RNA–Protein interactions for RNA: ENST00000526191.1

COPB1-204, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 697 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-204ENST00000526191 C12orf60Q5U649 245 aa4.48□□□□□ -1.69
COPB1-204ENST00000526191 ZNF343Q6P1L6 599 aa4.48□□□□□ -1.69
COPB1-204ENST00000526191 CTR9Q6PD62 1173 aa4.48□□□□□ -1.69
COPB1-204ENST00000526191 SLC25A47Q6Q0C1 308 aa4.48□□□□□ -1.69
COPB1-204ENST00000526191 ZBTB49Q6ZSB9 765 aa4.48□□□□□ -1.69
COPB1-204ENST00000526191 GPRIN3Q6ZVF9 776 aa4.48□□□□□ -1.69
COPB1-204ENST00000526191 DET1Q7L5Y6 550 aa4.48□□□□□ -1.69
COPB1-204ENST00000526191 NUP54Q7Z3B4 507 aa4.48□□□□□ -1.69
COPB1-204ENST00000526191 NUDT13Q86X67 352 aa4.48□□□□□ -1.69
COPB1-204ENST00000526191 LMNTD2Q8IXW0 634 aa4.48□□□□□ -1.69
COPB1-204ENST00000526191 SLC4A11Q8NBS3 891 aa4.48□□□□□ -1.69
COPB1-204ENST00000526191 AFAP1L1Q8TED9 768 aa4.48□□□□□ -1.69
COPB1-204ENST00000526191 ROBO4Q8WZ75 1007 aa4.48□□□□□ -1.69
COPB1-204ENST00000526191 MRPS27Q92552 414 aaKnown RBP4.48□□□□□ -1.69
COPB1-204ENST00000526191 RADILQ96JH8 1075 aa4.48□□□□□ -1.69
COPB1-204ENST00000526191 C10orf90Q96M02 699 aa4.48□□□□□ -1.69
COPB1-204ENST00000526191 NAP1L5Q96NT1 182 aaPredicted RBP4.48□□□□□ -1.69
COPB1-204ENST00000526191 LRRC3BQ96PB8 259 aa4.48□□□□□ -1.69
COPB1-204ENST00000526191 CPNE1Q99829 537 aa4.48□□□□□ -1.69
COPB1-204ENST00000526191 THAP2Q9H0W7 228 aa4.48□□□□□ -1.69
COPB1-204ENST00000526191 ST6GALNAC4Q9H4F1 302 aa4.48□□□□□ -1.69
COPB1-204ENST00000526191 CYP39A1Q9NYL5 469 aa4.48□□□□□ -1.69
COPB1-204ENST00000526191 CPSF3Q9UKF6 684 aaKnown RBP4.48□□□□□ -1.69
COPB1-204ENST00000526191 CCPG1Q9ULG6 757 aa4.48□□□□□ -1.69
COPB1-204ENST00000526191 STUB1Q9UNE7 303 aa4.48□□□□□ -1.69
COPB1-204ENST00000526191 EXOC6BQ9Y2D4 811 aa4.48□□□□□ -1.69
COPB1-204ENST00000526191 CSAG2Q9Y5P2 127 aa4.48□□□□□ -1.69
COPB1-204ENST00000526191 AGRNO00468 2067 aa4.48□□□□□ -1.69
COPB1-204ENST00000526191 CEP250Q9BV73 2442 aa4.47□□□□□ -1.69
COPB1-204ENST00000526191 ACACBO00763 2458 aa4.47□□□□□ -1.69
COPB1-204ENST00000526191 LOC730098B7Z3J9 87 aa4.47□□□□□ -1.69
COPB1-204ENST00000526191 SOCS3O14543 225 aa4.47□□□□□ -1.69
COPB1-204ENST00000526191 NMT2O60551 498 aa4.47□□□□□ -1.69
COPB1-204ENST00000526191 ACSL3O95573 720 aa4.47□□□□□ -1.69
COPB1-204ENST00000526191 CXCL10P02778 98 aa4.47□□□□□ -1.69
COPB1-204ENST00000526191 CD22P20273 847 aa4.47□□□□□ -1.69
COPB1-204ENST00000526191 ACHEP22303 614 aa4.47□□□□□ -1.69
COPB1-204ENST00000526191 PTGER4P35408 488 aa4.47□□□□□ -1.69
COPB1-204ENST00000526191 NBL1P41271 181 aa4.47□□□□□ -1.69
COPB1-204ENST00000526191 ASCL1P50553 236 aa4.47□□□□□ -1.69
COPB1-204ENST00000526191 LIMK1P53667 647 aa4.47□□□□□ -1.69
COPB1-204ENST00000526191 GSCP56915 257 aaPredicted RBP4.47□□□□□ -1.69
COPB1-204ENST00000526191 CAMK2DQ13557 499 aa4.47□□□□□ -1.69
COPB1-204ENST00000526191 UGT3A2Q3SY77 523 aa4.47□□□□□ -1.69
COPB1-204ENST00000526191 OR13C3Q8NGS6 347 aa4.47□□□□□ -1.69
COPB1-204ENST00000526191 NECTIN4Q96NY8 510 aa4.47□□□□□ -1.69
COPB1-204ENST00000526191 GPATCH1Q9BRR8 931 aaKnown RBP4.47□□□□□ -1.69
COPB1-204ENST00000526191 NAA11Q9BSU3 229 aaPredicted RBP4.47□□□□□ -1.69
COPB1-204ENST00000526191 SLC25A23Q9BV35 468 aa4.47□□□□□ -1.69
COPB1-204ENST00000526191 API5Q9BZZ5 524 aaKnown RBP4.47□□□□□ -1.69
COPB1-204ENST00000526191 WWTR1Q9GZV5 400 aa4.47□□□□□ -1.69
COPB1-204ENST00000526191 BOLA2Q9H3K6 86 aa4.47□□□□□ -1.69
COPB1-204ENST00000526191 MFSD1Q9H3U5 465 aa4.47□□□□□ -1.69
COPB1-204ENST00000526191 SLC7A10Q9NS82 523 aa4.47□□□□□ -1.69
COPB1-204ENST00000526191 FAM207AQ9NSI2 230 aaPredicted RBP4.47□□□□□ -1.69
COPB1-204ENST00000526191 OR6C2Q9NZP2 312 aa4.47□□□□□ -1.69
COPB1-204ENST00000526191 TMED3Q9Y3Q3 217 aa4.47□□□□□ -1.69
COPB1-204ENST00000526191 ZNF292O60281 2723 aa4.46□□□□□ -1.69
COPB1-204ENST00000526191 FRYLO94915 3013 aa4.46□□□□□ -1.69
COPB1-204ENST00000526191 A0A1W2PR80 420 aa4.46□□□□□ -1.7
COPB1-204ENST00000526191 RSPH10B2B2RC85 870 aa4.46□□□□□ -1.7
COPB1-204ENST00000526191 EPM2AB3EWF7 344 aa4.46□□□□□ -1.7
COPB1-204ENST00000526191 CLDN4O14493 209 aa4.46□□□□□ -1.7
COPB1-204ENST00000526191 SEC24AO95486 1093 aa4.46□□□□□ -1.7
COPB1-204ENST00000526191 CENPBP07199 599 aaPredicted RBP4.46□□□□□ -1.7
COPB1-204ENST00000526191 CCDC175P0C221 793 aa4.46□□□□□ -1.7
COPB1-204ENST00000526191 OR52Z1P0C646 297 aa4.46□□□□□ -1.7
COPB1-204ENST00000526191 RSPH10BP0C881 870 aa4.46□□□□□ -1.7
COPB1-204ENST00000526191 DARSP14868 501 aaKnown RBP4.46□□□□□ -1.7
COPB1-204ENST00000526191 RBPJQ06330 500 aa4.46□□□□□ -1.7
COPB1-204ENST00000526191 NFATC2Q13469 925 aa4.46□□□□□ -1.7
COPB1-204ENST00000526191 CUL3Q13618 768 aa4.46□□□□□ -1.7
COPB1-204ENST00000526191 USH1GQ495M9 461 aa4.46□□□□□ -1.7
COPB1-204ENST00000526191 C11orf63Q6NUN7 778 aa4.46□□□□□ -1.7
COPB1-204ENST00000526191 MMD2Q8IY49 270 aa4.46□□□□□ -1.7
COPB1-204ENST00000526191 THAP8Q8NA92 274 aa4.46□□□□□ -1.7
COPB1-204ENST00000526191 VN1R2Q8NFZ6 395 aa4.46□□□□□ -1.7
COPB1-204ENST00000526191 OR1L3Q8NH93 324 aa4.46□□□□□ -1.7
COPB1-204ENST00000526191 GTF3AQ92664 365 aaKnown RBP4.46□□□□□ -1.7
COPB1-204ENST00000526191 SPSB1Q96BD6 273 aa4.46□□□□□ -1.7
COPB1-204ENST00000526191 OTUB1Q96FW1 271 aaPredicted RBP4.46□□□□□ -1.7
COPB1-204ENST00000526191 FAM20AQ96MK3 541 aa4.46□□□□□ -1.7
COPB1-204ENST00000526191 AP1M1Q9BXS5 423 aa4.46□□□□□ -1.7
COPB1-204ENST00000526191 MIS12Q9H081 205 aa4.46□□□□□ -1.7
COPB1-204ENST00000526191 GIMAP2Q9UG22 337 aa4.46□□□□□ -1.7
COPB1-204ENST00000526191 Q9Y3F1 56 aa4.46□□□□□ -1.7
COPB1-204ENST00000526191 CHD8Q9HCK8 2581 aa4.46□□□□□ -1.7
COPB1-204ENST00000526191 RAD50Q92878 1312 aa4.46□□□□□ -1.7
COPB1-204ENST00000526191 RALGAPA1Q6GYQ0 2036 aa4.45□□□□□ -1.7
COPB1-204ENST00000526191 ATRXP46100 2492 aa4.45□□□□□ -1.7
COPB1-204ENST00000526191 C2orf81A6NN90 581 aa4.45□□□□□ -1.7
COPB1-204ENST00000526191 C2CD4DB7Z1M9 353 aa4.45□□□□□ -1.7
COPB1-204ENST00000526191 GLRA3O75311 464 aa4.45□□□□□ -1.7
COPB1-204ENST00000526191 SRSF10O75494 262 aaKnown RBP4.45□□□□□ -1.7
COPB1-204ENST00000526191 RECQL5O94762 991 aaPredicted RBP4.45□□□□□ -1.7
COPB1-204ENST00000526191 APOA4P06727 396 aa4.45□□□□□ -1.7
COPB1-204ENST00000526191 LHCGRP22888 699 aa4.45□□□□□ -1.7
COPB1-204ENST00000526191 EEF1B2P24534 225 aaKnown RBP4.45□□□□□ -1.7
COPB1-204ENST00000526191 AZGP1P25311 298 aaKnown RBP4.45□□□□□ -1.7
COPB1-204ENST00000526191 CA8P35219 290 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms