RNA–Protein interactions for RNA: ENST00000524827.5

CSTF3-206, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 3 BASIC

Gene CSTF3, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-206ENST00000524827 PAMR1Q6UXH9 720 aa12.79□□□□□ -0.36
CSTF3-206ENST00000524827 CNTN4Q8IWV2 1026 aa12.79□□□□□ -0.36
CSTF3-206ENST00000524827 KLHDC8AQ8IYD2 350 aa12.79□□□□□ -0.36
CSTF3-206ENST00000524827 GPATCH11Q8N954 259 aa12.79□□□□□ -0.36
CSTF3-206ENST00000524827 NAT8LQ8N9F0 302 aa12.79□□□□□ -0.36
CSTF3-206ENST00000524827 RELL2Q8NC24 303 aaPredicted RBP12.79□□□□□ -0.36
CSTF3-206ENST00000524827 MORN4Q8NDC4 146 aa12.79□□□□□ -0.36
CSTF3-206ENST00000524827 GOT1L1Q8NHS2 421 aaPredicted RBP12.79□□□□□ -0.36
CSTF3-206ENST00000524827 GABPB2Q8TAK5 448 aaPredicted RBP12.79□□□□□ -0.36
CSTF3-206ENST00000524827 PTPMT1Q8WUK0 201 aaPredicted RBP12.79□□□□□ -0.36
CSTF3-206ENST00000524827 CCT6BQ92526 530 aa12.79□□□□□ -0.36
CSTF3-206ENST00000524827 DAZLQ92904 295 aaKnown RBP12.79□□□□□ -0.36
CSTF3-206ENST00000524827 MBD6Q96DN6 1003 aa12.79□□□□□ -0.36
CSTF3-206ENST00000524827 SGCZQ96LD1 299 aa12.79□□□□□ -0.36
CSTF3-206ENST00000524827 QRFPRQ96P65 431 aa12.79□□□□□ -0.36
CSTF3-206ENST00000524827 OR8D2Q9GZM6 311 aa12.79□□□□□ -0.36
CSTF3-206ENST00000524827 RBSNQ9H1K0 784 aa12.79□□□□□ -0.36
CSTF3-206ENST00000524827 LDAHQ9H6V9 325 aa12.79□□□□□ -0.36
CSTF3-206ENST00000524827 EXO5Q9H790 373 aa12.79□□□□□ -0.36
CSTF3-206ENST00000524827 SEMA4BQ9NPR2 832 aaPredicted RBP12.79□□□□□ -0.36
CSTF3-206ENST00000524827 SACM1LQ9NTJ5 587 aa12.79□□□□□ -0.36
CSTF3-206ENST00000524827 ATG4BQ9Y4P1 393 aa12.79□□□□□ -0.36
CSTF3-206ENST00000524827 JMJD1CQ15652 2540 aa12.79□□□□□ -0.36
CSTF3-206ENST00000524827 MPDZO75970 2070 aa12.78□□□□□ -0.36
CSTF3-206ENST00000524827 TRGV5A0A0B4J1U4 118 aa12.78□□□□□ -0.36
CSTF3-206ENST00000524827 LRIT2A6NDA9 550 aa12.78□□□□□ -0.36
CSTF3-206ENST00000524827 SYNDIG1LA6NDD5 238 aa12.78□□□□□ -0.36
CSTF3-206ENST00000524827 SYT5O00445 386 aa12.78□□□□□ -0.36
CSTF3-206ENST00000524827 CYR61O00622 381 aa12.78□□□□□ -0.36
CSTF3-206ENST00000524827 HCN1O60741 890 aa12.78□□□□□ -0.36
CSTF3-206ENST00000524827 P04436 131 aa12.78□□□□□ -0.36
CSTF3-206ENST00000524827 GABRA1P14867 456 aa12.78□□□□□ -0.36
CSTF3-206ENST00000524827 CERS1P27544 350 aa12.78□□□□□ -0.36
CSTF3-206ENST00000524827 PLA2G16P53816 162 aa12.78□□□□□ -0.36
CSTF3-206ENST00000524827 RNF4P78317 190 aa12.78□□□□□ -0.36
CSTF3-206ENST00000524827 LTBQ06643 244 aa12.78□□□□□ -0.36
CSTF3-206ENST00000524827 OPN5Q6U736 354 aa12.78□□□□□ -0.36
CSTF3-206ENST00000524827 SEM1Q6ZVN7 128 aa12.78□□□□□ -0.36
CSTF3-206ENST00000524827 CAMKMTQ7Z624 323 aa12.78□□□□□ -0.36
CSTF3-206ENST00000524827 SPC24Q8NBT2 197 aa12.78□□□□□ -0.36
CSTF3-206ENST00000524827 TTLQ8NG68 377 aa12.78□□□□□ -0.36
CSTF3-206ENST00000524827 OR8K3Q8NH51 312 aa12.78□□□□□ -0.36
CSTF3-206ENST00000524827 OR14A16Q8NHC5 309 aa12.78□□□□□ -0.36
CSTF3-206ENST00000524827 FAM222BQ8WU58 562 aa12.78□□□□□ -0.36
CSTF3-206ENST00000524827 MAGOHBQ96A72 148 aaKnown RBP12.78□□□□□ -0.36
CSTF3-206ENST00000524827 SH3GL2Q99962 352 aa12.78□□□□□ -0.36
CSTF3-206ENST00000524827 CBLCQ9ULV8 474 aa12.78□□□□□ -0.36
CSTF3-206ENST00000524827 FN1P02751 2386 aaKnown RBP12.77□□□□□ -0.36
CSTF3-206ENST00000524827 A0A088AWK7 358 aa12.77□□□□□ -0.37
CSTF3-206ENST00000524827 NPEPPSL1A6NEC2 478 aa12.77□□□□□ -0.37
CSTF3-206ENST00000524827 CTNSO60931 367 aa12.77□□□□□ -0.37
CSTF3-206ENST00000524827 BANF1O75531 89 aa12.77□□□□□ -0.37
CSTF3-206ENST00000524827 C1GALT1C1LP0DN25 315 aa12.77□□□□□ -0.37
CSTF3-206ENST00000524827 ZNF10P21506 573 aaPredicted RBP12.77□□□□□ -0.37
CSTF3-206ENST00000524827 PIGAP37287 484 aa12.77□□□□□ -0.37
CSTF3-206ENST00000524827 ASCL1P50553 236 aa12.77□□□□□ -0.37
CSTF3-206ENST00000524827 LIM2P55344 173 aa12.77□□□□□ -0.37
CSTF3-206ENST00000524827 SLBPQ14493 270 aaKnown RBP eCLIP12.77□□□□□ -0.37
CSTF3-206ENST00000524827 TMIGD1Q6UXZ0 262 aa12.77□□□□□ -0.37
CSTF3-206ENST00000524827 SLCO4C1Q6ZQN7 724 aa12.77□□□□□ -0.37
CSTF3-206ENST00000524827 GALNT7Q86SF2 657 aa12.77□□□□□ -0.37
CSTF3-206ENST00000524827 BIVMQ86UB2 503 aa12.77□□□□□ -0.37
CSTF3-206ENST00000524827 ULK2Q8IYT8 1036 aa12.77□□□□□ -0.37
CSTF3-206ENST00000524827 WFDC11Q8NEX6 87 aa12.77□□□□□ -0.37
CSTF3-206ENST00000524827 OR2L5Q8NG80 312 aa12.77□□□□□ -0.37
CSTF3-206ENST00000524827 SLC2A12Q8TD20 617 aa12.77□□□□□ -0.37
CSTF3-206ENST00000524827 RNASE6Q93091 150 aaKnown RBP12.77□□□□□ -0.37
CSTF3-206ENST00000524827 PDLIM5Q96HC4 596 aaKnown RBP12.77□□□□□ -0.37
CSTF3-206ENST00000524827 SMR3AQ99954 134 aa12.77□□□□□ -0.37
CSTF3-206ENST00000524827 ALOXE3Q9BYJ1 711 aa12.77□□□□□ -0.37
CSTF3-206ENST00000524827 ZNF703Q9H7S9 590 aaPredicted RBP12.77□□□□□ -0.37
CSTF3-206ENST00000524827 LZTFL1Q9NQ48 299 aa12.77□□□□□ -0.37
CSTF3-206ENST00000524827 TRMT1Q9NXH9 659 aaKnown RBP12.77□□□□□ -0.37
CSTF3-206ENST00000524827 VTI1BQ9UEU0 232 aa12.77□□□□□ -0.37
CSTF3-206ENST00000524827 DAPP1Q9UN19 280 aa12.77□□□□□ -0.37
CSTF3-206ENST00000524827 VWA7Q9Y334 891 aa12.77□□□□□ -0.37
CSTF3-206ENST00000524827 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.77□□□□□ -0.37
CSTF3-206ENST00000524827 NCKAP5O14513 1909 aa12.77□□□□□ -0.37
CSTF3-206ENST00000524827 HSPB2A8KAH6 182 aa12.76□□□□□ -0.37
CSTF3-206ENST00000524827 C17orf105B2RV13 164 aa12.76□□□□□ -0.37
CSTF3-206ENST00000524827 CDC7O00311 574 aa12.76□□□□□ -0.37
CSTF3-206ENST00000524827 CLEC3AO75596 197 aa12.76□□□□□ -0.37
CSTF3-206ENST00000524827 WDR47O94967 919 aa12.76□□□□□ -0.37
CSTF3-206ENST00000524827 TTC4O95801 387 aa12.76□□□□□ -0.37
CSTF3-206ENST00000524827 TBX6O95947 436 aaPredicted RBP12.76□□□□□ -0.37
CSTF3-206ENST00000524827 RAF1P04049 648 aa12.76□□□□□ -0.37
CSTF3-206ENST00000524827 GNAZP19086 355 aa12.76□□□□□ -0.37
CSTF3-206ENST00000524827 BMP5P22003 454 aa12.76□□□□□ -0.37
CSTF3-206ENST00000524827 STX4Q12846 297 aa12.76□□□□□ -0.37
CSTF3-206ENST00000524827 HSPB2Q16082 182 aa12.76□□□□□ -0.37
CSTF3-206ENST00000524827 DEFB113Q30KQ7 82 aa12.76□□□□□ -0.37
CSTF3-206ENST00000524827 C18orf21Q32NC0 220 aaPredicted RBP12.76□□□□□ -0.37
CSTF3-206ENST00000524827 ADPRMQ3LIE5 342 aa12.76□□□□□ -0.37
CSTF3-206ENST00000524827 SPANXN3Q5MJ09 141 aa12.76□□□□□ -0.37
CSTF3-206ENST00000524827 FAM45BPQ6NSW5 357 aa12.76□□□□□ -0.37
CSTF3-206ENST00000524827 TRIM40Q6P9F5 258 aa12.76□□□□□ -0.37
CSTF3-206ENST00000524827 ADGRD1Q6QNK2 874 aa12.76□□□□□ -0.37
CSTF3-206ENST00000524827 Q71RC1 249 aaPredicted RBP12.76□□□□□ -0.37
CSTF3-206ENST00000524827 VN1R5Q7Z5H4 357 aa12.76□□□□□ -0.37
CSTF3-206ENST00000524827 PPIL6Q8IXY8 311 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms