RNA–Protein interactions for RNA: ENST00000523125.5

VEGFA-223, Transcript of vascular endothelial growth factor A, human

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VEGFA-223	ENST00000523125	TSPAN10	Q9H1Z9	355 aa	Predicted RBP	11.53	□□□□□ -0.56
VEGFA-223	ENST00000523125	OR51B5	Q9H339	312 aa		11.53	□□□□□ -0.56
VEGFA-223	ENST00000523125	CDC42EP4	Q9H3Q1	356 aa	Known RBP	11.53	□□□□□ -0.56
VEGFA-223	ENST00000523125	COPS7B	Q9H9Q2	264 aa	Predicted RBP	11.53	□□□□□ -0.56
VEGFA-223	ENST00000523125	ZNF358	Q9NW07	568 aa		11.53	□□□□□ -0.56
VEGFA-223	ENST00000523125	VTI1B	Q9UEU0	232 aa		11.53	□□□□□ -0.56
VEGFA-223	ENST00000523125	MRPS33	Q9Y291	106 aa	Known RBP	11.53	□□□□□ -0.56
VEGFA-223	ENST00000523125	ZNF835	Q9Y2P0	537 aa		11.53	□□□□□ -0.56
VEGFA-223	ENST00000523125	TSC22D4	Q9Y3Q8	395 aa		11.53	□□□□□ -0.56
VEGFA-223	ENST00000523125	FCHO1	O14526	889 aa		11.52	□□□□□ -0.57
VEGFA-223	ENST00000523125	LDB3	O75112	727 aa		11.52	□□□□□ -0.57
VEGFA-223	ENST00000523125	ITGA10	O75578	1167 aa		11.52	□□□□□ -0.57
VEGFA-223	ENST00000523125	SIX3	O95343	332 aa	Predicted RBP	11.52	□□□□□ -0.57
VEGFA-223	ENST00000523125	ACSL3	O95573	720 aa		11.52	□□□□□ -0.57
VEGFA-223	ENST00000523125	SERPINB1	P30740	379 aa		11.52	□□□□□ -0.57
VEGFA-223	ENST00000523125	PIK3CB	P42338	1070 aa		11.52	□□□□□ -0.57
VEGFA-223	ENST00000523125	CA7	P43166	264 aa		11.52	□□□□□ -0.57
VEGFA-223	ENST00000523125	ALDH6A1	Q02252	535 aa	Known RBP	11.52	□□□□□ -0.57
VEGFA-223	ENST00000523125	ZNF800	Q2TB10	664 aa	Predicted RBP eCLIP	11.52	□□□□□ -0.57	2e-13	■□□□□ 10.4
VEGFA-223	ENST00000523125	AP5B1	Q2VPB7	878 aa		11.52	□□□□□ -0.57
VEGFA-223	ENST00000523125	KRTCAP3	Q53RY4	240 aa		11.52	□□□□□ -0.57
VEGFA-223	ENST00000523125	LIPJ	Q5W064	366 aa		11.52	□□□□□ -0.57
VEGFA-223	ENST00000523125	OR4C11	Q6IEV9	310 aa		11.52	□□□□□ -0.57
VEGFA-223	ENST00000523125	C16orf47	Q6ZP98	133 aa	Predicted RBP	11.52	□□□□□ -0.57
VEGFA-223	ENST00000523125	CHSY3	Q70JA7	882 aa		11.52	□□□□□ -0.57
VEGFA-223	ENST00000523125	CHERP	Q8IWX8	916 aa	Known RBP	11.52	□□□□□ -0.57
VEGFA-223	ENST00000523125	TMEM132C	Q8N3T6	1108 aa		11.52	□□□□□ -0.57
VEGFA-223	ENST00000523125	CPSF7	Q8N684	471 aa	Known RBP	11.52	□□□□□ -0.57
VEGFA-223	ENST00000523125	ZNF321P	Q8N8H1	164 aa		11.52	□□□□□ -0.57
VEGFA-223	ENST00000523125	IFT81	Q8WYA0	676 aa		11.52	□□□□□ -0.57
VEGFA-223	ENST00000523125	ZNF592	Q92610	1267 aa		11.52	□□□□□ -0.57
VEGFA-223	ENST00000523125	ANKRD9	Q96BM1	317 aa	Predicted RBP	11.52	□□□□□ -0.57
VEGFA-223	ENST00000523125	FMO2	Q99518	471 aa		11.52	□□□□□ -0.57
VEGFA-223	ENST00000523125	MTERF1	Q99551	399 aa	Known RBP	11.52	□□□□□ -0.57
VEGFA-223	ENST00000523125	ROGDI	Q9GZN7	287 aa		11.52	□□□□□ -0.57
VEGFA-223	ENST00000523125	LIN28A	Q9H9Z2	209 aa	Known RBP	11.52	□□□□□ -0.57
VEGFA-223	ENST00000523125	DMRT3	Q9NQL9	472 aa		11.52	□□□□□ -0.57
VEGFA-223	ENST00000523125	MTRF1L	Q9UGC7	380 aa	Known RBP	11.52	□□□□□ -0.57
VEGFA-223	ENST00000523125	FBXW2	Q9UKT8	454 aa		11.52	□□□□□ -0.57
VEGFA-223	ENST00000523125	ADGRG4	Q8IZF6	3080 aa		11.52	□□□□□ -0.57
VEGFA-223	ENST00000523125	ZNF407	Q9C0G0	2248 aa		11.52	□□□□□ -0.57
VEGFA-223	ENST00000523125	APC	P25054	2843 aa		11.52	□□□□□ -0.57
VEGFA-223	ENST00000523125	NCKAP5	O14513	1909 aa		11.51	□□□□□ -0.57
VEGFA-223	ENST00000523125	TRGV8	A0A0C4DH27	118 aa		11.51	□□□□□ -0.57
VEGFA-223	ENST00000523125	NPIPA5	E9PKD4	350 aa		11.51	□□□□□ -0.57
VEGFA-223	ENST00000523125		H0YIV9	168 aa		11.51	□□□□□ -0.57
VEGFA-223	ENST00000523125	CCL21	O00585	134 aa		11.51	□□□□□ -0.57
VEGFA-223	ENST00000523125	PLPP1	O14494	284 aa		11.51	□□□□□ -0.57
VEGFA-223	ENST00000523125	ASNA1	O43681	348 aa		11.51	□□□□□ -0.57
VEGFA-223	ENST00000523125	SLC19A2	O60779	497 aa		11.51	□□□□□ -0.57
VEGFA-223	ENST00000523125	ZFAND5	O76080	213 aa		11.51	□□□□□ -0.57
VEGFA-223	ENST00000523125	IFNA16	P05015	189 aa		11.51	□□□□□ -0.57
VEGFA-223	ENST00000523125	GFAP	P14136	432 aa		11.51	□□□□□ -0.57
VEGFA-223	ENST00000523125	IGLV3-21	P80748	117 aa	Predicted RBP	11.51	□□□□□ -0.57
VEGFA-223	ENST00000523125	SLAMF1	Q13291	335 aa		11.51	□□□□□ -0.57
VEGFA-223	ENST00000523125	DDX39B	Q13838	428 aa	Known RBP	11.51	□□□□□ -0.57
VEGFA-223	ENST00000523125	GTF2H2	Q13888	395 aa		11.51	□□□□□ -0.57
VEGFA-223	ENST00000523125	RCN2	Q14257	317 aa		11.51	□□□□□ -0.57
VEGFA-223	ENST00000523125	GTF2H2C	Q6P1K8	395 aa		11.51	□□□□□ -0.57
VEGFA-223	ENST00000523125		Q6ZPB1	254 aa	Predicted RBP	11.51	□□□□□ -0.57
VEGFA-223	ENST00000523125	CEP128	Q6ZU80	1094 aa		11.51	□□□□□ -0.57
VEGFA-223	ENST00000523125	MDGA2	Q7Z553	956 aa		11.51	□□□□□ -0.57
VEGFA-223	ENST00000523125	GOLGA7	Q7Z5G4	137 aa		11.51	□□□□□ -0.57
VEGFA-223	ENST00000523125	L3MBTL4	Q8NA19	623 aa		11.51	□□□□□ -0.57
VEGFA-223	ENST00000523125	MORN4	Q8NDC4	146 aa		11.51	□□□□□ -0.57
VEGFA-223	ENST00000523125	DCAKD	Q8WVC6	231 aa		11.51	□□□□□ -0.57
VEGFA-223	ENST00000523125	ITLN2	Q8WWU7	325 aa	Predicted RBP	11.51	□□□□□ -0.57
VEGFA-223	ENST00000523125	RGMA	Q96B86	450 aa		11.51	□□□□□ -0.57
VEGFA-223	ENST00000523125	CCDC120	Q96HB5	630 aa		11.51	□□□□□ -0.57
VEGFA-223	ENST00000523125	PAFAH2	Q99487	392 aa		11.51	□□□□□ -0.57
VEGFA-223	ENST00000523125	ZNF717	Q9BY31	904 aa	Predicted RBP	11.51	□□□□□ -0.57
VEGFA-223	ENST00000523125	TSPYL1	Q9H0U9	437 aa		11.51	□□□□□ -0.57
VEGFA-223	ENST00000523125	VPS11	Q9H270	941 aa		11.51	□□□□□ -0.57
VEGFA-223	ENST00000523125	IPPK	Q9H8X2	491 aa		11.51	□□□□□ -0.57
VEGFA-223	ENST00000523125	CPSF2	Q9P2I0	782 aa	Known RBP	11.51	□□□□□ -0.57
VEGFA-223	ENST00000523125	ADGRE2	Q9UHX3	823 aa		11.51	□□□□□ -0.57
VEGFA-223	ENST00000523125	NPIPA1	Q9UND3	350 aa		11.51	□□□□□ -0.57
VEGFA-223	ENST00000523125	YARS2	Q9Y2Z4	477 aa	Known RBP	11.51	□□□□□ -0.57
VEGFA-223	ENST00000523125	RNF11	Q9Y3C5	154 aa		11.51	□□□□□ -0.57
VEGFA-223	ENST00000523125	ANGPTL3	Q9Y5C1	460 aa		11.51	□□□□□ -0.57
VEGFA-223	ENST00000523125	PCDHGA11	Q9Y5H2	935 aa		11.51	□□□□□ -0.57
VEGFA-223	ENST00000523125	CLCA3P	Q9Y6N3	262 aa		11.51	□□□□□ -0.57
VEGFA-223	ENST00000523125	DNAJC13	O75165	2243 aa		11.51	□□□□□ -0.57
VEGFA-223	ENST00000523125	CACNA1C	Q13936	2221 aa		11.51	□□□□□ -0.57
VEGFA-223	ENST00000523125	NOTCH2	Q04721	2471 aa		11.5	□□□□□ -0.57
VEGFA-223	ENST00000523125	SYNDIG1L	A6NDD5	238 aa		11.5	□□□□□ -0.57
VEGFA-223	ENST00000523125	OR7A17	O14581	309 aa		11.5	□□□□□ -0.57
VEGFA-223	ENST00000523125	ZNHIT1	O43257	154 aa		11.5	□□□□□ -0.57
VEGFA-223	ENST00000523125	FGF17	O60258	216 aa		11.5	□□□□□ -0.57
VEGFA-223	ENST00000523125	UGDH	O60701	494 aa		11.5	□□□□□ -0.57
VEGFA-223	ENST00000523125	OR2J2	O76002	312 aa		11.5	□□□□□ -0.57
VEGFA-223	ENST00000523125	ETHE1	O95571	254 aa		11.5	□□□□□ -0.57
VEGFA-223	ENST00000523125	INHBA	P08476	426 aa		11.5	□□□□□ -0.57
VEGFA-223	ENST00000523125	CPN2	P22792	545 aa		11.5	□□□□□ -0.57
VEGFA-223	ENST00000523125	SSR2	P43308	183 aa		11.5	□□□□□ -0.57
VEGFA-223	ENST00000523125	HNRNPH2	P55795	449 aa	Known RBP	11.5	□□□□□ -0.57
VEGFA-223	ENST00000523125	RPS13	P62277	151 aa	Known RBP	11.5	□□□□□ -0.57
VEGFA-223	ENST00000523125	ID2	Q02363	134 aa		11.5	□□□□□ -0.57
VEGFA-223	ENST00000523125	RBPJ	Q06330	500 aa		11.5	□□□□□ -0.57
VEGFA-223	ENST00000523125	STX4	Q12846	297 aa		11.5	□□□□□ -0.57

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