RNA–Protein interactions for RNA: ENST00000520168.5

SDCBP-207, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-207ENST00000520168 PRDX1Q06830 199 aaKnown RBP4.52□□□□□ -1.69
SDCBP-207ENST00000520168 MSLNQ13421 630 aaPredicted RBP4.52□□□□□ -1.69
SDCBP-207ENST00000520168 SLC10A1Q14973 349 aa4.52□□□□□ -1.69
SDCBP-207ENST00000520168 HERC3Q15034 1050 aa4.52□□□□□ -1.69
SDCBP-207ENST00000520168 SIX1Q15475 284 aaPredicted RBP4.52□□□□□ -1.69
SDCBP-207ENST00000520168 ACKR1Q16570 336 aa4.52□□□□□ -1.69
SDCBP-207ENST00000520168 WHAMMP3Q1A5X7 153 aa4.52□□□□□ -1.69
SDCBP-207ENST00000520168 ANKRD20A4Q4UJ75 823 aa4.52□□□□□ -1.69
SDCBP-207ENST00000520168 CCDC38Q502W7 563 aa4.52□□□□□ -1.69
SDCBP-207ENST00000520168 AARS2Q5JTZ9 985 aaKnown RBP4.52□□□□□ -1.69
SDCBP-207ENST00000520168 ANKRD20A2Q5SQ80 823 aa4.52□□□□□ -1.69
SDCBP-207ENST00000520168 ANKRD20A1Q5TYW2 823 aa4.52□□□□□ -1.69
SDCBP-207ENST00000520168 LRRC38Q5VT99 294 aa4.52□□□□□ -1.69
SDCBP-207ENST00000520168 ANKRD20A3Q5VUR7 823 aa4.52□□□□□ -1.69
SDCBP-207ENST00000520168 NPNTQ6UXI9 565 aa4.52□□□□□ -1.69
SDCBP-207ENST00000520168 H2AFVQ71UI9 128 aa4.52□□□□□ -1.69
SDCBP-207ENST00000520168 MDGA2Q7Z553 956 aa4.52□□□□□ -1.69
SDCBP-207ENST00000520168 KIAA1328Q86T90 577 aa4.52□□□□□ -1.69
SDCBP-207ENST00000520168 SLC26A11Q86WA9 606 aa4.52□□□□□ -1.69
SDCBP-207ENST00000520168 GALNT12Q8IXK2 581 aa4.52□□□□□ -1.69
SDCBP-207ENST00000520168 PIANPQ8IYJ0 282 aa4.52□□□□□ -1.69
SDCBP-207ENST00000520168 PM20D2Q8IYS1 436 aa4.52□□□□□ -1.69
SDCBP-207ENST00000520168 ULK2Q8IYT8 1036 aa4.52□□□□□ -1.69
SDCBP-207ENST00000520168 CAMKVQ8NCB2 501 aa4.52□□□□□ -1.69
SDCBP-207ENST00000520168 B3GNT7Q8NFL0 401 aa4.52□□□□□ -1.69
SDCBP-207ENST00000520168 LINC01560Q8TB33 94 aa4.52□□□□□ -1.69
SDCBP-207ENST00000520168 GIMAP1Q8WWP7 306 aa4.52□□□□□ -1.69
SDCBP-207ENST00000520168 ASB15Q8WXK1 588 aa4.52□□□□□ -1.69
SDCBP-207ENST00000520168 SMPDL3AQ92484 453 aa4.52□□□□□ -1.69
SDCBP-207ENST00000520168 SGCZQ96LD1 299 aa4.52□□□□□ -1.69
SDCBP-207ENST00000520168 ZFP3Q96NJ6 502 aa4.52□□□□□ -1.69
SDCBP-207ENST00000520168 QKIQ96PU8 341 aaKnown RBP eCLIP4.52□□□□□ -1.69
SDCBP-207ENST00000520168 CHP1Q99653 195 aa4.52□□□□□ -1.69
SDCBP-207ENST00000520168 NAPGQ99747 312 aaPredicted RBP4.52□□□□□ -1.69
SDCBP-207ENST00000520168 TBL1YQ9BQ87 522 aa4.52□□□□□ -1.69
SDCBP-207ENST00000520168 CCDC77Q9BR77 488 aa4.52□□□□□ -1.69
SDCBP-207ENST00000520168 DESI2Q9BSY9 194 aa4.52□□□□□ -1.69
SDCBP-207ENST00000520168 EXO5Q9H790 373 aa4.52□□□□□ -1.69
SDCBP-207ENST00000520168 CLK4Q9HAZ1 481 aaKnown RBP4.52□□□□□ -1.69
SDCBP-207ENST00000520168 LZTFL1Q9NQ48 299 aa4.52□□□□□ -1.69
SDCBP-207ENST00000520168 FAM114A2Q9NRY5 505 aa4.52□□□□□ -1.69
SDCBP-207ENST00000520168 DCAF16Q9NXF7 216 aa4.52□□□□□ -1.69
SDCBP-207ENST00000520168 QPCTLQ9NXS2 382 aa4.52□□□□□ -1.69
SDCBP-207ENST00000520168 ZNF226Q9NYT6 803 aa4.52□□□□□ -1.69
SDCBP-207ENST00000520168 JKAMPQ9P055 326 aa4.52□□□□□ -1.69
SDCBP-207ENST00000520168 SAMD15Q9P1V8 674 aa4.52□□□□□ -1.69
SDCBP-207ENST00000520168 HCN3Q9P1Z3 774 aa4.52□□□□□ -1.69
SDCBP-207ENST00000520168 CTTNBP2NLQ9P2B4 639 aa4.52□□□□□ -1.69
SDCBP-207ENST00000520168 PCYOX1Q9UHG3 505 aa4.52□□□□□ -1.69
SDCBP-207ENST00000520168 INTUQ9ULD6 942 aa4.52□□□□□ -1.69
SDCBP-207ENST00000520168 TTC7AQ9ULT0 858 aaPredicted RBP4.52□□□□□ -1.69
SDCBP-207ENST00000520168 SLC22A7Q9Y694 548 aa4.52□□□□□ -1.69
SDCBP-207ENST00000520168 PRSS21Q9Y6M0 314 aa4.52□□□□□ -1.69
SDCBP-207ENST00000520168 PKD1L1Q8TDX9 2849 aa4.52□□□□□ -1.69
SDCBP-207ENST00000520168 ABCA1O95477 2261 aa4.51□□□□□ -1.69
SDCBP-207ENST00000520168 IGKV1-8A0A0C4DH67 115 aa4.51□□□□□ -1.69
SDCBP-207ENST00000520168 A0A1W2PPR1 153 aa4.51□□□□□ -1.69
SDCBP-207ENST00000520168 TCRBV16S1A1N1A0A5B0 115 aa4.51□□□□□ -1.69
SDCBP-207ENST00000520168 P2RX6O15547 441 aa4.51□□□□□ -1.69
SDCBP-207ENST00000520168 ATP8B1O43520 1251 aa4.51□□□□□ -1.69
SDCBP-207ENST00000520168 SPRY1O43609 319 aaPredicted RBP4.51□□□□□ -1.69
SDCBP-207ENST00000520168 AKR1B10O60218 316 aa4.51□□□□□ -1.69
SDCBP-207ENST00000520168 NRP2O60462 931 aa4.51□□□□□ -1.69
SDCBP-207ENST00000520168 CST8O60676 142 aa4.51□□□□□ -1.69
SDCBP-207ENST00000520168 CDC123O75794 336 aaPredicted RBP4.51□□□□□ -1.69
SDCBP-207ENST00000520168 SOX30O94993 753 aa4.51□□□□□ -1.69
SDCBP-207ENST00000520168 KRT1P04264 644 aa4.51□□□□□ -1.69
SDCBP-207ENST00000520168 P04436 131 aa4.51□□□□□ -1.69
SDCBP-207ENST00000520168 SLC35G6P0C7Q6 338 aa4.51□□□□□ -1.69
SDCBP-207ENST00000520168 NAT2P11245 290 aa4.51□□□□□ -1.69
SDCBP-207ENST00000520168 CHRM3P20309 590 aa4.51□□□□□ -1.69
SDCBP-207ENST00000520168 CNR1P21554 472 aa4.51□□□□□ -1.69
SDCBP-207ENST00000520168 CTSSP25774 331 aa4.51□□□□□ -1.69
SDCBP-207ENST00000520168 AOAHP28039 575 aa4.51□□□□□ -1.69
SDCBP-207ENST00000520168 ATP5DP30049 168 aa4.51□□□□□ -1.69
SDCBP-207ENST00000520168 FOXN2P32314 431 aa4.51□□□□□ -1.69
SDCBP-207ENST00000520168 ST13P50502 369 aaKnown RBP4.51□□□□□ -1.69
SDCBP-207ENST00000520168 TPD52P55327 224 aaPredicted RBP4.51□□□□□ -1.69
SDCBP-207ENST00000520168 DYNLT1P63172 113 aa4.51□□□□□ -1.69
SDCBP-207ENST00000520168 EEF1A1P68104 462 aaKnown RBP4.51□□□□□ -1.69
SDCBP-207ENST00000520168 KRTAP1-1Q07627 177 aa4.51□□□□□ -1.69
SDCBP-207ENST00000520168 KIF5AQ12840 1032 aa4.51□□□□□ -1.69
SDCBP-207ENST00000520168 COX10Q12887 443 aa4.51□□□□□ -1.69
SDCBP-207ENST00000520168 POU4F3Q15319 338 aa4.51□□□□□ -1.69
SDCBP-207ENST00000520168 PHKG1Q16816 387 aa4.51□□□□□ -1.69
SDCBP-207ENST00000520168 WIPI1Q5MNZ9 446 aaPredicted RBP4.51□□□□□ -1.69
SDCBP-207ENST00000520168 C10orf62Q5T681 223 aaPredicted RBP4.51□□□□□ -1.69
SDCBP-207ENST00000520168 EEF1A1P5Q5VTE0 462 aa4.51□□□□□ -1.69
SDCBP-207ENST00000520168 ALKBH5Q6P6C2 394 aaKnown RBP4.51□□□□□ -1.69
SDCBP-207ENST00000520168 AFTPHQ6ULP2 937 aa4.51□□□□□ -1.69
SDCBP-207ENST00000520168 SCIMPQ6UWF3 145 aa4.51□□□□□ -1.69
SDCBP-207ENST00000520168 RTL4Q6ZR62 310 aa4.51□□□□□ -1.69
SDCBP-207ENST00000520168 OTOAQ7RTW8 1153 aa4.51□□□□□ -1.69
SDCBP-207ENST00000520168 ADCK2Q7Z695 626 aa4.51□□□□□ -1.69
SDCBP-207ENST00000520168 MILR1Q7Z6M3 343 aa4.51□□□□□ -1.69
SDCBP-207ENST00000520168 CAND1Q86VP6 1230 aaKnown RBP4.51□□□□□ -1.69
SDCBP-207ENST00000520168 LRRC6Q86X45 466 aa4.51□□□□□ -1.69
SDCBP-207ENST00000520168 VRK3Q8IV63 474 aa4.51□□□□□ -1.69
SDCBP-207ENST00000520168 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.51□□□□□ -1.69
SDCBP-207ENST00000520168 LIX1Q8N485 282 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms