RNA–Protein interactions for RNA: ENST00000528429.5

SOX6-211, Transcript of SRY-box 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SOX6, Length 2,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-211ENST00000528429 RAD21L1Q9H4I0 556 aa7.35□□□□□ -1.23
SOX6-211ENST00000528429 KIR3DX1Q9H7L2 352 aa7.35□□□□□ -1.23
SOX6-211ENST00000528429 LIN28AQ9H9Z2 209 aaKnown RBP7.35□□□□□ -1.23
SOX6-211ENST00000528429 SLC6A20Q9NP91 592 aa7.35□□□□□ -1.23
SOX6-211ENST00000528429 APOBEC3BQ9UH17 382 aaKnown RBP7.35□□□□□ -1.23
SOX6-211ENST00000528429 CLEC4AQ9UMR7 237 aa7.35□□□□□ -1.23
SOX6-211ENST00000528429 NUP214P35658 2090 aaPredicted RBP7.35□□□□□ -1.23
SOX6-211ENST00000528429 ARHGEF17Q96PE2 2063 aaPredicted RBP7.35□□□□□ -1.23
SOX6-211ENST00000528429 MUC3AQ02505 3323 aa7.35□□□□□ -1.23
SOX6-211ENST00000528429 ABCA7Q8IZY2 2146 aa7.35□□□□□ -1.23
SOX6-211ENST00000528429 GABRR3A8MPY1 467 aa7.35□□□□□ -1.23
SOX6-211ENST00000528429 B4DGG1 531 aa7.35□□□□□ -1.23
SOX6-211ENST00000528429 BTN3A3O00478 584 aa7.35□□□□□ -1.23
SOX6-211ENST00000528429 PPM1DO15297 605 aa7.35□□□□□ -1.23
SOX6-211ENST00000528429 CHRM5P08912 532 aaPredicted RBP7.35□□□□□ -1.23
SOX6-211ENST00000528429 PABPC4LP0CB38 370 aaKnown RBP7.35□□□□□ -1.23
SOX6-211ENST00000528429 PIM1P11309 404 aaPredicted RBP7.35□□□□□ -1.23
SOX6-211ENST00000528429 ACPPP15309 386 aa7.35□□□□□ -1.23
SOX6-211ENST00000528429 JUNDP17535 347 aa7.35□□□□□ -1.23
SOX6-211ENST00000528429 POLR2CP19387 275 aaPredicted RBP7.35□□□□□ -1.23
SOX6-211ENST00000528429 PEX2P28328 305 aa7.35□□□□□ -1.23
SOX6-211ENST00000528429 NDUFS1P28331 727 aa7.35□□□□□ -1.23
SOX6-211ENST00000528429 CMPK1P30085 196 aa7.35□□□□□ -1.23
SOX6-211ENST00000528429 EEFSECP57772 596 aaKnown RBP7.35□□□□□ -1.23
SOX6-211ENST00000528429 VBP1P61758 197 aa7.35□□□□□ -1.23
SOX6-211ENST00000528429 C2orf80Q0P641 193 aa7.35□□□□□ -1.23
SOX6-211ENST00000528429 TRAP1Q12931 704 aaKnown RBP7.35□□□□□ -1.23
SOX6-211ENST00000528429 LSAMPQ13449 338 aa7.35□□□□□ -1.23
SOX6-211ENST00000528429 GPR18Q14330 331 aa7.35□□□□□ -1.23
SOX6-211ENST00000528429 CCNYL2Q5T2Q4 361 aa7.35□□□□□ -1.23
SOX6-211ENST00000528429 AADACL4Q5VUY2 407 aa7.35□□□□□ -1.23
SOX6-211ENST00000528429 KHDRBS2Q5VWX1 349 aaKnown RBP7.35□□□□□ -1.23
SOX6-211ENST00000528429 AKAP14Q86UN6 197 aa7.35□□□□□ -1.23
SOX6-211ENST00000528429 PARGQ86W56 976 aa7.35□□□□□ -1.23
SOX6-211ENST00000528429 MSRB3Q8IXL7 192 aa7.35□□□□□ -1.23
SOX6-211ENST00000528429 MMP21Q8N119 569 aa7.35□□□□□ -1.23
SOX6-211ENST00000528429 PQLC1Q8N2U9 271 aa7.35□□□□□ -1.23
SOX6-211ENST00000528429 OR4K1Q8NGD4 311 aa7.35□□□□□ -1.23
SOX6-211ENST00000528429 MAFAQ8NHW3 353 aaPredicted RBP7.35□□□□□ -1.23
SOX6-211ENST00000528429 PNPT1Q8TCS8 783 aaKnown RBP7.35□□□□□ -1.23
SOX6-211ENST00000528429 CANT1Q8WVQ1 401 aa7.35□□□□□ -1.23
SOX6-211ENST00000528429 PPWD1Q96BP3 646 aaKnown RBP7.35□□□□□ -1.23
SOX6-211ENST00000528429 DUSP26Q9BV47 211 aa7.35□□□□□ -1.23
SOX6-211ENST00000528429 IFT22Q9H7X7 185 aa7.35□□□□□ -1.23
SOX6-211ENST00000528429 SERHLQ9NQF3 203 aa7.35□□□□□ -1.23
SOX6-211ENST00000528429 PPP1R14DQ9NXH3 145 aa7.35□□□□□ -1.23
SOX6-211ENST00000528429 MRPL39Q9NYK5 338 aaKnown RBP7.35□□□□□ -1.23
SOX6-211ENST00000528429 MUTYHQ9UIF7 546 aa7.35□□□□□ -1.23
SOX6-211ENST00000528429 SNX13Q9Y5W8 968 aa7.35□□□□□ -1.23
SOX6-211ENST00000528429 COMMD3-BMI1R4GMX3 469 aa7.35□□□□□ -1.23
SOX6-211ENST00000528429 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.34□□□□□ -1.23
SOX6-211ENST00000528429 OR6C74A6NCV1 312 aa7.34□□□□□ -1.23
SOX6-211ENST00000528429 PLPP1O14494 284 aa7.34□□□□□ -1.23
SOX6-211ENST00000528429 C1QCP02747 245 aa7.34□□□□□ -1.23
SOX6-211ENST00000528429 HSMCR30P0CW71 290 aa7.34□□□□□ -1.23
SOX6-211ENST00000528429 SOX6P35712 828 aa7.34□□□□□ -1.23
SOX6-211ENST00000528429 BCL6P41182 706 aa7.34□□□□□ -1.23
SOX6-211ENST00000528429 ALDH9A1P49189 494 aa7.34□□□□□ -1.23
SOX6-211ENST00000528429 MAN2A2P49641 1150 aa7.34□□□□□ -1.23
SOX6-211ENST00000528429 ST13P50502 369 aaKnown RBP7.34□□□□□ -1.23
SOX6-211ENST00000528429 ETV1P50549 477 aa7.34□□□□□ -1.23
SOX6-211ENST00000528429 MAPK12P53778 367 aa7.34□□□□□ -1.23
SOX6-211ENST00000528429 RHDQ02161 417 aa7.34□□□□□ -1.23
SOX6-211ENST00000528429 SRSF11Q05519 484 aaKnown RBP7.34□□□□□ -1.23
SOX6-211ENST00000528429 DPY19L1Q2PZI1 675 aa7.34□□□□□ -1.23
SOX6-211ENST00000528429 FAM209BQ5JX69 171 aa7.34□□□□□ -1.23
SOX6-211ENST00000528429 TMEM164Q5U3C3 297 aa7.34□□□□□ -1.23
SOX6-211ENST00000528429 ZFP1Q6P2D0 407 aa7.34□□□□□ -1.23
SOX6-211ENST00000528429 GALNT18Q6P9A2 607 aa7.34□□□□□ -1.23
SOX6-211ENST00000528429 BORAQ6PGQ7 559 aa7.34□□□□□ -1.23
SOX6-211ENST00000528429 IYDQ6PHW0 289 aa7.34□□□□□ -1.23
SOX6-211ENST00000528429 IZUMO2Q6UXV1 221 aa7.34□□□□□ -1.23
SOX6-211ENST00000528429 WASH2PQ6VEQ5 465 aa7.34□□□□□ -1.23
SOX6-211ENST00000528429 SLC9B2Q86UD5 537 aa7.34□□□□□ -1.23
SOX6-211ENST00000528429 TMEFF1Q8IYR6 380 aa7.34□□□□□ -1.23
SOX6-211ENST00000528429 METTL4Q8N3J2 472 aa7.34□□□□□ -1.23
SOX6-211ENST00000528429 SPEM1Q8N4L4 309 aa7.34□□□□□ -1.23
SOX6-211ENST00000528429 FAM26EQ8N5C1 309 aa7.34□□□□□ -1.23
SOX6-211ENST00000528429 OR2T12Q8NG77 320 aa7.34□□□□□ -1.23
SOX6-211ENST00000528429 FAM110BQ8TC76 370 aa7.34□□□□□ -1.23
SOX6-211ENST00000528429 SLC37A2Q8TED4 501 aa7.34□□□□□ -1.23
SOX6-211ENST00000528429 C16orf78Q8WTQ4 265 aa7.34□□□□□ -1.23
SOX6-211ENST00000528429 FIG4Q92562 907 aa7.34□□□□□ -1.23
SOX6-211ENST00000528429 FCRL4Q96PJ5 515 aa7.34□□□□□ -1.23
SOX6-211ENST00000528429 C17orf62Q9BQA9 187 aa7.34□□□□□ -1.23
SOX6-211ENST00000528429 CENPKQ9BS16 269 aa7.34□□□□□ -1.23
SOX6-211ENST00000528429 MS4A8Q9BY19 250 aa7.34□□□□□ -1.23
SOX6-211ENST00000528429 TRIM15Q9C019 465 aa7.34□□□□□ -1.23
SOX6-211ENST00000528429 PAIP1Q9H074 479 aaKnown RBP7.34□□□□□ -1.23
SOX6-211ENST00000528429 KCNH6Q9H252 994 aa7.34□□□□□ -1.23
SOX6-211ENST00000528429 MIEF1Q9NQG6 463 aa7.34□□□□□ -1.23
SOX6-211ENST00000528429 AHSPQ9NZD4 102 aa7.34□□□□□ -1.23
SOX6-211ENST00000528429 EHD3Q9NZN3 535 aa7.34□□□□□ -1.23
SOX6-211ENST00000528429 OR6C2Q9NZP2 312 aa7.34□□□□□ -1.23
SOX6-211ENST00000528429 BAG5Q9UL15 447 aa7.34□□□□□ -1.23
SOX6-211ENST00000528429 SIT1Q9Y3P8 196 aa7.34□□□□□ -1.23
SOX6-211ENST00000528429 NEUROG3Q9Y4Z2 214 aa7.34□□□□□ -1.23
SOX6-211ENST00000528429 AP4S1Q9Y587 144 aa7.34□□□□□ -1.23
SOX6-211ENST00000528429 DGKBQ9Y6T7 804 aa7.34□□□□□ -1.23
SOX6-211ENST00000528429 TDRD6O60522 2096 aaKnown RBP7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms