RNA–Protein interactions for RNA: ENST00000521327.1

SPARC-203, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 2

Gene SPARC, Length 864 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-203ENST00000521327 SYT5O00445 386 aa12.53□□□□□ -0.4
SPARC-203ENST00000521327 CYR61O00622 381 aa12.53□□□□□ -0.4
SPARC-203ENST00000521327 H2AFYO75367 372 aaKnown RBP12.53□□□□□ -0.4
SPARC-203ENST00000521327 P04436 131 aa12.53□□□□□ -0.4
SPARC-203ENST00000521327 CCL3P10147 92 aa12.53□□□□□ -0.4
SPARC-203ENST00000521327 TNNI3P19429 210 aa12.53□□□□□ -0.4
SPARC-203ENST00000521327 HYAL4Q2M3T9 481 aa12.53□□□□□ -0.4
SPARC-203ENST00000521327 BBS9Q3SYG4 887 aa12.53□□□□□ -0.4
SPARC-203ENST00000521327 RIPPLY2Q5TAB7 128 aa12.53□□□□□ -0.4
SPARC-203ENST00000521327 TMIGD1Q6UXZ0 262 aa12.53□□□□□ -0.4
SPARC-203ENST00000521327 GOLM1Q8NBJ4 401 aa12.53□□□□□ -0.4
SPARC-203ENST00000521327 MORN4Q8NDC4 146 aa12.53□□□□□ -0.4
SPARC-203ENST00000521327 PPANQ9NQ55 473 aaKnown RBP12.53□□□□□ -0.4
SPARC-203ENST00000521327 VTI1BQ9UEU0 232 aa12.53□□□□□ -0.4
SPARC-203ENST00000521327 ZNF407Q9C0G0 2248 aa12.53□□□□□ -0.4
SPARC-203ENST00000521327 A0A088AWK7 358 aa12.52□□□□□ -0.41
SPARC-203ENST00000521327 TRGV5A0A0B4J1U4 118 aa12.52□□□□□ -0.41
SPARC-203ENST00000521327 A6NNC1 897 aa12.52□□□□□ -0.41
SPARC-203ENST00000521327 HCN1O60741 890 aa12.52□□□□□ -0.41
SPARC-203ENST00000521327 CTNSO60931 367 aa12.52□□□□□ -0.41
SPARC-203ENST00000521327 BANF1O75531 89 aa12.52□□□□□ -0.41
SPARC-203ENST00000521327 C1GALT1C1LP0DN25 315 aa12.52□□□□□ -0.41
SPARC-203ENST00000521327 GABRA1P14867 456 aa12.52□□□□□ -0.41
SPARC-203ENST00000521327 ENDOUP21128 410 aaKnown RBP12.52□□□□□ -0.41
SPARC-203ENST00000521327 ZNF10P21506 573 aaPredicted RBP12.52□□□□□ -0.41
SPARC-203ENST00000521327 PIGAP37287 484 aa12.52□□□□□ -0.41
SPARC-203ENST00000521327 GDF5P43026 501 aa12.52□□□□□ -0.41
SPARC-203ENST00000521327 LIM2P55344 173 aa12.52□□□□□ -0.41
SPARC-203ENST00000521327 RNF4P78317 190 aa12.52□□□□□ -0.41
SPARC-203ENST00000521327 STX4Q12846 297 aa12.52□□□□□ -0.41
SPARC-203ENST00000521327 SLBPQ14493 270 aaKnown RBP eCLIP12.52□□□□□ -0.41
SPARC-203ENST00000521327 PPP1R3AQ16821 1122 aa12.52□□□□□ -0.41
SPARC-203ENST00000521327 OPN5Q6U736 354 aa12.52□□□□□ -0.41
SPARC-203ENST00000521327 SLCO4C1Q6ZQN7 724 aa12.52□□□□□ -0.41
SPARC-203ENST00000521327 Q71RC1 249 aaPredicted RBP12.52□□□□□ -0.41
SPARC-203ENST00000521327 CNTN4Q8IWV2 1026 aa12.52□□□□□ -0.41
SPARC-203ENST00000521327 TTLQ8NG68 377 aa12.52□□□□□ -0.41
SPARC-203ENST00000521327 OR5L2Q8NGL0 311 aa12.52□□□□□ -0.41
SPARC-203ENST00000521327 OR14A16Q8NHC5 309 aa12.52□□□□□ -0.41
SPARC-203ENST00000521327 PDLIM5Q96HC4 596 aaKnown RBP12.52□□□□□ -0.41
SPARC-203ENST00000521327 QRFPRQ96P65 431 aa12.52□□□□□ -0.41
SPARC-203ENST00000521327 CSF3RQ99062 836 aa12.52□□□□□ -0.41
SPARC-203ENST00000521327 EGFL8Q99944 293 aa12.52□□□□□ -0.41
SPARC-203ENST00000521327 SPRR3Q9UBC9 169 aa12.52□□□□□ -0.41
SPARC-203ENST00000521327 B4GALT7Q9UBV7 327 aa12.52□□□□□ -0.41
SPARC-203ENST00000521327 ATG4BQ9Y4P1 393 aa12.52□□□□□ -0.41
SPARC-203ENST00000521327 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.52□□□□□ -0.41
SPARC-203ENST00000521327 DNAJC13O75165 2243 aa12.52□□□□□ -0.41
SPARC-203ENST00000521327 HSPB2A8KAH6 182 aa12.51□□□□□ -0.41
SPARC-203ENST00000521327 C17orf105B2RV13 164 aa12.51□□□□□ -0.41
SPARC-203ENST00000521327 CDC7O00311 574 aa12.51□□□□□ -0.41
SPARC-203ENST00000521327 TTC4O95801 387 aa12.51□□□□□ -0.41
SPARC-203ENST00000521327 GNAZP19086 355 aa12.51□□□□□ -0.41
SPARC-203ENST00000521327 BMP5P22003 454 aa12.51□□□□□ -0.41
SPARC-203ENST00000521327 CERS1P27544 350 aa12.51□□□□□ -0.41
SPARC-203ENST00000521327 PEX19P40855 299 aa12.51□□□□□ -0.41
SPARC-203ENST00000521327 LTBQ06643 244 aa12.51□□□□□ -0.41
SPARC-203ENST00000521327 RCN2Q14257 317 aa12.51□□□□□ -0.41
SPARC-203ENST00000521327 EFTUD2Q15029 972 aaKnown RBP eCLIP12.51□□□□□ -0.41
SPARC-203ENST00000521327 HSPB2Q16082 182 aa12.51□□□□□ -0.41
SPARC-203ENST00000521327 C18orf21Q32NC0 220 aaPredicted RBP12.51□□□□□ -0.41
SPARC-203ENST00000521327 FLYWCH1Q4VC44 716 aa12.51□□□□□ -0.41
SPARC-203ENST00000521327 SPANXN3Q5MJ09 141 aa12.51□□□□□ -0.41
SPARC-203ENST00000521327 TEDDM1Q5T9Z0 273 aa12.51□□□□□ -0.41
SPARC-203ENST00000521327 CCDC137Q6PK04 289 aaKnown RBP12.51□□□□□ -0.41
SPARC-203ENST00000521327 CAMKMTQ7Z624 323 aa12.51□□□□□ -0.41
SPARC-203ENST00000521327 PPIL6Q8IXY8 311 aa12.51□□□□□ -0.41
SPARC-203ENST00000521327 WFDC11Q8NEX6 87 aa12.51□□□□□ -0.41
SPARC-203ENST00000521327 OR2L5Q8NG80 312 aa12.51□□□□□ -0.41
SPARC-203ENST00000521327 OR8K3Q8NH51 312 aa12.51□□□□□ -0.41
SPARC-203ENST00000521327 SLC2A12Q8TD20 617 aa12.51□□□□□ -0.41
SPARC-203ENST00000521327 FAM222BQ8WU58 562 aa12.51□□□□□ -0.41
SPARC-203ENST00000521327 MBD6Q96DN6 1003 aa12.51□□□□□ -0.41
SPARC-203ENST00000521327 MS4A14Q96JA4 679 aa12.51□□□□□ -0.41
SPARC-203ENST00000521327 SERINC2Q96SA4 455 aa12.51□□□□□ -0.41
SPARC-203ENST00000521327 SMR3AQ99954 134 aa12.51□□□□□ -0.41
SPARC-203ENST00000521327 REXO4Q9GZR2 422 aaKnown RBP12.51□□□□□ -0.41
SPARC-203ENST00000521327 DMRT3Q9NQL9 472 aa12.51□□□□□ -0.41
SPARC-203ENST00000521327 TRMT1Q9NXH9 659 aaKnown RBP12.51□□□□□ -0.41
SPARC-203ENST00000521327 CBLCQ9ULV8 474 aa12.51□□□□□ -0.41
SPARC-203ENST00000521327 DAPP1Q9UN19 280 aa12.51□□□□□ -0.41
SPARC-203ENST00000521327 FLNAP21333 2647 aaKnown RBP12.51□□□□□ -0.41
SPARC-203ENST00000521327 VPS13CQ709C8 3753 aa12.5□□□□□ -0.41
SPARC-203ENST00000521327 SYNDIG1LA6NDD5 238 aa12.5□□□□□ -0.41
SPARC-203ENST00000521327 NPEPPSL1A6NEC2 478 aa12.5□□□□□ -0.41
SPARC-203ENST00000521327 ANKDD1BA6NHY2 528 aa12.5□□□□□ -0.41
SPARC-203ENST00000521327 LDB3O75112 727 aa12.5□□□□□ -0.41
SPARC-203ENST00000521327 CLEC3AO75596 197 aa12.5□□□□□ -0.41
SPARC-203ENST00000521327 WDR47O94967 919 aa12.5□□□□□ -0.41
SPARC-203ENST00000521327 ETHE1O95571 254 aa12.5□□□□□ -0.41
SPARC-203ENST00000521327 TBX6O95947 436 aaPredicted RBP12.5□□□□□ -0.41
SPARC-203ENST00000521327 RFPL3SP0C7P2 107 aa12.5□□□□□ -0.41
SPARC-203ENST00000521327 MTTPP55157 894 aa12.5□□□□□ -0.41
SPARC-203ENST00000521327 ID2Q02363 134 aa12.5□□□□□ -0.41
SPARC-203ENST00000521327 ASPHQ12797 758 aa12.5□□□□□ -0.41
SPARC-203ENST00000521327 MSS51Q4VC12 460 aa12.5□□□□□ -0.41
SPARC-203ENST00000521327 PIGGQ5H8A4 983 aa12.5□□□□□ -0.41
SPARC-203ENST00000521327 RNASEH2BQ5TBB1 312 aaKnown RBP12.5□□□□□ -0.41
SPARC-203ENST00000521327 FBXW10Q5XX13 1052 aa12.5□□□□□ -0.41
SPARC-203ENST00000521327 SLC22A10Q63ZE4 541 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms