61006 207 aa8.55□□□□□ -1.04
CHMP4A-205ENST00000531158 CDK16Q00536 496 aa8.55□□□□□ -1.04
CHMP4A-205ENST00000531158 PMPCAQ10713 525 aa8.55□□□□□ -1.04
CHMP4A-205ENST00000531158 FASTKD3Q14CZ7 662 aaKnown RBP8.55□□□□□ -1.04
CHMP4A-205ENST00000531158 PDK4Q16654 411 aa8.55□□□□□ -1.04
CHMP4A-205ENST00000531158 GALNTL6Q49A17 601 aa8.55□□□□□ -1.04
CHMP4A-205ENST00000531158 XKR6Q5GH73 641 aa8.55□□□□□ -1.04
CHMP4A-205ENST00000531158 RBM20Q5T481 1227 aaKnown RBP8.55□□□□□ -1.04
CHMP4A-205ENST00000531158 FBXW10Q5XX13 1052 aa8.55□□□□□ -1.04
CHMP4A-205ENST00000531158 ARHGAP11AQ6P4F7 1023 aa8.55□□□□□ -1.04
CHMP4A-205ENST00000531158 KIAA0408Q6ZU52 694 aa8.55□□□□□ -1.04
CHMP4A-205ENST00000531158 CA13Q8N1Q1 262 aa8.55□□□□□ -1.04
CHMP4A-205ENST00000531158 B3GNT7Q8NFL0 401 aa8.55□□□□□ -1.04
CHMP4A-205ENST00000531158 OR56A3Q8NH54 315 aa8.55□□□□□ -1.04
CHMP4A-205ENST00000531158 NT5CQ8TCD5 201 aa8.55□□□□□ -1.04
CHMP4A-205ENST00000531158 MGARPQ8TDB4 240 aa8.55□□□□□ -1.04
CHMP4A-205ENST00000531158 PYROXD1Q8WU10 500 aa8.55□□□□□ -1.04
CHMP4A-205ENST00000531158 ASB5Q8WWX0 329 aa8.55□□□□□ -1.04
CHMP4A-205ENST00000531158 RND1Q92730 232 aa8.55□□□□□ -1.04
CHMP4A-205ENST00000531158 NEIL2Q969S2 332 aa8.55□□□□□ -1.04
CHMP4A-205ENST00000531158 SMIM10Q96HG1 83 aa8.55□□□□□ -1.04
CHMP4A-205ENST00000531158 FOXC2Q99958 501 aa8.55□□□□□ -1.04
CHMP4A-205ENST00000531158 ZNF559Q9BR84 538 aa8.55□□□□□ -1.04
CHMP4A-205ENST00000531158 AARSD1Q9BTE6 412 aaKnown RBP8.55□□□□□ -1.04
CHMP4A-205ENST00000531158 SLC6A16Q9GZN6 736 aa8.55□□□□□ -1.04
CHMP4A-205ENST00000531158 PCBD2Q9H0N5 130 aa8.55□□□□□ -1.04
CHMP4A-205ENST00000531158 ZDHHC11Q9H8X9 412 aa8.55□□□□□ -1.04
CHMP4A-205ENST00000531158 LIN28AQ9H9Z2 209 aaKnown RBP8.55□□□□□ -1.04
CHMP4A-205ENST00000531158 PARVBQ9HBI1 364 aa8.55□□□□□ -1.04
CHMP4A-205ENST00000531158 KCNJ16Q9NPI9 418 aa8.55□□□□□ -1.04
CHMP4A-205ENST00000531158 CCM2LQ9NUG4 571 aaPredicted RBP8.55□□□□□ -1.04
CHMP4A-205ENST00000531158 KCMF1Q9P0J7 381 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms