RNA–Protein interactions for RNA: ENST00000523966.5

SKP1-212, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 899 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-212ENST00000523966 RBBP4Q09028 425 aa3.32□□□□□ -1.88
SKP1-212ENST00000523966 PPP1R8Q12972 351 aaKnown RBP3.32□□□□□ -1.88
SKP1-212ENST00000523966 KIAA0141Q14154 515 aaPredicted RBP3.32□□□□□ -1.88
SKP1-212ENST00000523966 KRT31Q15323 416 aa3.32□□□□□ -1.88
SKP1-212ENST00000523966 STX1AQ16623 288 aa3.32□□□□□ -1.88
SKP1-212ENST00000523966 B3GLCTQ6Y288 498 aa3.32□□□□□ -1.88
SKP1-212ENST00000523966 C3P1Q6ZMU1 363 aa3.32□□□□□ -1.88
SKP1-212ENST00000523966 STXBP4Q6ZWJ1 553 aa3.32□□□□□ -1.88
SKP1-212ENST00000523966 SERPINA12Q8IW75 414 aa3.32□□□□□ -1.88
SKP1-212ENST00000523966 DND1Q8IYX4 353 aaKnown RBP3.32□□□□□ -1.88
SKP1-212ENST00000523966 UBTD2Q8WUN7 234 aa3.32□□□□□ -1.88
SKP1-212ENST00000523966 WBP2Q969T9 261 aa3.32□□□□□ -1.88
SKP1-212ENST00000523966 CNRIP1Q96F85 164 aaPredicted RBP3.32□□□□□ -1.88
SKP1-212ENST00000523966 FAM218AQ96MZ4 157 aa3.32□□□□□ -1.88
SKP1-212ENST00000523966 ANKRD27Q96NW4 1050 aa3.32□□□□□ -1.88
SKP1-212ENST00000523966 IWS1Q96ST2 819 aa3.32□□□□□ -1.88
SKP1-212ENST00000523966 TSPYL1Q9H0U9 437 aa3.32□□□□□ -1.88
SKP1-212ENST00000523966 THAP9Q9H5L6 903 aa3.32□□□□□ -1.88
SKP1-212ENST00000523966 ZDHHC6Q9H6R6 413 aa3.32□□□□□ -1.88
SKP1-212ENST00000523966 ZNF665Q9H7R5 613 aa3.32□□□□□ -1.88
SKP1-212ENST00000523966 DNAJC11Q9NVH1 559 aa3.32□□□□□ -1.88
SKP1-212ENST00000523966 AKAP7Q9P0M2 348 aaPredicted RBP3.32□□□□□ -1.88
SKP1-212ENST00000523966 MDFICQ9P1T7 246 aa3.32□□□□□ -1.88
SKP1-212ENST00000523966 TMEM181Q9P2C4 612 aa3.32□□□□□ -1.88
SKP1-212ENST00000523966 PILRAQ9UKJ1 303 aa3.32□□□□□ -1.88
SKP1-212ENST00000523966 FOXA2Q9Y261 457 aaPredicted RBP3.32□□□□□ -1.88
SKP1-212ENST00000523966 FYCO1Q9BQS8 1478 aa3.32□□□□□ -1.88
SKP1-212ENST00000523966 CTTNBP2Q8WZ74 1663 aa3.32□□□□□ -1.88
SKP1-212ENST00000523966 SMCHD1A6NHR9 2005 aa3.32□□□□□ -1.88
SKP1-212ENST00000523966 ARID2Q68CP9 1835 aa3.31□□□□□ -1.88
SKP1-212ENST00000523966 FHOD3Q2V2M9 1422 aa3.31□□□□□ -1.88
SKP1-212ENST00000523966 GTPBP10A4D1E9 387 aaKnown RBP3.31□□□□□ -1.88
SKP1-212ENST00000523966 H7C423 109 aa3.31□□□□□ -1.88
SKP1-212ENST00000523966 DCXO43602 365 aa3.31□□□□□ -1.88
SKP1-212ENST00000523966 IDH3BO43837 385 aa3.31□□□□□ -1.88
SKP1-212ENST00000523966 ZFAND5O76080 213 aa3.31□□□□□ -1.88
SKP1-212ENST00000523966 ANGPTL1O95841 491 aa3.31□□□□□ -1.88
SKP1-212ENST00000523966 FCGR2BP31994 310 aaPredicted RBP3.31□□□□□ -1.88
SKP1-212ENST00000523966 FCGR2CP31995 323 aa3.31□□□□□ -1.88
SKP1-212ENST00000523966 CAPGP40121 348 aa3.31□□□□□ -1.88
SKP1-212ENST00000523966 NSFP46459 744 aaKnown RBP3.31□□□□□ -1.88
SKP1-212ENST00000523966 CCR4P51679 360 aa3.31□□□□□ -1.88
SKP1-212ENST00000523966 NDST2P52849 883 aa3.31□□□□□ -1.88
SKP1-212ENST00000523966 GSCP56915 257 aaPredicted RBP3.31□□□□□ -1.88
SKP1-212ENST00000523966 EVCP57679 992 aa3.31□□□□□ -1.88
SKP1-212ENST00000523966 TSTA3Q13630 321 aaPredicted RBP3.31□□□□□ -1.88
SKP1-212ENST00000523966 PDE7AQ13946 482 aa3.31□□□□□ -1.88
SKP1-212ENST00000523966 TAF1BQ53T94 588 aaPredicted RBP3.31□□□□□ -1.88
SKP1-212ENST00000523966 C2CD6Q53TS8 623 aa3.31□□□□□ -1.88
SKP1-212ENST00000523966 SLC10A5Q5PT55 438 aa3.31□□□□□ -1.88
SKP1-212ENST00000523966 GSG1LQ6UXU4 331 aa3.31□□□□□ -1.88
SKP1-212ENST00000523966 ZNF410Q86VK4 478 aa3.31□□□□□ -1.88
SKP1-212ENST00000523966 ZFAND4Q86XD8 727 aa3.31□□□□□ -1.88
SKP1-212ENST00000523966 TBC1D10CQ8IV04 446 aa3.31□□□□□ -1.88
SKP1-212ENST00000523966 SIDT2Q8NBJ9 832 aaKnown RBP3.31□□□□□ -1.88
SKP1-212ENST00000523966 LEMD2Q8NC56 503 aa3.31□□□□□ -1.88
SKP1-212ENST00000523966 C8orf46Q8TAG6 207 aa3.31□□□□□ -1.88
SKP1-212ENST00000523966 SPPL2AQ8TCT8 520 aa3.31□□□□□ -1.88
SKP1-212ENST00000523966 GPR148Q8TDV2 347 aa3.31□□□□□ -1.88
SKP1-212ENST00000523966 SAP25Q8TEE9 199 aa3.31□□□□□ -1.88
SKP1-212ENST00000523966 ZNF560Q96MR9 790 aa3.31□□□□□ -1.88
SKP1-212ENST00000523966 ERGIC2Q96RQ1 377 aa3.31□□□□□ -1.88
SKP1-212ENST00000523966 TEX13AQ9BXU3 409 aaPredicted RBP3.31□□□□□ -1.88
SKP1-212ENST00000523966 DDX47Q9H0S4 455 aaKnown RBP3.31□□□□□ -1.88
SKP1-212ENST00000523966 NMUR1Q9HB89 426 aa3.31□□□□□ -1.88
SKP1-212ENST00000523966 PNPLA3Q9NST1 481 aa3.31□□□□□ -1.88
SKP1-212ENST00000523966 PSORS1C1Q9UIG5 152 aa3.31□□□□□ -1.88
SKP1-212ENST00000523966 MOB4Q9Y3A3 225 aa3.31□□□□□ -1.88
SKP1-212ENST00000523966 OR1A2Q9Y585 309 aa3.31□□□□□ -1.88
SKP1-212ENST00000523966 SAMD9Q5K651 1589 aa3.3□□□□□ -1.88
SKP1-212ENST00000523966 CCDC18Q5T9S5 1454 aa3.3□□□□□ -1.88
SKP1-212ENST00000523966 MTUS2Q5JR59 1369 aa3.3□□□□□ -1.88
SKP1-212ENST00000523966 IGKV3D-15A0A087WSY6 115 aa3.3□□□□□ -1.88
SKP1-212ENST00000523966 A0A0J9YWU9 116 aa3.3□□□□□ -1.88
SKP1-212ENST00000523966 ATP6AP2A0A1C7CYW4 349 aa3.3□□□□□ -1.88
SKP1-212ENST00000523966 C5orf51A6NDU8 294 aa3.3□□□□□ -1.88
SKP1-212ENST00000523966 SLC28A1O00337 649 aa3.3□□□□□ -1.88
SKP1-212ENST00000523966 EEF2KO00418 725 aaKnown RBP3.3□□□□□ -1.88
SKP1-212ENST00000523966 P2RX6O15547 441 aa3.3□□□□□ -1.88
SKP1-212ENST00000523966 ZBTB14O43829 449 aa3.3□□□□□ -1.88
SKP1-212ENST00000523966 KIAA0513O60268 411 aa3.3□□□□□ -1.88
SKP1-212ENST00000523966 OLFM2O95897 454 aa3.3□□□□□ -1.88
SKP1-212ENST00000523966 CALCAP01258 141 aa3.3□□□□□ -1.88
SKP1-212ENST00000523966 MMP10P09238 476 aa3.3□□□□□ -1.88
SKP1-212ENST00000523966 NUDT17P0C025 328 aa3.3□□□□□ -1.88
SKP1-212ENST00000523966 AREGP15514 252 aa3.3□□□□□ -1.88
SKP1-212ENST00000523966 CD1DP15813 335 aa3.3□□□□□ -1.88
SKP1-212ENST00000523966 UGT1A6P19224 532 aa3.3□□□□□ -1.88
SKP1-212ENST00000523966 CYP3A5P20815 502 aa3.3□□□□□ -1.88
SKP1-212ENST00000523966 MARCKSP29966 332 aaPredicted RBP3.3□□□□□ -1.88
SKP1-212ENST00000523966 OXTRP30559 389 aa3.3□□□□□ -1.88
SKP1-212ENST00000523966 ALDH3B1P43353 468 aa3.3□□□□□ -1.88
SKP1-212ENST00000523966 GEMP55040 296 aa3.3□□□□□ -1.88
SKP1-212ENST00000523966 BACE1P56817 501 aa3.3□□□□□ -1.88
SKP1-212ENST00000523966 ELAVL2Q12926 359 aaKnown RBP3.3□□□□□ -1.88
SKP1-212ENST00000523966 HEPACAMQ14CZ8 416 aa3.3□□□□□ -1.88
SKP1-212ENST00000523966 ECSCRQ19T08 205 aa3.3□□□□□ -1.88
SKP1-212ENST00000523966 C1orf189Q5VU69 101 aa3.3□□□□□ -1.88
SKP1-212ENST00000523966 METTL7BQ6UX53 244 aa3.3□□□□□ -1.88
SKP1-212ENST00000523966 CDHR3Q6ZTQ4 885 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms