RNA–Protein interactions for RNA: ENST00000530893.6

BRCA2-204, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA2, Length 2,011 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-204ENST00000530893 CDK1P06493 297 aa16.39■□□□□ 0.21
BRCA2-204ENST00000530893 TRA2BP62995 288 aaKnown RBP16.39■□□□□ 0.21
BRCA2-204ENST00000530893 DMPKQ09013 629 aa16.39■□□□□ 0.21
BRCA2-204ENST00000530893 MLC1Q15049 377 aa16.39■□□□□ 0.21
BRCA2-204ENST00000530893 SPRED2Q7Z698 418 aa16.39■□□□□ 0.21
BRCA2-204ENST00000530893 ZNF554Q86TJ5 538 aa16.39■□□□□ 0.21
BRCA2-204ENST00000530893 ADGRF3Q8IZF5 1079 aa16.39■□□□□ 0.21
BRCA2-204ENST00000530893 C2orf73Q8N5S3 287 aaPredicted RBP16.39■□□□□ 0.21
BRCA2-204ENST00000530893 C12orf76Q8N812 135 aaPredicted RBP16.39■□□□□ 0.21
BRCA2-204ENST00000530893 RASSF5Q8WWW0 418 aa16.39■□□□□ 0.21
BRCA2-204ENST00000530893 RGMAQ96B86 450 aa16.39■□□□□ 0.21
BRCA2-204ENST00000530893 LGALS12Q96DT0 336 aa16.39■□□□□ 0.21
BRCA2-204ENST00000530893 F2RL3Q96RI0 385 aa16.39■□□□□ 0.21
BRCA2-204ENST00000530893 NIPSNAP1Q9BPW8 284 aa16.39■□□□□ 0.21
BRCA2-204ENST00000530893 MTIF3Q9H2K0 278 aaKnown RBP16.39■□□□□ 0.21
BRCA2-204ENST00000530893 AKIP1Q9NQ31 210 aa16.39■□□□□ 0.21
BRCA2-204ENST00000530893 ACSS1Q9NUB1 689 aaPredicted RBP16.39■□□□□ 0.21
BRCA2-204ENST00000530893 KIAA0100Q14667 2235 aaKnown RBP16.39■□□□□ 0.21
BRCA2-204ENST00000530893 IGLON5A6NGN9 336 aa16.38■□□□□ 0.21
BRCA2-204ENST00000530893 J3QRK9 145 aa16.38■□□□□ 0.21
BRCA2-204ENST00000530893 CD36P16671 472 aa16.38■□□□□ 0.21
BRCA2-204ENST00000530893 GABRB1P18505 474 aa16.38■□□□□ 0.21
BRCA2-204ENST00000530893 CBLP22681 906 aa16.38■□□□□ 0.21
BRCA2-204ENST00000530893 DRD3P35462 400 aa16.38■□□□□ 0.21
BRCA2-204ENST00000530893 TGFBR2P37173 567 aa16.38■□□□□ 0.21
BRCA2-204ENST00000530893 OPRD1P41143 372 aa16.38■□□□□ 0.21
BRCA2-204ENST00000530893 PCBP4P57723 403 aaKnown RBP16.38■□□□□ 0.21
BRCA2-204ENST00000530893 VBP1P61758 197 aa16.38■□□□□ 0.21
BRCA2-204ENST00000530893 TUBA1BP68363 451 aa16.38■□□□□ 0.21
BRCA2-204ENST00000530893 WSCD2Q2TBF2 565 aa16.38■□□□□ 0.21
BRCA2-204ENST00000530893 FBXO43Q4G163 708 aa16.38■□□□□ 0.21
BRCA2-204ENST00000530893 TUBA1AQ71U36 451 aa16.38■□□□□ 0.21
BRCA2-204ENST00000530893 SFTPA1Q8IWL2 248 aa16.38■□□□□ 0.21
BRCA2-204ENST00000530893 TMCO5AQ8N6Q1 288 aa16.38■□□□□ 0.21
BRCA2-204ENST00000530893 PSMA8Q8TAA3 256 aa16.38■□□□□ 0.21
BRCA2-204ENST00000530893 NDNFQ8TB73 568 aa16.38■□□□□ 0.21
BRCA2-204ENST00000530893 ZBED6CLQ96FA7 236 aaPredicted RBP16.38■□□□□ 0.21
BRCA2-204ENST00000530893 SFXN1Q9H9B4 322 aa16.38■□□□□ 0.21
BRCA2-204ENST00000530893 RHBDL2Q9NX52 303 aa16.38■□□□□ 0.21
BRCA2-204ENST00000530893 TAS2R7Q9NYW3 318 aa16.38■□□□□ 0.21
BRCA2-204ENST00000530893 OCM2P0CE71 109 aa16.38■□□□□ 0.21
BRCA2-204ENST00000530893 OCMP0CE72 109 aaPredicted RBP16.38■□□□□ 0.21
BRCA2-204ENST00000530893 EIF2DP41214 584 aaKnown RBP16.38■□□□□ 0.21
BRCA2-204ENST00000530893 IDH2P48735 452 aaKnown RBP16.38■□□□□ 0.21
BRCA2-204ENST00000530893 CDC42P60953 191 aa16.38■□□□□ 0.21
BRCA2-204ENST00000530893 COLEC12Q5KU26 742 aa16.38■□□□□ 0.21
BRCA2-204ENST00000530893 Q6ZPB1 254 aaPredicted RBP16.38■□□□□ 0.21
BRCA2-204ENST00000530893 ZBTB46Q86UZ6 589 aa16.38■□□□□ 0.21
BRCA2-204ENST00000530893 IGFN1Q86VF2 1251 aa16.38■□□□□ 0.21
BRCA2-204ENST00000530893 MMP21Q8N119 569 aa16.38■□□□□ 0.21
BRCA2-204ENST00000530893 TTLQ8NG68 377 aa16.38■□□□□ 0.21
BRCA2-204ENST00000530893 SLC38A5Q8WUX1 472 aa16.38■□□□□ 0.21
BRCA2-204ENST00000530893 APOBEC4Q8WW27 367 aaKnown RBP16.38■□□□□ 0.21
BRCA2-204ENST00000530893 LGR4Q9BXB1 951 aa16.38■□□□□ 0.21
BRCA2-204ENST00000530893 CUEDC1Q9NWM3 386 aaPredicted RBP16.38■□□□□ 0.21
BRCA2-204ENST00000530893 IMPAD1Q9NX62 359 aa16.38■□□□□ 0.21
BRCA2-204ENST00000530893 ALPK3Q96L96 1907 aa16.37■□□□□ 0.21
BRCA2-204ENST00000530893 COL4A3Q01955 1670 aa16.37■□□□□ 0.21
BRCA2-204ENST00000530893 A0A1W2PPV9 198 aa16.37■□□□□ 0.21
BRCA2-204ENST00000530893 SH3D21A4FU49 640 aa16.37■□□□□ 0.21
BRCA2-204ENST00000530893 AXIN1O15169 862 aa16.37■□□□□ 0.21
BRCA2-204ENST00000530893 NDUFS4O43181 175 aa16.37■□□□□ 0.21
BRCA2-204ENST00000530893 CLEC3AO75596 197 aa16.37■□□□□ 0.21
BRCA2-204ENST00000530893 NADKO95544 446 aaPredicted RBP16.37■□□□□ 0.21
BRCA2-204ENST00000530893 LCKP06239 509 aa16.37■□□□□ 0.21
BRCA2-204ENST00000530893 TFPTP0C1Z6 253 aa16.37■□□□□ 0.21
BRCA2-204ENST00000530893 DUSP7Q16829 419 aa16.37■□□□□ 0.21
BRCA2-204ENST00000530893 DUS1LQ6P1R4 473 aaKnown RBP16.37■□□□□ 0.21
BRCA2-204ENST00000530893 ADCK1Q86TW2 530 aa16.37■□□□□ 0.21
BRCA2-204ENST00000530893 CCDC103Q8IW40 242 aa16.37■□□□□ 0.21
BRCA2-204ENST00000530893 CENPSQ8N2Z9 138 aa16.37■□□□□ 0.21
BRCA2-204ENST00000530893 GGHQ92820 318 aa16.37■□□□□ 0.21
BRCA2-204ENST00000530893 COL21A1Q96P44 957 aa16.37■□□□□ 0.21
BRCA2-204ENST00000530893 ALPK1Q96QP1 1244 aa16.37■□□□□ 0.21
BRCA2-204ENST00000530893 TMEM121BQ9BXQ6 578 aaPredicted RBP16.37■□□□□ 0.21
BRCA2-204ENST00000530893 DDX31Q9H8H2 851 aaKnown RBP16.37■□□□□ 0.21
BRCA2-204ENST00000530893 SLAMF7Q9NQ25 335 aa16.37■□□□□ 0.21
BRCA2-204ENST00000530893 ZSCAN32Q9NX65 697 aa16.37■□□□□ 0.21
BRCA2-204ENST00000530893 ZNF226Q9NYT6 803 aa16.37■□□□□ 0.21
BRCA2-204ENST00000530893 C2orf16Q68DN1 1984 aa16.36■□□□□ 0.21
BRCA2-204ENST00000530893 H7BY64 318 aa16.36■□□□□ 0.21
BRCA2-204ENST00000530893 J3KTA2 159 aa16.36■□□□□ 0.21
BRCA2-204ENST00000530893 PCDH17O14917 1159 aa16.36■□□□□ 0.21
BRCA2-204ENST00000530893 IDUAP35475 653 aa16.36■□□□□ 0.21
BRCA2-204ENST00000530893 TRIM23P36406 574 aa16.36■□□□□ 0.21
BRCA2-204ENST00000530893 UGT2B10P36537 528 aa16.36■□□□□ 0.21
BRCA2-204ENST00000530893 MAGEA8P43361 318 aa16.36■□□□□ 0.21
BRCA2-204ENST00000530893 ALDH9A1P49189 494 aa16.36■□□□□ 0.21
BRCA2-204ENST00000530893 CYP4F2P78329 520 aa16.36■□□□□ 0.21
BRCA2-204ENST00000530893 OLR1P78380 273 aa16.36■□□□□ 0.21
BRCA2-204ENST00000530893 RUNX3Q13761 415 aa16.36■□□□□ 0.21
BRCA2-204ENST00000530893 AGBL4Q5VU57 503 aa16.36■□□□□ 0.21
BRCA2-204ENST00000530893 NUDT18Q6ZVK8 323 aa16.36■□□□□ 0.21
BRCA2-204ENST00000530893 TAGAPQ8N103 731 aa16.36■□□□□ 0.21
BRCA2-204ENST00000530893 HORMAD2Q8N7B1 307 aa16.36■□□□□ 0.21
BRCA2-204ENST00000530893 OR9Q2Q8NGE9 314 aa16.36■□□□□ 0.21
BRCA2-204ENST00000530893 PROX1Q92786 737 aa16.36■□□□□ 0.21
BRCA2-204ENST00000530893 PRAP1Q96NZ9 151 aa16.36■□□□□ 0.21
BRCA2-204ENST00000530893 RAB11FIP5Q9BXF6 653 aa16.36■□□□□ 0.21
BRCA2-204ENST00000530893 WDR26Q9H7D7 661 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms