RNA–Protein interactions for RNA: ENST00000525284.5

LRRK1-202, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 6,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-202ENST00000525284 OR10T2Q8NGX3 314 aa13.19□□□□□ -0.3
LRRK1-202ENST00000525284 CNIH3Q8TBE1 160 aa13.19□□□□□ -0.3
LRRK1-202ENST00000525284 SOCS4Q8WXH5 440 aa13.19□□□□□ -0.3
LRRK1-202ENST00000525284 PGAM5Q96HS1 289 aa13.19□□□□□ -0.3
LRRK1-202ENST00000525284 CDC6Q99741 560 aa13.19□□□□□ -0.3
LRRK1-202ENST00000525284 SLC25A51Q9H1U9 297 aa13.19□□□□□ -0.3
LRRK1-202ENST00000525284 TCEAL2Q9H3H9 227 aaPredicted RBP13.19□□□□□ -0.3
LRRK1-202ENST00000525284 FN3KRPQ9HA64 309 aa13.19□□□□□ -0.3
LRRK1-202ENST00000525284 RPH3ALQ9UNE2 315 aa13.19□□□□□ -0.3
LRRK1-202ENST00000525284 MEIS3P2A8K0S8 358 aa13.19□□□□□ -0.3
LRRK1-202ENST00000525284 ANKRD28O15084 1053 aa13.19□□□□□ -0.3
LRRK1-202ENST00000525284 ITM2AO43736 263 aa13.19□□□□□ -0.3
LRRK1-202ENST00000525284 CPNE6O95741 557 aa13.19□□□□□ -0.3
LRRK1-202ENST00000525284 MAOAP21397 527 aa13.19□□□□□ -0.3
LRRK1-202ENST00000525284 UGCGQ16739 394 aa13.19□□□□□ -0.3
LRRK1-202ENST00000525284 AURKBQ96GD4 344 aaPredicted RBP13.19□□□□□ -0.3
LRRK1-202ENST00000525284 HS6ST2Q96MM7 605 aa13.19□□□□□ -0.3
LRRK1-202ENST00000525284 BTBD2Q9BX70 525 aa13.19□□□□□ -0.3
LRRK1-202ENST00000525284 DUS2Q9NX74 493 aaKnown RBP13.19□□□□□ -0.3
LRRK1-202ENST00000525284 CREG1O75629 220 aa13.19□□□□□ -0.3
LRRK1-202ENST00000525284 IRF2P14316 349 aa13.19□□□□□ -0.3
LRRK1-202ENST00000525284 GTF2BQ00403 316 aa13.19□□□□□ -0.3
LRRK1-202ENST00000525284 TAF1AQ15573 450 aaPredicted RBP13.19□□□□□ -0.3
LRRK1-202ENST00000525284 C9orf131Q5VYM1 1079 aa13.19□□□□□ -0.3
LRRK1-202ENST00000525284 TLDC1Q6P9B6 456 aa13.19□□□□□ -0.3
LRRK1-202ENST00000525284 TRAM1L1Q8N609 369 aa13.19□□□□□ -0.3
LRRK1-202ENST00000525284 PXYLP1Q8TE99 480 aa13.19□□□□□ -0.3
LRRK1-202ENST00000525284 BIRC7Q96CA5 298 aa13.19□□□□□ -0.3
LRRK1-202ENST00000525284 HYLS1Q96M11 299 aa13.19□□□□□ -0.3
LRRK1-202ENST00000525284 TMEM74Q96NL1 305 aa13.19□□□□□ -0.3
LRRK1-202ENST00000525284 PAK1IP1Q9NWT1 392 aaPredicted RBP13.19□□□□□ -0.3
LRRK1-202ENST00000525284 GPRC5BQ9NZH0 403 aa13.19□□□□□ -0.3
LRRK1-202ENST00000525284 CDC14AQ9UNH5 594 aa13.19□□□□□ -0.3
LRRK1-202ENST00000525284 CFAP20Q9Y6A4 193 aaKnown RBP13.19□□□□□ -0.3
LRRK1-202ENST00000525284 NEMP2A6NFY4 417 aa13.19□□□□□ -0.3
LRRK1-202ENST00000525284 IMPA2O14732 288 aa13.19□□□□□ -0.3
LRRK1-202ENST00000525284 ATG12O94817 140 aa13.19□□□□□ -0.3
LRRK1-202ENST00000525284 DRD5P21918 477 aa13.19□□□□□ -0.3
LRRK1-202ENST00000525284 VEGFCP49767 419 aa13.19□□□□□ -0.3
LRRK1-202ENST00000525284 BCL2L15Q5TBC7 163 aa13.19□□□□□ -0.3
LRRK1-202ENST00000525284 TANGO2Q6ICL3 276 aa13.19□□□□□ -0.3
LRRK1-202ENST00000525284 ZNF367Q7RTV3 350 aa13.19□□□□□ -0.3
LRRK1-202ENST00000525284 WDR53Q7Z5U6 358 aaPredicted RBP13.19□□□□□ -0.3
LRRK1-202ENST00000525284 TTPALQ9BTX7 342 aa13.19□□□□□ -0.3
LRRK1-202ENST00000525284 SACM1LQ9NTJ5 587 aa13.19□□□□□ -0.3
LRRK1-202ENST00000525284 SCML2Q9UQR0 700 aa13.19□□□□□ -0.3
LRRK1-202ENST00000525284 GBAP04062 536 aa13.19□□□□□ -0.3
LRRK1-202ENST00000525284 CD48P09326 243 aa13.19□□□□□ -0.3
LRRK1-202ENST00000525284 ACP5P13686 325 aa13.19□□□□□ -0.3
LRRK1-202ENST00000525284 TMEM11P17152 192 aa13.19□□□□□ -0.3
LRRK1-202ENST00000525284 RIPPLY1Q0D2K3 151 aa13.19□□□□□ -0.3
LRRK1-202ENST00000525284 OR5H2Q8NGV7 314 aa13.19□□□□□ -0.3
LRRK1-202ENST00000525284 FAM46BQ96A09 425 aa13.19□□□□□ -0.3
LRRK1-202ENST00000525284 ZNF75AQ96N20 296 aa13.19□□□□□ -0.3
LRRK1-202ENST00000525284 LRFN5Q96NI6 719 aa13.19□□□□□ -0.3
LRRK1-202ENST00000525284 INPP4AQ96PE3 977 aaPredicted RBP13.19□□□□□ -0.3
LRRK1-202ENST00000525284 P2RY13Q9BPV8 354 aa13.19□□□□□ -0.3
LRRK1-202ENST00000525284 PSD2Q9BQI7 771 aa13.19□□□□□ -0.3
LRRK1-202ENST00000525284 RAB11FIP5Q9BXF6 653 aa13.19□□□□□ -0.3
LRRK1-202ENST00000525284 NPIPA2E9PIF3 369 aa13.18□□□□□ -0.3
LRRK1-202ENST00000525284 NPIPA3F8WFD2 350 aa13.18□□□□□ -0.3
LRRK1-202ENST00000525284 POU4F3Q15319 338 aa13.18□□□□□ -0.3
LRRK1-202ENST00000525284 C9orf57Q5W0N0 161 aa13.18□□□□□ -0.3
LRRK1-202ENST00000525284 ENPP7Q6UWV6 458 aa13.18□□□□□ -0.3
LRRK1-202ENST00000525284 METTL4Q8N3J2 472 aa13.18□□□□□ -0.3
LRRK1-202ENST00000525284 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.18□□□□□ -0.3
LRRK1-202ENST00000525284 MYEF2Q9P2K5 600 aaKnown RBP13.18□□□□□ -0.3
LRRK1-202ENST00000525284 MGAT4BQ9UQ53 548 aa13.18□□□□□ -0.3
LRRK1-202ENST00000525284 DEPDC5O75140 1603 aa13.18□□□□□ -0.3
LRRK1-202ENST00000525284 CFIP05156 583 aa13.18□□□□□ -0.3
LRRK1-202ENST00000525284 ACTR1BP42025 376 aa13.18□□□□□ -0.3
LRRK1-202ENST00000525284 DPP6P42658 865 aa13.18□□□□□ -0.3
LRRK1-202ENST00000525284 ACTR1AP61163 376 aa13.18□□□□□ -0.3
LRRK1-202ENST00000525284 CAPSQ13938 189 aa13.18□□□□□ -0.3
LRRK1-202ENST00000525284 SPIN4Q56A73 249 aa13.18□□□□□ -0.3
LRRK1-202ENST00000525284 PLEKHG7Q6ZR37 379 aa13.18□□□□□ -0.3
LRRK1-202ENST00000525284 GPR155Q7Z3F1 870 aa13.18□□□□□ -0.3
LRRK1-202ENST00000525284 ZNF695Q8IW36 515 aa13.18□□□□□ -0.3
LRRK1-202ENST00000525284 CNOT9Q92600 299 aaKnown RBP13.18□□□□□ -0.3
LRRK1-202ENST00000525284 MROQ9BYG7 248 aa13.18□□□□□ -0.3
LRRK1-202ENST00000525284 DNAJC5Q9H3Z4 198 aa13.18□□□□□ -0.3
LRRK1-202ENST00000525284 TLE6Q9H808 572 aa13.18□□□□□ -0.3
LRRK1-202ENST00000525284 KIDINS220Q9ULH0 1771 aa13.18□□□□□ -0.3
LRRK1-202ENST00000525284 OR6C75A6NL08 312 aa13.18□□□□□ -0.3
LRRK1-202ENST00000525284 RFPL2O75678 378 aa13.18□□□□□ -0.3
LRRK1-202ENST00000525284 SIX3O95343 332 aaPredicted RBP13.18□□□□□ -0.3
LRRK1-202ENST00000525284 FGF19O95750 216 aa13.18□□□□□ -0.3
LRRK1-202ENST00000525284 GGT2P36268 569 aa13.18□□□□□ -0.3
LRRK1-202ENST00000525284 PDSS2Q86YH6 399 aa13.18□□□□□ -0.3
LRRK1-202ENST00000525284 GATSQ8NAP1 163 aa13.18□□□□□ -0.3
LRRK1-202ENST00000525284 OR2A12Q8NGT7 310 aa13.18□□□□□ -0.3
LRRK1-202ENST00000525284 PAQR8Q8TEZ7 354 aa13.18□□□□□ -0.3
LRRK1-202ENST00000525284 CPXM1Q96SM3 734 aa13.18□□□□□ -0.3
LRRK1-202ENST00000525284 GOLGA2P5Q9HBQ8 144 aa13.18□□□□□ -0.3
LRRK1-202ENST00000525284 TEX10Q9NXF1 929 aaPredicted RBP13.18□□□□□ -0.3
LRRK1-202ENST00000525284 NLKQ9UBE8 527 aa13.18□□□□□ -0.3
LRRK1-202ENST00000525284 MATN3O15232 486 aa13.18□□□□□ -0.3
LRRK1-202ENST00000525284 SYNGR4O95473 234 aa13.18□□□□□ -0.3
LRRK1-202ENST00000525284 PCSK2P16519 638 aa13.18□□□□□ -0.3
LRRK1-202ENST00000525284 GSK3BP49841 420 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms