RNA–Protein interactions for RNA: ENST00000527920.5

SSSCA1-205, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-205ENST00000527920 OR4C11Q6IEV9 310 aa30.86■■■□□ 2.53
SSSCA1-205ENST00000527920 LCA5Q86VQ0 697 aa30.86■■■□□ 2.53
SSSCA1-205ENST00000527920 PHF21BQ96EK2 531 aa30.86■■■□□ 2.53
SSSCA1-205ENST00000527920 VMP1Q96GC9 406 aa30.86■■■□□ 2.53
SSSCA1-205ENST00000527920 SCMH1Q96GD3 660 aa30.86■■■□□ 2.53
SSSCA1-205ENST00000527920 SIGLEC12Q96PQ1 595 aa30.86■■■□□ 2.53
SSSCA1-205ENST00000527920 MTERF1Q99551 399 aaKnown RBP30.86■■■□□ 2.53
SSSCA1-205ENST00000527920 MAPKAP1Q9BPZ7 522 aa30.86■■■□□ 2.53
SSSCA1-205ENST00000527920 NTMT1Q9BV86 223 aa30.86■■■□□ 2.53
SSSCA1-205ENST00000527920 DEFB126Q9BYW3 111 aa30.86■■■□□ 2.53
SSSCA1-205ENST00000527920 PNO1Q9NRX1 252 aaKnown RBP30.86■■■□□ 2.53
SSSCA1-205ENST00000527920 PCTPQ9UKL6 214 aa30.86■■■□□ 2.53
SSSCA1-205ENST00000527920 SLC5A6Q9Y289 635 aa30.86■■■□□ 2.53
SSSCA1-205ENST00000527920 FOXE1O00358 373 aaPredicted RBP30.85■■■□□ 2.53
SSSCA1-205ENST00000527920 CLDN9O95484 217 aa30.85■■■□□ 2.53
SSSCA1-205ENST00000527920 TRHRP34981 398 aaPredicted RBP30.85■■■□□ 2.53
SSSCA1-205ENST00000527920 RAP1GDS1P52306 607 aa30.85■■■□□ 2.53
SSSCA1-205ENST00000527920 CUL3Q13618 768 aa30.85■■■□□ 2.53
SSSCA1-205ENST00000527920 SERTAD2Q14140 314 aa30.85■■■□□ 2.53
SSSCA1-205ENST00000527920 CPSF6Q16630 551 aaKnown RBP eCLIP30.85■■■□□ 2.53
SSSCA1-205ENST00000527920 ZCCHC7Q8N3Z6 543 aaKnown RBP30.85■■■□□ 2.53
SSSCA1-205ENST00000527920 NOL11Q9H8H0 719 aaKnown RBP30.85■■■□□ 2.53
SSSCA1-205ENST00000527920 MS4A12Q9NXJ0 267 aa30.85■■■□□ 2.53
SSSCA1-205ENST00000527920 VTI1BQ9UEU0 232 aa30.85■■■□□ 2.53
SSSCA1-205ENST00000527920 RNF11Q9Y3C5 154 aa30.85■■■□□ 2.53
SSSCA1-205ENST00000527920 FAM153BP0C7A2 387 aa30.84■■■□□ 2.53
SSSCA1-205ENST00000527920 CD46P15529 392 aa30.84■■■□□ 2.53
SSSCA1-205ENST00000527920 FAM153CQ494X1 144 aa30.84■■■□□ 2.53
SSSCA1-205ENST00000527920 TMEM132CQ8N3T6 1108 aa30.84■■■□□ 2.53
SSSCA1-205ENST00000527920 WDR20Q8TBZ3 569 aa30.84■■■□□ 2.53
SSSCA1-205ENST00000527920 ERRFI1Q9UJM3 462 aaPredicted RBP30.84■■■□□ 2.53
SSSCA1-205ENST00000527920 SVILO95425 2214 aa30.83■■■□□ 2.53
SSSCA1-205ENST00000527920 WIPF3A6NGB9 483 aa30.83■■■□□ 2.53
SSSCA1-205ENST00000527920 PLPP1O14494 284 aa30.83■■■□□ 2.53
SSSCA1-205ENST00000527920 OR7A17O14581 309 aa30.83■■■□□ 2.53
SSSCA1-205ENST00000527920 SH3BGRLO75368 114 aa30.83■■■□□ 2.53
SSSCA1-205ENST00000527920 NEURL1O76050 574 aa30.83■■■□□ 2.53
SSSCA1-205ENST00000527920 GP1BBP13224 206 aa30.83■■■□□ 2.53
SSSCA1-205ENST00000527920 TPP2P29144 1249 aaPredicted RBP30.83■■■□□ 2.53
SSSCA1-205ENST00000527920 PPP2R1BP30154 601 aa30.83■■■□□ 2.53
SSSCA1-205ENST00000527920 OC90Q02509 493 aaPredicted RBP30.83■■■□□ 2.53
SSSCA1-205ENST00000527920 STX4Q12846 297 aa30.83■■■□□ 2.53
SSSCA1-205ENST00000527920 ZRSR2Q15696 482 aaKnown RBP30.83■■■□□ 2.53
SSSCA1-205ENST00000527920 CLNKQ7Z7G1 428 aa30.83■■■□□ 2.53
SSSCA1-205ENST00000527920 RNF175Q8N4F7 328 aa30.83■■■□□ 2.53
SSSCA1-205ENST00000527920 TMEM151AQ8N4L1 468 aa30.83■■■□□ 2.53
SSSCA1-205ENST00000527920 TMEM178AQ8NBL3 297 aa30.83■■■□□ 2.53
SSSCA1-205ENST00000527920 DAZLQ92904 295 aaKnown RBP30.83■■■□□ 2.53
SSSCA1-205ENST00000527920 C5orf34Q96MH7 638 aa30.83■■■□□ 2.53
SSSCA1-205ENST00000527920 C1QTNF3Q9BXJ4 246 aa30.83■■■□□ 2.53
SSSCA1-205ENST00000527920 L2HGDHQ9H9P8 463 aa30.83■■■□□ 2.53
SSSCA1-205ENST00000527920 ANKRD10Q9NXR5 420 aa30.83■■■□□ 2.53
SSSCA1-205ENST00000527920 TRBV11-1A0A0K0K1C0 115 aa30.82■■■□□ 2.52
SSSCA1-205ENST00000527920 SAP18O00422 153 aaKnown RBP30.82■■■□□ 2.52
SSSCA1-205ENST00000527920 FCHO1O14526 889 aa30.82■■■□□ 2.52
SSSCA1-205ENST00000527920 RPS17P08708 135 aaKnown RBP30.82■■■□□ 2.52
SSSCA1-205ENST00000527920 CCNG1P51959 295 aa30.82■■■□□ 2.52
SSSCA1-205ENST00000527920 RPS13P62277 151 aaKnown RBP30.82■■■□□ 2.52
SSSCA1-205ENST00000527920 GGTA1PQ4G0N0 100 aa30.82■■■□□ 2.52
SSSCA1-205ENST00000527920 SPINK14Q6IE38 97 aa30.82■■■□□ 2.52
SSSCA1-205ENST00000527920 OR52B6Q8NGF0 335 aa30.82■■■□□ 2.52
SSSCA1-205ENST00000527920 ATP6V1E2Q96A05 226 aa30.82■■■□□ 2.52
SSSCA1-205ENST00000527920 ALOXE3Q9BYJ1 711 aa30.82■■■□□ 2.52
SSSCA1-205ENST00000527920 ZBTB26Q9HCK0 441 aa30.82■■■□□ 2.52
SSSCA1-205ENST00000527920 LRFN1Q9P244 771 aa30.82■■■□□ 2.52
SSSCA1-205ENST00000527920 PHF11Q9UIL8 331 aa30.82■■■□□ 2.52
SSSCA1-205ENST00000527920 ZNF223Q9UK11 482 aaPredicted RBP30.82■■■□□ 2.52
SSSCA1-205ENST00000527920 CLCA3PQ9Y6N3 262 aa30.82■■■□□ 2.52
SSSCA1-205ENST00000527920 SBK3P0C264 359 aa30.81■■■□□ 2.52
SSSCA1-205ENST00000527920 CPN2P22792 545 aa30.81■■■□□ 2.52
SSSCA1-205ENST00000527920 CYB561P49447 251 aa30.81■■■□□ 2.52
SSSCA1-205ENST00000527920 HLCSP50747 726 aa30.81■■■□□ 2.52
SSSCA1-205ENST00000527920 TRAF3Q13114 568 aa30.81■■■□□ 2.52
SSSCA1-205ENST00000527920 SLAMF1Q13291 335 aa30.81■■■□□ 2.52
SSSCA1-205ENST00000527920 SLC29A2Q14542 456 aa30.81■■■□□ 2.52
SSSCA1-205ENST00000527920 MORN4Q8NDC4 146 aa30.81■■■□□ 2.52
SSSCA1-205ENST00000527920 OR14A16Q8NHC5 309 aa30.81■■■□□ 2.52
SSSCA1-205ENST00000527920 NCLNQ969V3 563 aa30.81■■■□□ 2.52
SSSCA1-205ENST00000527920 ZNF717Q9BY31 904 aaPredicted RBP30.81■■■□□ 2.52
SSSCA1-205ENST00000527920 EPB41L4BQ9H329 900 aa30.81■■■□□ 2.52
SSSCA1-205ENST00000527920 DDX31Q9H8H2 851 aaKnown RBP30.81■■■□□ 2.52
SSSCA1-205ENST00000527920 IQANK1A0A1B0GTG1 560 aa30.8■■■□□ 2.52
SSSCA1-205ENST00000527920 ASPDHA6ND91 283 aa30.8■■■□□ 2.52
SSSCA1-205ENST00000527920 SEMA3DO95025 777 aa30.8■■■□□ 2.52
SSSCA1-205ENST00000527920 LDLRP01130 860 aa30.8■■■□□ 2.52
SSSCA1-205ENST00000527920 IFNA16P05015 189 aa30.8■■■□□ 2.52
SSSCA1-205ENST00000527920 IGLV3-21P80748 117 aaPredicted RBP30.8■■■□□ 2.52
SSSCA1-205ENST00000527920 BIKQ13323 160 aa30.8■■■□□ 2.52
SSSCA1-205ENST00000527920 GPR180Q86V85 440 aa30.8■■■□□ 2.52
SSSCA1-205ENST00000527920 ACMSDQ8TDX5 336 aa30.8■■■□□ 2.52
SSSCA1-205ENST00000527920 PTPMT1Q8WUK0 201 aaPredicted RBP30.8■■■□□ 2.52
SSSCA1-205ENST00000527920 CCDC77Q9BR77 488 aa30.8■■■□□ 2.52
SSSCA1-205ENST00000527920 SORBS1Q9BX66 1292 aaKnown RBP30.8■■■□□ 2.52
SSSCA1-205ENST00000527920 PSMC3IPQ9P2W1 217 aaPredicted RBP30.8■■■□□ 2.52
SSSCA1-205ENST00000527920 FBXW2Q9UKT8 454 aa30.8■■■□□ 2.52
SSSCA1-205ENST00000527920 SP1P08047 785 aa30.79■■■□□ 2.52
SSSCA1-205ENST00000527920 STSP08842 583 aa30.79■■■□□ 2.52
SSSCA1-205ENST00000527920 C4orf17Q53FE4 359 aa30.79■■■□□ 2.52
SSSCA1-205ENST00000527920 ZNF468Q5VIY5 522 aaPredicted RBP30.79■■■□□ 2.52
SSSCA1-205ENST00000527920 FRG2Q64ET8 278 aa30.79■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms