RNA–Protein interactions for RNA: ENST00000525970.5

CSDE1-211, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 503 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-211ENST00000525970 OVGP1Q12889 678 aa4□□□□□ -1.77
CSDE1-211ENST00000525970 OR1C1Q15619 314 aa4□□□□□ -1.77
CSDE1-211ENST00000525970 CARTPTQ16568 116 aa4□□□□□ -1.77
CSDE1-211ENST00000525970 ZNF718Q3SXZ3 478 aa4□□□□□ -1.77
CSDE1-211ENST00000525970 ZNF672Q499Z4 452 aaPredicted RBP4□□□□□ -1.77
CSDE1-211ENST00000525970 GPAT3Q53EU6 434 aa4□□□□□ -1.77
CSDE1-211ENST00000525970 AGKQ53H12 422 aa4□□□□□ -1.77
CSDE1-211ENST00000525970 LCN1P1Q5VSP4 162 aa4□□□□□ -1.77
CSDE1-211ENST00000525970 GFI1BQ5VTD9 330 aa4□□□□□ -1.77
CSDE1-211ENST00000525970 IL23RQ5VWK5 629 aa4□□□□□ -1.77
CSDE1-211ENST00000525970 HIST2H2AA3Q6FI13 130 aa4□□□□□ -1.77
CSDE1-211ENST00000525970 TMEM207Q6UWW9 146 aa4□□□□□ -1.77
CSDE1-211ENST00000525970 BNIPLQ7Z465 357 aa4□□□□□ -1.77
CSDE1-211ENST00000525970 CUZD1Q86UP6 607 aa4□□□□□ -1.77
CSDE1-211ENST00000525970 GANCQ8TET4 914 aa4□□□□□ -1.77
CSDE1-211ENST00000525970 CHPT1Q8WUD6 406 aa4□□□□□ -1.77
CSDE1-211ENST00000525970 NCLNQ969V3 563 aa4□□□□□ -1.77
CSDE1-211ENST00000525970 LPAR4Q99677 370 aa4□□□□□ -1.77
CSDE1-211ENST00000525970 AGPAT1Q99943 283 aa4□□□□□ -1.77
CSDE1-211ENST00000525970 UBAC1Q9BSL1 405 aa4□□□□□ -1.77
CSDE1-211ENST00000525970 CARD6Q9BX69 1037 aa4□□□□□ -1.77
CSDE1-211ENST00000525970 ACTR8Q9H981 624 aa4□□□□□ -1.77
CSDE1-211ENST00000525970 ECHDC1Q9NTX5 307 aa4□□□□□ -1.77
CSDE1-211ENST00000525970 STAU2Q9NUL3 570 aaKnown RBP eCLIP4□□□□□ -1.77
CSDE1-211ENST00000525970 RNF186Q9NXI6 227 aa4□□□□□ -1.77
CSDE1-211ENST00000525970 TECRQ9NZ01 308 aaKnown RBP4□□□□□ -1.77
CSDE1-211ENST00000525970 C19orf25Q9UFG5 118 aaPredicted RBP4□□□□□ -1.77
CSDE1-211ENST00000525970 LAMP5Q9UJQ1 280 aa4□□□□□ -1.77
CSDE1-211ENST00000525970 RABL2BQ9UNT1 228 aa4□□□□□ -1.77
CSDE1-211ENST00000525970 KIF3AQ9Y496 699 aa4□□□□□ -1.77
CSDE1-211ENST00000525970 CUX2O14529 1486 aa3.99□□□□□ -1.77
CSDE1-211ENST00000525970 MSGN1A6NI15 193 aa3.99□□□□□ -1.77
CSDE1-211ENST00000525970 C16orf97H3BN30 126 aa3.99□□□□□ -1.77
CSDE1-211ENST00000525970 CYTIPO60759 359 aa3.99□□□□□ -1.77
CSDE1-211ENST00000525970 HMMRO75330 724 aa3.99□□□□□ -1.77
CSDE1-211ENST00000525970 CSO75390 466 aaKnown RBP3.99□□□□□ -1.77
CSDE1-211ENST00000525970 ZNF432O94892 652 aa3.99□□□□□ -1.77
CSDE1-211ENST00000525970 NADKO95544 446 aaPredicted RBP3.99□□□□□ -1.77
CSDE1-211ENST00000525970 PAK4O96013 591 aaPredicted RBP3.99□□□□□ -1.77
CSDE1-211ENST00000525970 IGKV3-20P01619 116 aa3.99□□□□□ -1.77
CSDE1-211ENST00000525970 PROS1P07225 676 aa3.99□□□□□ -1.77
CSDE1-211ENST00000525970 RALAP11233 206 aa3.99□□□□□ -1.77
CSDE1-211ENST00000525970 GNSP15586 552 aa3.99□□□□□ -1.77
CSDE1-211ENST00000525970 RPS2P15880 293 aaKnown RBP3.99□□□□□ -1.77
CSDE1-211ENST00000525970 CYP2F1P24903 491 aa3.99□□□□□ -1.77
CSDE1-211ENST00000525970 CEACAM8P31997 349 aaPredicted RBP3.99□□□□□ -1.77
CSDE1-211ENST00000525970 PRDX2P32119 198 aa3.99□□□□□ -1.77
CSDE1-211ENST00000525970 SLC1A3P43003 542 aa3.99□□□□□ -1.77
CSDE1-211ENST00000525970 MTTPP55157 894 aa3.99□□□□□ -1.77
CSDE1-211ENST00000525970 HSF2Q03933 536 aa3.99□□□□□ -1.77
CSDE1-211ENST00000525970 CNTN1Q12860 1018 aa3.99□□□□□ -1.77
CSDE1-211ENST00000525970 SGCGQ13326 291 aa3.99□□□□□ -1.77
CSDE1-211ENST00000525970 EXOSC7Q15024 291 aaKnown RBP3.99□□□□□ -1.77
CSDE1-211ENST00000525970 DUSP5Q16690 384 aa3.99□□□□□ -1.77
CSDE1-211ENST00000525970 ADPRMQ3LIE5 342 aa3.99□□□□□ -1.77
CSDE1-211ENST00000525970 LRRC37A5PQ49AS3 106 aa3.99□□□□□ -1.77
CSDE1-211ENST00000525970 CEP55Q53EZ4 464 aa3.99□□□□□ -1.77
CSDE1-211ENST00000525970 CMPK2Q5EBM0 449 aa3.99□□□□□ -1.77
CSDE1-211ENST00000525970 FAM76BQ5HYJ3 339 aa3.99□□□□□ -1.77
CSDE1-211ENST00000525970 WDR38Q5JTN6 314 aa3.99□□□□□ -1.77
CSDE1-211ENST00000525970 CAPN13Q6MZZ7 669 aaPredicted RBP3.99□□□□□ -1.77
CSDE1-211ENST00000525970 CES3Q6UWW8 571 aa3.99□□□□□ -1.77
CSDE1-211ENST00000525970 TMEM64Q6YI46 380 aa3.99□□□□□ -1.77
CSDE1-211ENST00000525970 FCRLAQ7L513 359 aa3.99□□□□□ -1.77
CSDE1-211ENST00000525970 UNC5CLQ8IV45 518 aa3.99□□□□□ -1.77
CSDE1-211ENST00000525970 CIARTQ8N365 385 aaPredicted RBP3.99□□□□□ -1.77
CSDE1-211ENST00000525970 METTL27Q8N6F8 245 aaPredicted RBP3.99□□□□□ -1.77
CSDE1-211ENST00000525970 FADS6Q8N9I5 356 aa3.99□□□□□ -1.77
CSDE1-211ENST00000525970 COLGALT1Q8NBJ5 622 aa3.99□□□□□ -1.77
CSDE1-211ENST00000525970 KLHDC9Q8NEP7 349 aa3.99□□□□□ -1.77
CSDE1-211ENST00000525970 GPRC5AQ8NFJ5 357 aa3.99□□□□□ -1.77
CSDE1-211ENST00000525970 OR6M1Q8NGM8 313 aa3.99□□□□□ -1.77
CSDE1-211ENST00000525970 OR13C5Q8NGS8 318 aa3.99□□□□□ -1.77
CSDE1-211ENST00000525970 OR4C3Q8NH37 302 aa3.99□□□□□ -1.77
CSDE1-211ENST00000525970 CASP10Q92851 521 aa3.99□□□□□ -1.77
CSDE1-211ENST00000525970 SENP5Q96HI0 755 aaPredicted RBP3.99□□□□□ -1.77
CSDE1-211ENST00000525970 DOCK7Q96N67 2140 aa3.99□□□□□ -1.77
CSDE1-211ENST00000525970 FICDQ9BVA6 458 aa3.99□□□□□ -1.77
CSDE1-211ENST00000525970 MRPL13Q9BYD1 178 aaKnown RBP3.99□□□□□ -1.77
CSDE1-211ENST00000525970 RAB33BQ9H082 229 aa3.99□□□□□ -1.77
CSDE1-211ENST00000525970 SLC26A1Q9H2B4 701 aa3.99□□□□□ -1.77
CSDE1-211ENST00000525970 VAT1LQ9HCJ6 419 aa3.99□□□□□ -1.77
CSDE1-211ENST00000525970 HPS4Q9NQG7 708 aa3.99□□□□□ -1.77
CSDE1-211ENST00000525970 INTS9Q9NV88 658 aaKnown RBP3.99□□□□□ -1.77
CSDE1-211ENST00000525970 PLEK2Q9NYT0 353 aa3.99□□□□□ -1.77
CSDE1-211ENST00000525970 VPS54Q9P1Q0 977 aa3.99□□□□□ -1.77
CSDE1-211ENST00000525970 RRP15Q9Y3B9 282 aaKnown RBP3.99□□□□□ -1.77
CSDE1-211ENST00000525970 ATG4BQ9Y4P1 393 aa3.99□□□□□ -1.77
CSDE1-211ENST00000525970 OR1A2Q9Y585 309 aa3.99□□□□□ -1.77
CSDE1-211ENST00000525970 IKBKGQ9Y6K9 419 aa3.99□□□□□ -1.77
CSDE1-211ENST00000525970 ABCC4O15439 1325 aa3.98□□□□□ -1.77
CSDE1-211ENST00000525970 NEDD4P46934 1319 aa3.98□□□□□ -1.77
CSDE1-211ENST00000525970 A0A087WZ39 114 aa3.98□□□□□ -1.77
CSDE1-211ENST00000525970 TRBV4-1A0A0J9YWV2 114 aa3.98□□□□□ -1.77
CSDE1-211ENST00000525970 FAM230AA0A1W2PPH8 454 aa3.98□□□□□ -1.77
CSDE1-211ENST00000525970 CLRN2A0PK11 232 aa3.98□□□□□ -1.77
CSDE1-211ENST00000525970 NKX6-3A6NJ46 265 aa3.98□□□□□ -1.77
CSDE1-211ENST00000525970 LMO7DNF2Z398 122 aa3.98□□□□□ -1.77
CSDE1-211ENST00000525970 PDXKO00764 312 aa3.98□□□□□ -1.77
CSDE1-211ENST00000525970 MCF2LO15068 1137 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms